RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 PDS5AQ29RF7 1337 aaKnown RBP18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 ARHGEF28Q8N1W1 1705 aaKnown RBP18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 EXOSC10Q01780 885 aaKnown RBP18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 ANKS4BQ8N8V4 417 aa18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 NCAPGQ9BPX3 1015 aa18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 DESI2Q9BSY9 194 aa18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 FTOQ9C0B1 505 aaKnown RBP eCLIP18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 NKIRAS1Q9NYS0 192 aa18.3■□□□□ 0.52
PCDHA13-202ENST00000409494 EIF3CLB5ME19 914 aaKnown RBP18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 AKR1B1P15121 316 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 XRRA1Q6P2D8 792 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 EIF3CQ99613 913 aaKnown RBP18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 SAR1BQ9Y6B6 198 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 ZNF609O15014 1411 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 RASSF4Q9H2L5 321 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 HOXA13P31271 388 aaPredicted RBP18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 DDIT3P35638 169 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 LONRF3Q496Y0 759 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 CCDC25Q86WR0 208 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 TTC39CQ8N584 583 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 BBOF1Q8ND07 529 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 TEX13BQ9BXU2 312 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 RAVER2Q9HCJ3 691 aaKnown RBP18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 ASIC3Q9UHC3 531 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 USTQ9Y2C2 406 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 SLC44A5Q8NCS7 719 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 NLRP7Q8WX94 980 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 PAGE5Q96GU1 130 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 MAN1B1Q9UKM7 699 aa18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 EPN1Q9Y6I3 576 aaPredicted RBP18.29■□□□□ 0.52
PCDHA13-202ENST00000409494 KYAT1Q16773 422 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 INTS8Q75QN2 995 aaKnown RBP18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 ADGRF4Q8IZF3 695 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 ANAPC4Q9UJX5 808 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 MAN1A1P33908 653 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 PHKA2P46019 1235 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 ZNF543Q08ER8 600 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 CCDC63Q8NA47 563 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 PGBD1Q96JS3 809 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 PPP1R13BQ96KQ4 1090 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 TOPORSQ9NS56 1045 aaPredicted RBP18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 TBX3O15119 743 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 ATP2C2O75185 946 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 SLC25A27O95847 323 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 CDC42EP5Q6NZY7 148 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 SAMD3Q8N6K7 520 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 BHMT2Q9H2M3 363 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 SNX25Q9H3E2 840 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 LCMT1Q9UIC8 334 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 PLSCR1O15162 318 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 QARSP47897 775 aaKnown RBP18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 MXI1P50539 228 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 LMNB2Q03252 620 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 PDIA5Q14554 519 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 CEP63Q96MT8 703 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 MMP19Q99542 508 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 KIF20BQ96Q89 1820 aa18.28■□□□□ 0.52
PCDHA13-202ENST00000409494 DPEP1P16444 411 aa18.27■□□□□ 0.52
PCDHA13-202ENST00000409494 KMT5BQ4FZB7 885 aa18.27■□□□□ 0.52
PCDHA13-202ENST00000409494 TRIM50Q86XT4 487 aa18.27■□□□□ 0.52
PCDHA13-202ENST00000409494 CCDC105Q8IYK2 499 aa18.27■□□□□ 0.52
PCDHA13-202ENST00000409494 ZNF280CQ8ND82 737 aa18.27■□□□□ 0.52
PCDHA13-202ENST00000409494 CALR3Q96L12 384 aaKnown RBP18.27■□□□□ 0.52
PCDHA13-202ENST00000409494 MROH1Q8NDA8 1641 aa18.27■□□□□ 0.52
PCDHA13-202ENST00000409494 BCL9O00512 1426 aa18.27■□□□□ 0.52
PCDHA13-202ENST00000409494 CTNND1O60716 968 aaKnown RBP18.27■□□□□ 0.52
PCDHA13-202ENST00000409494 SNAPC2Q13487 334 aa18.27■□□□□ 0.52
PCDHA13-202ENST00000409494 RPF1Q9H9Y2 349 aaKnown RBP18.27■□□□□ 0.52
PCDHA13-202ENST00000409494 PSMC5P62195 406 aa18.27■□□□□ 0.52
PCDHA13-202ENST00000409494 MRPL47Q9HD33 250 aaKnown RBP18.27■□□□□ 0.52
PCDHA13-202ENST00000409494 CCDC170Q8IYT3 715 aa18.27■□□□□ 0.51
PCDHA13-202ENST00000409494 OTUD5Q96G74 571 aa18.27■□□□□ 0.51
PCDHA13-202ENST00000409494 VCPKMTQ9H867 229 aa18.27■□□□□ 0.51
PCDHA13-202ENST00000409494 EPHA7Q15375 998 aa18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 TTC31Q49AM3 519 aaPredicted RBP18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 ARMCX2Q7L311 632 aa18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 DAAM2Q86T65 1068 aa18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 CCDC89Q8N998 374 aa18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 ZNF526Q8TF50 670 aaPredicted RBP18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 PPM1EQ8WY54 764 aa18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 KIAA0391O15091 583 aaKnown RBP18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 MAFGO15525 162 aa18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 SRGAP1Q7Z6B7 1085 aa18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 LDHDQ86WU2 507 aa18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 ZBED6P86452 979 aa18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 KRT81Q14533 505 aa18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 MAPK6Q16659 721 aa18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 CCDC121Q6ZUS5 278 aa18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 PSPC1Q8WXF1 523 aaKnown RBP18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 PPP2R3BQ9Y5P8 575 aa18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 MYO1FO00160 1098 aa18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 PARK7Q99497 189 aaKnown RBP18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 RPAP3Q9H6T3 665 aaPredicted RBP18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 PCDHB4Q9Y5E5 795 aa18.26■□□□□ 0.51
PCDHA13-202ENST00000409494 A0A087WWV3 80 aa18.25■□□□□ 0.51
PCDHA13-202ENST00000409494 P3H4Q92791 437 aa18.25■□□□□ 0.51
PCDHA13-202ENST00000409494 EZH2Q15910 746 aaKnown RBP18.25■□□□□ 0.51
PCDHA13-202ENST00000409494 AIFM3Q96NN9 605 aa18.25■□□□□ 0.51
PCDHA13-202ENST00000409494 TLDC2A0PJX2 215 aa18.24■□□□□ 0.51
PCDHA13-202ENST00000409494 SCP2P22307 547 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms