RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 CERKLQ49MI3 558 aaPredicted RBP17.52■□□□□ 0.4
HOXD3-202ENST00000410016 SFMBT2Q5VUG0 894 aa17.52■□□□□ 0.4
HOXD3-202ENST00000410016 POTEGQ6S5H5 508 aa17.52■□□□□ 0.4
HOXD3-202ENST00000410016 POTEEQ6S8J3 1075 aa17.52■□□□□ 0.4
HOXD3-202ENST00000410016 LENG9Q96B70 501 aa17.52■□□□□ 0.4
HOXD3-202ENST00000410016 GDAP1L1Q96MZ0 367 aa17.52■□□□□ 0.4
HOXD3-202ENST00000410016 SELENOOQ9BVL4 669 aa17.52■□□□□ 0.4
HOXD3-202ENST00000410016 DMGDHQ9UI17 866 aaKnown RBP17.52■□□□□ 0.4
HOXD3-202ENST00000410016 HYOU1Q9Y4L1 999 aa17.52■□□□□ 0.4
HOXD3-202ENST00000410016 ARFGEF1Q9Y6D6 1849 aa17.52■□□□□ 0.4
HOXD3-202ENST00000410016 ANKRD31Q8N7Z5 1873 aa17.52■□□□□ 0.4
HOXD3-202ENST00000410016 SPATA31C1P0DKV0 1188 aa17.52■□□□□ 0.39
HOXD3-202ENST00000410016 PSMC6P62333 389 aa17.52■□□□□ 0.39
HOXD3-202ENST00000410016 AP3B2Q13367 1082 aa17.52■□□□□ 0.39
HOXD3-202ENST00000410016 ADAM9Q13443 819 aa17.52■□□□□ 0.39
HOXD3-202ENST00000410016 EDRF1Q3B7T1 1238 aa17.52■□□□□ 0.39
HOXD3-202ENST00000410016 TATDN1Q6P1N9 297 aa17.52■□□□□ 0.39
HOXD3-202ENST00000410016 IPO4Q8TEX9 1081 aaKnown RBP17.52■□□□□ 0.39
HOXD3-202ENST00000410016 AENQ8WTP8 325 aaKnown RBP17.52■□□□□ 0.39
HOXD3-202ENST00000410016 LSM14BQ9BX40 385 aaKnown RBP17.52■□□□□ 0.39
HOXD3-202ENST00000410016 PI4KBQ9UBF8 816 aa17.52■□□□□ 0.39
HOXD3-202ENST00000410016 MYH10P35580 1976 aa17.52■□□□□ 0.39
HOXD3-202ENST00000410016 NCK2O43639 380 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 RAD21O60216 631 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 ALDH1B1P30837 517 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 ACTN2P35609 894 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 TNNT3P45378 269 aaPredicted RBP17.51■□□□□ 0.39
HOXD3-202ENST00000410016 CASP5P51878 434 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 TDRD12Q587J7 1177 aaKnown RBP17.51■□□□□ 0.39
HOXD3-202ENST00000410016 PODNQ7Z5L7 613 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 BBXQ8WY36 941 aaPredicted RBP17.51■□□□□ 0.39
HOXD3-202ENST00000410016 NOX5Q96PH1 765 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 PSMB7Q99436 277 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 HINFPQ9BQA5 517 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 IDI2Q9BXS1 227 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 AIPL1Q9NZN9 384 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 FAM184BQ9ULE4 1060 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 AGPSO00116 658 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 GIT2Q14161 759 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 Q4G0T1 1027 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 DPY19L2P1Q6NXN4 242 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 GOLGA5Q8TBA6 731 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 SMARCAL1Q9NZC9 954 aa17.51■□□□□ 0.39
HOXD3-202ENST00000410016 TBX3O15119 743 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 BUB1O43683 1085 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 RNF40O75150 1001 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 TRIM37O94972 964 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 HOXD13P35453 343 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 PRR16Q569H4 304 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 PPP4R3CPQ6ZMV5 832 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 KIAA0825Q8IV33 1275 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 GANQ9H2C0 597 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 DBNDD1Q9H9R9 158 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 EHD2Q9NZN4 543 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 TRPC5Q9UL62 973 aaPredicted RBP17.5■□□□□ 0.39
HOXD3-202ENST00000410016 FAM86B1E9PN63 330 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 F5H6K3 240 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 FAM86B2P0C5J1 330 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 RPA1P27694 616 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 SNAP25P60880 206 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 KLRC3Q07444 240 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 KCNH2Q12809 1159 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 SLC18A3Q16572 532 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 MEX3CQ5U5Q3 659 aaKnown RBP17.5■□□□□ 0.39
HOXD3-202ENST00000410016 HAUS3Q68CZ6 603 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 SYT2Q8N9I0 419 aaPredicted RBP17.5■□□□□ 0.39
HOXD3-202ENST00000410016 RUBCNQ92622 972 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 AMNQ9BXJ7 453 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 FAM204AQ9H8W3 233 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 TRAF3IP3Q9Y228 551 aa17.5■□□□□ 0.39
HOXD3-202ENST00000410016 SIPA1L1O43166 1804 aa17.49■□□□□ 0.39
HOXD3-202ENST00000410016 CAPN2P17655 700 aa17.49■□□□□ 0.39
HOXD3-202ENST00000410016 MMP14P50281 582 aa17.49■□□□□ 0.39
HOXD3-202ENST00000410016 NAB2Q15742 525 aa17.49■□□□□ 0.39
HOXD3-202ENST00000410016 EPM2AIP1Q7L775 607 aaPredicted RBP17.49■□□□□ 0.39
HOXD3-202ENST00000410016 RIN2Q8WYP3 895 aaPredicted RBP17.49■□□□□ 0.39
HOXD3-202ENST00000410016 TBC1D5Q92609 795 aa17.49■□□□□ 0.39
HOXD3-202ENST00000410016 A0A087X0T9 212 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 G3V3G9 751 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 CETN3O15182 167 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 FAM228BP0C875 321 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 GGCXP38435 758 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 DCAF8Q5TAQ9 597 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 CCDC70Q6NSX1 233 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 NLGN1Q8N2Q7 840 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 MEIS1O00470 390 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 KRT18P05783 430 aaKnown RBP17.48■□□□□ 0.39
HOXD3-202ENST00000410016 NR2F2P24468 414 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 KLRC1P26715 233 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 SREBF1P36956 1147 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 MRPS25P82663 173 aaKnown RBP17.48■□□□□ 0.39
HOXD3-202ENST00000410016 ICA1Q05084 483 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 PABPC4Q13310 644 aaKnown RBP eCLIP17.48■□□□□ 0.39
HOXD3-202ENST00000410016 GMCL1P1Q8NEA9 526 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 REEP2Q9BRK0 252 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 ZHX3Q9H4I2 956 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 DNM3Q9UQ16 869 aa17.48■□□□□ 0.39
HOXD3-202ENST00000410016 GOLGB1Q14789 3259 aaKnown RBP17.48■□□□□ 0.39
HOXD3-202ENST00000410016 TULP2O00295 520 aa17.47■□□□□ 0.39
HOXD3-202ENST00000410016 OPLAHO14841 1288 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms