RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 PHOSPHO2Q8TCD6 241 aa22.4■■□□□ 1.18
TSPAN4-209ENST00000409543 PKD2L1Q9P0L9 805 aa22.4■■□□□ 1.18
TSPAN4-209ENST00000409543 YBX2Q9Y2T7 364 aaKnown RBP22.4■■□□□ 1.18
TSPAN4-209ENST00000409543 MEIS1O00470 390 aa22.39■■□□□ 1.17
TSPAN4-209ENST00000409543 TREHO43280 583 aa22.39■■□□□ 1.17
TSPAN4-209ENST00000409543 NBNO60934 754 aa22.39■■□□□ 1.17
TSPAN4-209ENST00000409543 CCT2P78371 535 aaKnown RBP22.39■■□□□ 1.17
TSPAN4-209ENST00000409543 SLC9A7Q96T83 725 aa22.39■■□□□ 1.17
TSPAN4-209ENST00000409543 NKX2-4Q9H2Z4 354 aa22.39■■□□□ 1.17
TSPAN4-209ENST00000409543 C6orf50Q9HD87 102 aa22.39■■□□□ 1.17
TSPAN4-209ENST00000409543 SETD4Q9NVD3 440 aa22.39■■□□□ 1.17
TSPAN4-209ENST00000409543 GBF1Q92538 1859 aa22.39■■□□□ 1.17
TSPAN4-209ENST00000409543 NFASCO94856 1347 aa22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 ARP10275 920 aa22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 FOSL2P15408 326 aa22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 GNA11P29992 359 aa22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 THPOP40225 353 aa22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 RABGGTBP53611 331 aa22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 ADAM17P78536 824 aa22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 ARHGAP4P98171 946 aa22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 JAKMIP3Q5VZ66 844 aa22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 CNKSR3Q6P9H4 555 aa22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 NIPA1Q7RTP0 329 aa22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 ZNF274Q96GC6 653 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 SLC26A6Q9BXS9 759 aa22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 UPF3BQ9BZI7 483 aaKnown RBP22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 SLC28A3Q9HAS3 691 aa22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 NCOA5Q9HCD5 579 aaKnown RBP22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 JPH1Q9HDC5 661 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 CHD9Q3L8U1 2897 aa22.38■■□□□ 1.17
TSPAN4-209ENST00000409543 NRCAMQ92823 1304 aa22.37■■□□□ 1.17
TSPAN4-209ENST00000409543 RSPH10B2B2RC85 870 aa22.37■■□□□ 1.17
TSPAN4-209ENST00000409543 RSPH10BP0C881 870 aa22.37■■□□□ 1.17
TSPAN4-209ENST00000409543 ZNF76P36508 570 aa22.37■■□□□ 1.17
TSPAN4-209ENST00000409543 MBTPS1Q14703 1052 aa22.37■■□□□ 1.17
TSPAN4-209ENST00000409543 REXO1Q8N1G1 1221 aaKnown RBP22.37■■□□□ 1.17
TSPAN4-209ENST00000409543 CRYGNQ8WXF5 182 aa22.37■■□□□ 1.17
TSPAN4-209ENST00000409543 SDF4Q9BRK5 362 aa22.37■■□□□ 1.17
TSPAN4-209ENST00000409543 SMARCAD1Q9H4L7 1026 aa22.37■■□□□ 1.17
TSPAN4-209ENST00000409543 AGO4Q9HCK5 861 aaKnown RBP22.37■■□□□ 1.17
TSPAN4-209ENST00000409543 ERAP1Q9NZ08 941 aa22.37■■□□□ 1.17
TSPAN4-209ENST00000409543 SLC9A2Q9UBY0 812 aa22.37■■□□□ 1.17
TSPAN4-209ENST00000409543 EMSYQ7Z589 1322 aa22.36■■□□□ 1.17
TSPAN4-209ENST00000409543 CAND2O75155 1236 aa22.36■■□□□ 1.17
TSPAN4-209ENST00000409543 CYP3A4P08684 503 aa22.36■■□□□ 1.17
TSPAN4-209ENST00000409543 MAFAQ8NHW3 353 aaPredicted RBP22.36■■□□□ 1.17
TSPAN4-209ENST00000409543 GLG1Q92896 1179 aa22.36■■□□□ 1.17
TSPAN4-209ENST00000409543 PDRG1Q9NUG6 133 aa22.36■■□□□ 1.17
TSPAN4-209ENST00000409543 ABHD14A-ACY1A0A1B0GW23 586 aa22.35■■□□□ 1.17
TSPAN4-209ENST00000409543 ADAMTS3O15072 1205 aa22.35■■□□□ 1.17
TSPAN4-209ENST00000409543 PPFIA3O75145 1194 aa22.35■■□□□ 1.17
TSPAN4-209ENST00000409543 LGR5O75473 907 aa22.35■■□□□ 1.17
TSPAN4-209ENST00000409543 MYOGP15173 224 aa22.35■■□□□ 1.17
TSPAN4-209ENST00000409543 KCNJ6P48051 423 aa22.35■■□□□ 1.17
TSPAN4-209ENST00000409543 HERC6Q8IVU3 1022 aa22.35■■□□□ 1.17
TSPAN4-209ENST00000409543 CCDC148Q8NFR7 591 aa22.35■■□□□ 1.17
TSPAN4-209ENST00000409543 BICD2Q8TD16 824 aa22.35■■□□□ 1.17
TSPAN4-209ENST00000409543 LMBR1Q8WVP7 490 aa22.35■■□□□ 1.17
TSPAN4-209ENST00000409543 SH3GLB2Q9NR46 395 aa22.35■■□□□ 1.17
TSPAN4-209ENST00000409543 CDH23Q9H251 3354 aa22.35■■□□□ 1.17
TSPAN4-209ENST00000409543 FAM86B1E9PN63 330 aa22.34■■□□□ 1.17
TSPAN4-209ENST00000409543 EFCAB14O75071 495 aa22.34■■□□□ 1.17
TSPAN4-209ENST00000409543 FAM86B2P0C5J1 330 aa22.34■■□□□ 1.17
TSPAN4-209ENST00000409543 ACTR2P61160 394 aa22.34■■□□□ 1.17
TSPAN4-209ENST00000409543 WDR5P61964 334 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-209ENST00000409543 ITGB3BPQ13352 177 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-209ENST00000409543 TRIM22Q8IYM9 498 aa22.34■■□□□ 1.17
TSPAN4-209ENST00000409543 PCYT2Q99447 389 aa22.34■■□□□ 1.17
TSPAN4-209ENST00000409543 PRDM12Q9H4Q4 367 aa22.34■■□□□ 1.17
TSPAN4-209ENST00000409543 KAT6AQ92794 2004 aa22.34■■□□□ 1.17
TSPAN4-209ENST00000409543 IGLV3-22A0A075B6J6 115 aa22.33■■□□□ 1.17
TSPAN4-209ENST00000409543 CPLX1O14810 134 aa22.33■■□□□ 1.17
TSPAN4-209ENST00000409543 MARK3P27448 753 aa22.33■■□□□ 1.17
TSPAN4-209ENST00000409543 ANAPC15P60006 121 aa22.33■■□□□ 1.17
TSPAN4-209ENST00000409543 SSRP1Q08945 709 aaKnown RBP22.33■■□□□ 1.17
TSPAN4-209ENST00000409543 PPFIA1Q13136 1202 aa22.33■■□□□ 1.17
TSPAN4-209ENST00000409543 IKBKEQ14164 716 aa22.33■■□□□ 1.17
TSPAN4-209ENST00000409543 TCTN1Q2MV58 587 aa22.33■■□□□ 1.17
TSPAN4-209ENST00000409543 PPP2R2DQ66LE6 453 aa22.33■■□□□ 1.17
TSPAN4-209ENST00000409543 PLA2G4DQ86XP0 818 aa22.33■■□□□ 1.17
TSPAN4-209ENST00000409543 GAS2L1Q99501 681 aaPredicted RBP22.33■■□□□ 1.17
TSPAN4-209ENST00000409543 LARP6Q9BRS8 491 aaKnown RBP22.33■■□□□ 1.17
TSPAN4-209ENST00000409543 AZI2Q9H6S1 392 aa22.33■■□□□ 1.17
TSPAN4-209ENST00000409543 VPS54Q9P1Q0 977 aa22.33■■□□□ 1.17
TSPAN4-209ENST00000409543 KIF28PB7ZC32 967 aa22.32■■□□□ 1.16
TSPAN4-209ENST00000409543 ATG7O95352 703 aa22.32■■□□□ 1.16
TSPAN4-209ENST00000409543 CPLX2Q6PUV4 134 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-209ENST00000409543 PLPPR4Q7Z2D5 763 aa22.32■■□□□ 1.16
TSPAN4-209ENST00000409543 RPAINQ86UA6 219 aa22.32■■□□□ 1.16
TSPAN4-209ENST00000409543 MYO9BQ13459 2157 aa22.31■■□□□ 1.16
TSPAN4-209ENST00000409543 CA3P07451 260 aa22.31■■□□□ 1.16
TSPAN4-209ENST00000409543 GRIK4Q16099 956 aa22.31■■□□□ 1.16
TSPAN4-209ENST00000409543 PLEKHG4Q58EX7 1191 aa22.31■■□□□ 1.16
TSPAN4-209ENST00000409543 FAM26DQ5JW98 314 aa22.31■■□□□ 1.16
TSPAN4-209ENST00000409543 TAF2Q6P1X5 1199 aa22.31■■□□□ 1.16
TSPAN4-209ENST00000409543 DBF4BQ8NFT6 615 aa22.31■■□□□ 1.16
TSPAN4-209ENST00000409543 TNPO1Q92973 898 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-209ENST00000409543 MBLAC1A4D2B0 266 aaPredicted RBP22.3■■□□□ 1.16
TSPAN4-209ENST00000409543 RRN3P2A6NIE6 340 aa22.3■■□□□ 1.16
TSPAN4-209ENST00000409543 IPO5O00410 1097 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 492.3 ms