RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 ERVFRD-1P60508 538 aa6.92□□□□□ -1.3
LSM5-206ENST00000409987 TUSC3Q13454 348 aa6.92□□□□□ -1.3
LSM5-206ENST00000409987 ZMYM1Q5SVZ6 1142 aa6.92□□□□□ -1.3
LSM5-206ENST00000409987 IQSEC1Q6DN90 963 aa6.92□□□□□ -1.3
LSM5-206ENST00000409987 KCTD1Q719H9 257 aa6.92□□□□□ -1.3
LSM5-206ENST00000409987 HDGFL2Q7Z4V5 671 aaPredicted RBP6.92□□□□□ -1.3
LSM5-206ENST00000409987 RAVER1Q8IY67 606 aaKnown RBP6.92□□□□□ -1.3
LSM5-206ENST00000409987 ABI1Q8IZP0 508 aa6.92□□□□□ -1.3
LSM5-206ENST00000409987 NLGN4XQ8N0W4 816 aa6.92□□□□□ -1.3
LSM5-206ENST00000409987 CLRN3Q8NCR9 226 aa6.92□□□□□ -1.3
LSM5-206ENST00000409987 FLAD1Q8NFF5 587 aa6.92□□□□□ -1.3
LSM5-206ENST00000409987 ABHD4Q8TB40 342 aa6.92□□□□□ -1.3
LSM5-206ENST00000409987 ELF4Q99607 663 aaPredicted RBP6.92□□□□□ -1.3
LSM5-206ENST00000409987 ASH2LQ9UBL3 628 aa6.92□□□□□ -1.3
LSM5-206ENST00000409987 TRHDEQ9UKU6 1024 aa6.92□□□□□ -1.3
LSM5-206ENST00000409987 PALD1Q9ULE6 856 aa6.92□□□□□ -1.3
LSM5-206ENST00000409987 ZNF652Q9Y2D9 606 aa6.92□□□□□ -1.3
LSM5-206ENST00000409987 PCDHB4Q9Y5E5 795 aa6.92□□□□□ -1.3
LSM5-206ENST00000409987 ZC3H12DA2A288 527 aaKnown RBP6.91□□□□□ -1.3
LSM5-206ENST00000409987 FAM90A27PA6NNH2 459 aa6.91□□□□□ -1.3
LSM5-206ENST00000409987 MAFKO60675 156 aa6.91□□□□□ -1.3
LSM5-206ENST00000409987 ULK1O75385 1050 aa6.91□□□□□ -1.3
LSM5-206ENST00000409987 ALDH1L1O75891 902 aa6.91□□□□□ -1.3
LSM5-206ENST00000409987 SDHBP21912 280 aa6.91□□□□□ -1.3
LSM5-206ENST00000409987 FYB2Q5VWT5 728 aa6.91□□□□□ -1.3
LSM5-206ENST00000409987 PAQR3Q6TCH7 311 aa6.91□□□□□ -1.3
LSM5-206ENST00000409987 EP400NLQ6ZTU2 488 aa6.91□□□□□ -1.3
LSM5-206ENST00000409987 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.91□□□□□ -1.3
LSM5-206ENST00000409987 PHOSPHO1Q8TCT1 267 aa6.91□□□□□ -1.3
LSM5-206ENST00000409987 CLEC4DQ8WXI8 215 aa6.91□□□□□ -1.3
LSM5-206ENST00000409987 SLC5A5Q92911 643 aa6.91□□□□□ -1.3
LSM5-206ENST00000409987 SMAD5Q99717 465 aaKnown RBP6.91□□□□□ -1.3
LSM5-206ENST00000409987 AP5M1Q9H0R1 490 aa6.91□□□□□ -1.3
LSM5-206ENST00000409987 YBX2Q9Y2T7 364 aaKnown RBP6.91□□□□□ -1.3
LSM5-206ENST00000409987 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.9□□□□□ -1.3
LSM5-206ENST00000409987 TCRBV5S2A0A599 114 aa6.9□□□□□ -1.3
LSM5-206ENST00000409987 GABRDO14764 452 aa6.9□□□□□ -1.3
LSM5-206ENST00000409987 HIP1RO75146 1068 aa6.9□□□□□ -1.3
LSM5-206ENST00000409987 AFMP43652 599 aa6.9□□□□□ -1.3
LSM5-206ENST00000409987 KIF11P52732 1056 aa6.9□□□□□ -1.3
LSM5-206ENST00000409987 SMAD3P84022 425 aaKnown RBP6.9□□□□□ -1.3
LSM5-206ENST00000409987 TTF1Q15361 905 aaPredicted RBP6.9□□□□□ -1.3
LSM5-206ENST00000409987 TERF2Q15554 542 aa6.9□□□□□ -1.3
LSM5-206ENST00000409987 ZNF174Q15697 407 aa6.9□□□□□ -1.3
LSM5-206ENST00000409987 SMAD2Q15796 467 aaKnown RBP6.9□□□□□ -1.3
LSM5-206ENST00000409987 DDB1Q16531 1140 aa6.9□□□□□ -1.3
LSM5-206ENST00000409987 CCDC181Q5TID7 509 aa6.9□□□□□ -1.3
LSM5-206ENST00000409987 BROXQ5VW32 411 aa6.9□□□□□ -1.3
LSM5-206ENST00000409987 PEX11GQ96HA9 241 aa6.9□□□□□ -1.3
LSM5-206ENST00000409987 TOMM22Q9NS69 142 aa6.9□□□□□ -1.3
LSM5-206ENST00000409987 NUB1Q9Y5A7 615 aa6.9□□□□□ -1.3
LSM5-206ENST00000409987 F8W031 263 aaPredicted RBP6.89□□□□□ -1.31
LSM5-206ENST00000409987 K7ESF4 209 aa6.89□□□□□ -1.31
LSM5-206ENST00000409987 BUB1BO60566 1050 aaPredicted RBP6.89□□□□□ -1.31
LSM5-206ENST00000409987 PTPN1P18031 435 aaKnown RBP6.89□□□□□ -1.31
LSM5-206ENST00000409987 PTX3P26022 381 aaPredicted RBP6.89□□□□□ -1.31
LSM5-206ENST00000409987 SESN3P58005 492 aa6.89□□□□□ -1.31
LSM5-206ENST00000409987 ERVK-21P61565 698 aa6.89□□□□□ -1.31
LSM5-206ENST00000409987 SYDE2Q5VT97 1194 aa6.89□□□□□ -1.31
LSM5-206ENST00000409987 BTBD8Q5XKL5 378 aa6.89□□□□□ -1.31
LSM5-206ENST00000409987 ESRP1Q6NXG1 681 aaKnown RBP6.89□□□□□ -1.31
LSM5-206ENST00000409987 MILR1Q7Z6M3 343 aa6.89□□□□□ -1.31
LSM5-206ENST00000409987 PASD1Q8IV76 773 aa6.89□□□□□ -1.31
LSM5-206ENST00000409987 ARRDC4Q8NCT1 418 aa6.89□□□□□ -1.31
LSM5-206ENST00000409987 SCYL1Q96KG9 808 aa6.89□□□□□ -1.31
LSM5-206ENST00000409987 PDGFDQ9GZP0 370 aaPredicted RBP6.89□□□□□ -1.31
LSM5-206ENST00000409987 MS4A5Q9H3V2 200 aa6.89□□□□□ -1.31
LSM5-206ENST00000409987 PCIF1Q9H4Z3 704 aa6.89□□□□□ -1.31
LSM5-206ENST00000409987 ZMAT4Q9H898 229 aa6.89□□□□□ -1.31
LSM5-206ENST00000409987 KCNH7Q9NS40 1196 aa6.89□□□□□ -1.31
LSM5-206ENST00000409987 NUDT5Q9UKK9 219 aa6.89□□□□□ -1.31
LSM5-206ENST00000409987 HCFC2Q9Y5Z7 792 aa6.89□□□□□ -1.31
LSM5-206ENST00000409987 NUDT19A8MXV4 375 aa6.88□□□□□ -1.31
LSM5-206ENST00000409987 C4BPAP04003 597 aaKnown RBP6.88□□□□□ -1.31
LSM5-206ENST00000409987 GJA4P35212 333 aa6.88□□□□□ -1.31
LSM5-206ENST00000409987 NEK2P51955 445 aa6.88□□□□□ -1.31
LSM5-206ENST00000409987 GP2P55259 537 aaKnown RBP6.88□□□□□ -1.31
LSM5-206ENST00000409987 PHC1P78364 1004 aa6.88□□□□□ -1.31
LSM5-206ENST00000409987 GRIN1Q05586 938 aa6.88□□□□□ -1.31
LSM5-206ENST00000409987 MCL1Q07820 350 aa6.88□□□□□ -1.31
LSM5-206ENST00000409987 TMEM132BQ14DG7 1078 aa6.88□□□□□ -1.31
LSM5-206ENST00000409987 ADGRF1Q5T601 910 aa6.88□□□□□ -1.31
LSM5-206ENST00000409987 CC2D1AQ6P1N0 951 aaPredicted RBP6.88□□□□□ -1.31
LSM5-206ENST00000409987 RPTNQ6XPR3 784 aa6.88□□□□□ -1.31
LSM5-206ENST00000409987 TRIM48Q8IWZ4 208 aa6.88□□□□□ -1.31
LSM5-206ENST00000409987 CBARPQ8N350 705 aaPredicted RBP6.88□□□□□ -1.31
LSM5-206ENST00000409987 INTS4Q96HW7 963 aaKnown RBP6.88□□□□□ -1.31
LSM5-206ENST00000409987 KIRREL1Q96J84 757 aa6.88□□□□□ -1.31
LSM5-206ENST00000409987 YIPF4Q9BSR8 244 aa6.88□□□□□ -1.31
LSM5-206ENST00000409987 MENTQ9BUN1 341 aa6.88□□□□□ -1.31
LSM5-206ENST00000409987 ACSS2Q9NR19 701 aa6.88□□□□□ -1.31
LSM5-206ENST00000409987 RIC8BQ9NVN3 520 aa6.88□□□□□ -1.31
LSM5-206ENST00000409987 EID1Q9Y6B2 187 aa6.88□□□□□ -1.31
LSM5-206ENST00000409987 TNKSO95271 1327 aa6.87□□□□□ -1.31
LSM5-206ENST00000409987 LCHNA4D1U4 455 aa6.87□□□□□ -1.31
LSM5-206ENST00000409987 RASSF10A6NK89 507 aa6.87□□□□□ -1.31
LSM5-206ENST00000409987 ACOT7O00154 380 aa6.87□□□□□ -1.31
LSM5-206ENST00000409987 LSP1P33241 339 aa6.87□□□□□ -1.31
LSM5-206ENST00000409987 PRR5P85299 388 aa6.87□□□□□ -1.31
LSM5-206ENST00000409987 NR1I3Q14994 352 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms