RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 CACNB3P54284 484 aa18.49■□□□□ 0.55
SYNC-202ENST00000409190 IKQ13123 557 aaPredicted RBP18.49■□□□□ 0.55
SYNC-202ENST00000409190 C16orf86Q6ZW13 317 aa18.49■□□□□ 0.55
SYNC-202ENST00000409190 GPATCH11Q8N954 259 aa18.49■□□□□ 0.55
SYNC-202ENST00000409190 DNAJC19Q96DA6 116 aa18.49■□□□□ 0.55
SYNC-202ENST00000409190 EMILIN3Q9NT22 766 aa18.49■□□□□ 0.55
SYNC-202ENST00000409190 NARFQ9UHQ1 456 aa18.49■□□□□ 0.55
SYNC-202ENST00000409190 RPS6KA1Q15418 735 aa18.49■□□□□ 0.55
SYNC-202ENST00000409190 ASTE1Q2TB18 679 aaPredicted RBP18.49■□□□□ 0.55
SYNC-202ENST00000409190 OTUD6BQ8N6M0 293 aa18.49■□□□□ 0.55
SYNC-202ENST00000409190 RPGRQ92834 1020 aaKnown RBP18.49■□□□□ 0.55
SYNC-202ENST00000409190 CEP72Q9P209 647 aa18.49■□□□□ 0.55
SYNC-202ENST00000409190 PCDHB13Q9Y5F0 798 aa18.49■□□□□ 0.55
SYNC-202ENST00000409190 DOT1LQ8TEK3 1739 aa18.49■□□□□ 0.55
SYNC-202ENST00000409190 GRID2IPA4D2P6 1211 aa18.48■□□□□ 0.55
SYNC-202ENST00000409190 SMIM23A6NLE4 172 aa18.48■□□□□ 0.55
SYNC-202ENST00000409190 NR1D1P20393 614 aa18.48■□□□□ 0.55
SYNC-202ENST00000409190 PPP1R2P41236 205 aa18.48■□□□□ 0.55
SYNC-202ENST00000409190 PSMC6P62333 389 aa18.48■□□□□ 0.55
SYNC-202ENST00000409190 CCNL1Q9UK58 526 aaPredicted RBP18.48■□□□□ 0.55
SYNC-202ENST00000409190 SHOX2O60902 331 aaPredicted RBP18.48■□□□□ 0.55
SYNC-202ENST00000409190 ABCB4P21439 1286 aa18.48■□□□□ 0.55
SYNC-202ENST00000409190 TMOD1P28289 359 aa18.48■□□□□ 0.55
SYNC-202ENST00000409190 LLGL1Q15334 1064 aa18.48■□□□□ 0.55
SYNC-202ENST00000409190 USH1GQ495M9 461 aa18.48■□□□□ 0.55
SYNC-202ENST00000409190 SLC10A5Q5PT55 438 aa18.48■□□□□ 0.55
SYNC-202ENST00000409190 PSTPIP2Q9H939 334 aa18.48■□□□□ 0.55
SYNC-202ENST00000409190 JMJD4Q9H9V9 463 aa18.48■□□□□ 0.55
SYNC-202ENST00000409190 CASZ1Q86V15 1759 aa18.48■□□□□ 0.55
SYNC-202ENST00000409190 ITGA4P13612 1032 aa18.48■□□□□ 0.55
SYNC-202ENST00000409190 IFT88Q13099 833 aa18.48■□□□□ 0.55
SYNC-202ENST00000409190 CELF4Q9BZC1 486 aaKnown RBP18.48■□□□□ 0.55
SYNC-202ENST00000409190 TCP10Q12799 353 aa18.47■□□□□ 0.55
SYNC-202ENST00000409190 SLC18A3Q16572 532 aa18.47■□□□□ 0.55
SYNC-202ENST00000409190 PRR16Q569H4 304 aa18.47■□□□□ 0.55
SYNC-202ENST00000409190 CNBD1Q8NA66 436 aa18.47■□□□□ 0.55
SYNC-202ENST00000409190 SCFD1Q8WVM8 642 aa18.47■□□□□ 0.55
SYNC-202ENST00000409190 LUC7LQ9NQ29 371 aaKnown RBP18.47■□□□□ 0.55
SYNC-202ENST00000409190 AMACRQ9UHK6 382 aa18.47■□□□□ 0.55
SYNC-202ENST00000409190 NHSL1Q5SYE7 1610 aa18.47■□□□□ 0.55
SYNC-202ENST00000409190 LSP1P33241 339 aa18.47■□□□□ 0.55
SYNC-202ENST00000409190 FXR2P51116 673 aaKnown RBP eCLIP18.47■□□□□ 0.55
SYNC-202ENST00000409190 HDLBPQ00341 1268 aaKnown RBP18.47■□□□□ 0.55
SYNC-202ENST00000409190 CCDC65Q8IXS2 484 aa18.47■□□□□ 0.55
SYNC-202ENST00000409190 MTMR4Q9NYA4 1195 aa18.47■□□□□ 0.55
SYNC-202ENST00000409190 GOLGA6L10A6NI86 522 aa18.47■□□□□ 0.55
SYNC-202ENST00000409190 KCNA1Q09470 495 aa18.47■□□□□ 0.55
SYNC-202ENST00000409190 NAB2Q15742 525 aa18.47■□□□□ 0.55
SYNC-202ENST00000409190 ALS2CLQ60I27 953 aa18.47■□□□□ 0.55
SYNC-202ENST00000409190 UHMK1Q8TAS1 419 aaKnown RBP18.47■□□□□ 0.55
SYNC-202ENST00000409190 RSPH10B2B2RC85 870 aa18.46■□□□□ 0.55
SYNC-202ENST00000409190 RSPH10BP0C881 870 aa18.46■□□□□ 0.55
SYNC-202ENST00000409190 FLT3P36888 993 aa18.46■□□□□ 0.55
SYNC-202ENST00000409190 ERVK-9P63128 1117 aa18.46■□□□□ 0.55
SYNC-202ENST00000409190 MKRN4PQ13434 485 aaPredicted RBP18.46■□□□□ 0.55
SYNC-202ENST00000409190 ZNF571Q7Z3V5 609 aaPredicted RBP18.46■□□□□ 0.55
SYNC-202ENST00000409190 KSR1Q8IVT5 923 aa18.46■□□□□ 0.55
SYNC-202ENST00000409190 SH3GL2Q99962 352 aa18.46■□□□□ 0.55
SYNC-202ENST00000409190 RIC8AQ9NPQ8 531 aa18.46■□□□□ 0.55
SYNC-202ENST00000409190 HDAC9Q9UKV0 1011 aa18.46■□□□□ 0.55
SYNC-202ENST00000409190 SNED1Q8TER0 1413 aa18.46■□□□□ 0.55
SYNC-202ENST00000409190 PRLRP16471 622 aa18.46■□□□□ 0.55
SYNC-202ENST00000409190 EFCC1Q9HA90 598 aa18.46■□□□□ 0.55
SYNC-202ENST00000409190 SSU72P8A0A1W2PR75 194 aa18.45■□□□□ 0.54
SYNC-202ENST00000409190 CETN3O15182 167 aa18.45■□□□□ 0.54
SYNC-202ENST00000409190 CTNNA1P35221 906 aaKnown RBP18.45■□□□□ 0.54
SYNC-202ENST00000409190 CASP4P49662 377 aa18.45■□□□□ 0.54
SYNC-202ENST00000409190 U2AF1L4Q8WU68 220 aaKnown RBP18.45■□□□□ 0.54
SYNC-202ENST00000409190 MED24O75448 989 aa18.45■□□□□ 0.54
SYNC-202ENST00000409190 GRAPQ13588 217 aa18.45■□□□□ 0.54
SYNC-202ENST00000409190 PLS1Q14651 629 aa18.45■□□□□ 0.54
SYNC-202ENST00000409190 GRAPLQ8TC17 118 aaPredicted RBP18.45■□□□□ 0.54
SYNC-202ENST00000409190 CUL5Q93034 780 aa18.45■□□□□ 0.54
SYNC-202ENST00000409190 GOPCQ9HD26 462 aa18.45■□□□□ 0.54
SYNC-202ENST00000409190 CHORDC1Q9UHD1 332 aaPredicted RBP18.45■□□□□ 0.54
SYNC-202ENST00000409190 PJA2O43164 708 aa18.45■□□□□ 0.54
SYNC-202ENST00000409190 LCA5LO95447 670 aa18.45■□□□□ 0.54
SYNC-202ENST00000409190 RHBDL3P58872 404 aa18.45■□□□□ 0.54
SYNC-202ENST00000409190 SFR1Q86XK3 245 aa18.45■□□□□ 0.54
SYNC-202ENST00000409190 NEUROG2Q9H2A3 272 aa18.45■□□□□ 0.54
SYNC-202ENST00000409190 RIOX1Q9H6W3 641 aa18.45■□□□□ 0.54
SYNC-202ENST00000409190 DDX4Q9NQI0 724 aaKnown RBP18.45■□□□□ 0.54
SYNC-202ENST00000409190 KRIT1O00522 736 aa18.44■□□□□ 0.54
SYNC-202ENST00000409190 DAPK3O43293 454 aa18.44■□□□□ 0.54
SYNC-202ENST00000409190 MYBP10242 640 aa18.44■□□□□ 0.54
SYNC-202ENST00000409190 PPP4CP60510 307 aa18.44■□□□□ 0.54
SYNC-202ENST00000409190 TNNC1P63316 161 aa18.44■□□□□ 0.54
SYNC-202ENST00000409190 ALKBH5Q6P6C2 394 aaKnown RBP18.44■□□□□ 0.54
SYNC-202ENST00000409190 IQCKQ8N0W5 287 aa18.44■□□□□ 0.54
SYNC-202ENST00000409190 PIK3R5Q8WYR1 880 aa18.44■□□□□ 0.54
SYNC-202ENST00000409190 CHMP2AO43633 222 aa18.44■□□□□ 0.54
SYNC-202ENST00000409190 GFPT2O94808 682 aa18.44■□□□□ 0.54
SYNC-202ENST00000409190 MEI1Q5TIA1 1274 aa18.44■□□□□ 0.54
SYNC-202ENST00000409190 GBP6Q6ZN66 633 aa18.44■□□□□ 0.54
SYNC-202ENST00000409190 DAAM2Q86T65 1068 aa18.44■□□□□ 0.54
SYNC-202ENST00000409190 RNF10Q8N5U6 811 aaKnown RBP18.44■□□□□ 0.54
SYNC-202ENST00000409190 USP38Q8NB14 1042 aa18.44■□□□□ 0.54
SYNC-202ENST00000409190 RDH13Q8NBN7 331 aa18.44■□□□□ 0.54
SYNC-202ENST00000409190 C8orf37Q96NL8 207 aa18.44■□□□□ 0.54
SYNC-202ENST00000409190 INPP4AQ96PE3 977 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms