RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 LRCH2Q5VUJ6 765 aa19.97■□□□□ 0.79
CTNS-203ENST00000399306 ANKRD33Q7Z3H0 272 aa19.97■□□□□ 0.79
CTNS-203ENST00000399306 KAT2BQ92831 832 aa19.97■□□□□ 0.79
CTNS-203ENST00000399306 FERMT2Q96AC1 680 aa19.97■□□□□ 0.79
CTNS-203ENST00000399306 ZSCAN16Q9H4T2 348 aaPredicted RBP19.97■□□□□ 0.79
CTNS-203ENST00000399306 ZNF215Q9UL58 517 aaPredicted RBP19.97■□□□□ 0.79
CTNS-203ENST00000399306 PDE4DIPQ5VU43 2346 aa19.97■□□□□ 0.79
CTNS-203ENST00000399306 DNAH12Q6ZR08 3092 aa19.96■□□□□ 0.79
CTNS-203ENST00000399306 ALPK3Q96L96 1907 aa19.96■□□□□ 0.79
CTNS-203ENST00000399306 WDR64B1ANS9 1081 aa19.96■□□□□ 0.79
CTNS-203ENST00000399306 LAD1O00515 517 aa19.96■□□□□ 0.79
CTNS-203ENST00000399306 JAK3P52333 1124 aa19.96■□□□□ 0.79
CTNS-203ENST00000399306 ABHD15Q6UXT9 468 aa19.96■□□□□ 0.79
CTNS-203ENST00000399306 PLPPR4Q7Z2D5 763 aa19.96■□□□□ 0.79
CTNS-203ENST00000399306 AFAP1L1Q8TED9 768 aa19.96■□□□□ 0.79
CTNS-203ENST00000399306 HAS1Q92839 578 aa19.96■□□□□ 0.79
CTNS-203ENST00000399306 TNPO1Q92973 898 aaKnown RBP19.96■□□□□ 0.79
CTNS-203ENST00000399306 MTMR9Q96QG7 549 aa19.96■□□□□ 0.79
CTNS-203ENST00000399306 SMARCAD1Q9H4L7 1026 aa19.96■□□□□ 0.79
CTNS-203ENST00000399306 PKD2L1Q9P0L9 805 aa19.96■□□□□ 0.79
CTNS-203ENST00000399306 MTMR6Q9Y217 621 aa19.96■□□□□ 0.79
CTNS-203ENST00000399306 MYH9P35579 1960 aaKnown RBP19.95■□□□□ 0.78
CTNS-203ENST00000399306 VPS37CA5D8V6 355 aaPredicted RBP19.95■□□□□ 0.78
CTNS-203ENST00000399306 H3BRB1 525 aa19.95■□□□□ 0.78
CTNS-203ENST00000399306 CCNE2O96020 404 aa19.95■□□□□ 0.78
CTNS-203ENST00000399306 PSEN2P49810 448 aa19.95■□□□□ 0.78
CTNS-203ENST00000399306 MLLT1Q03111 559 aaPredicted RBP19.95■□□□□ 0.78
CTNS-203ENST00000399306 PPP2R5CQ13362 524 aa19.95■□□□□ 0.78
CTNS-203ENST00000399306 CALCRLQ16602 461 aa19.95■□□□□ 0.78
CTNS-203ENST00000399306 LRRC26Q2I0M4 334 aa19.95■□□□□ 0.78
CTNS-203ENST00000399306 MIS18BP1Q6P0N0 1132 aa19.95■□□□□ 0.78
CTNS-203ENST00000399306 POTEDQ86YR6 584 aa19.95■□□□□ 0.78
CTNS-203ENST00000399306 VTI1AQ96AJ9 217 aa19.95■□□□□ 0.78
CTNS-203ENST00000399306 TUT1Q9H6E5 874 aaKnown RBP19.95■□□□□ 0.78
CTNS-203ENST00000399306 PCDHA10Q9Y5I2 948 aa19.95■□□□□ 0.78
CTNS-203ENST00000399306 WDR81Q562E7 1941 aa19.95■□□□□ 0.78
CTNS-203ENST00000399306 GRIN2DO15399 1336 aa19.95■□□□□ 0.78
CTNS-203ENST00000399306 SUPT20HL2P0C7V6 817 aa19.94■□□□□ 0.78
CTNS-203ENST00000399306 TOB1P50616 345 aaPredicted RBP19.94■□□□□ 0.78
CTNS-203ENST00000399306 FAM160B1Q5W0V3 765 aa19.94■□□□□ 0.78
CTNS-203ENST00000399306 AZI2Q9H6S1 392 aa19.94■□□□□ 0.78
CTNS-203ENST00000399306 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.94■□□□□ 0.78
CTNS-203ENST00000399306 FOXD4L1Q9NU39 408 aa19.94■□□□□ 0.78
CTNS-203ENST00000399306 ERAP1Q9NZ08 941 aa19.94■□□□□ 0.78
CTNS-203ENST00000399306 KAT6AQ92794 2004 aa19.93■□□□□ 0.78
CTNS-203ENST00000399306 MARCH6O60337 910 aa19.93■□□□□ 0.78
CTNS-203ENST00000399306 BMP15O95972 392 aa19.93■□□□□ 0.78
CTNS-203ENST00000399306 PSAPP07602 524 aa19.93■□□□□ 0.78
CTNS-203ENST00000399306 RTP1P59025 263 aa19.93■□□□□ 0.78
CTNS-203ENST00000399306 MFSD10Q14728 455 aa19.93■□□□□ 0.78
CTNS-203ENST00000399306 NBPF20Q3BBV1 942 aa19.93■□□□□ 0.78
CTNS-203ENST00000399306 DISC1Q9NRI5 854 aa19.93■□□□□ 0.78
CTNS-203ENST00000399306 VAV3Q9UKW4 847 aa19.93■□□□□ 0.78
CTNS-203ENST00000399306 DCDC2CA8MYV0 355 aa19.92■□□□□ 0.78
CTNS-203ENST00000399306 WNT7AO00755 349 aa19.92■□□□□ 0.78
CTNS-203ENST00000399306 TLR3O15455 904 aaKnown RBP19.92■□□□□ 0.78
CTNS-203ENST00000399306 SORBS3O60504 671 aa19.92■□□□□ 0.78
CTNS-203ENST00000399306 ZNF286BP0CG31 522 aa19.92■□□□□ 0.78
CTNS-203ENST00000399306 HOXC8P31273 242 aa19.92■□□□□ 0.78
CTNS-203ENST00000399306 MCM7P33993 719 aa19.92■□□□□ 0.78
CTNS-203ENST00000399306 PRPHP41219 470 aa19.92■□□□□ 0.78
CTNS-203ENST00000399306 STAT5BP51692 787 aa19.92■□□□□ 0.78
CTNS-203ENST00000399306 ATN1P54259 1190 aaPredicted RBP19.92■□□□□ 0.78
CTNS-203ENST00000399306 SP4Q02446 784 aa19.92■□□□□ 0.78
CTNS-203ENST00000399306 RESTQ13127 1097 aa19.92■□□□□ 0.78
CTNS-203ENST00000399306 KIAA0753Q2KHM9 967 aa19.92■□□□□ 0.78
CTNS-203ENST00000399306 PCYT2Q99447 389 aa19.92■□□□□ 0.78
CTNS-203ENST00000399306 UNC45AQ9H3U1 944 aa19.92■□□□□ 0.78
CTNS-203ENST00000399306 PCDHA12Q9UN75 941 aa19.92■□□□□ 0.78
CTNS-203ENST00000399306 MAFBQ9Y5Q3 323 aaPredicted RBP19.92■□□□□ 0.78
CTNS-203ENST00000399306 NR2E3Q9Y5X4 410 aa19.92■□□□□ 0.78
CTNS-203ENST00000399306 DDX39AO00148 427 aaKnown RBP19.91■□□□□ 0.78
CTNS-203ENST00000399306 EVI5O60447 810 aa19.91■□□□□ 0.78
CTNS-203ENST00000399306 CD4P01730 458 aa19.91■□□□□ 0.78
CTNS-203ENST00000399306 OR52Z1P0C646 297 aa19.91■□□□□ 0.78
CTNS-203ENST00000399306 PSMC6P62333 389 aa19.91■□□□□ 0.78
CTNS-203ENST00000399306 SPIRE1Q08AE8 756 aa19.91■□□□□ 0.78
CTNS-203ENST00000399306 ZNF174Q15697 407 aa19.91■□□□□ 0.78
CTNS-203ENST00000399306 TRIM60Q495X7 471 aa19.91■□□□□ 0.78
CTNS-203ENST00000399306 FAM126BQ8IXS8 530 aa19.91■□□□□ 0.78
CTNS-203ENST00000399306 C4orf32Q8N8J7 132 aa19.91■□□□□ 0.78
CTNS-203ENST00000399306 GLG1Q92896 1179 aa19.91■□□□□ 0.78
CTNS-203ENST00000399306 GTF2IRD1Q9UHL9 959 aa19.91■□□□□ 0.78
CTNS-203ENST00000399306 TELO2Q9Y4R8 837 aa19.91■□□□□ 0.78
CTNS-203ENST00000399306 MORC2Q9Y6X9 1032 aaPredicted RBP19.91■□□□□ 0.78
CTNS-203ENST00000399306 DKC1O60832 514 aaKnown RBP eCLIP19.9■□□□□ 0.784e-15■■■■■ 36.5
CTNS-203ENST00000399306 GNAT1P11488 350 aa19.9■□□□□ 0.78
CTNS-203ENST00000399306 ATP2B1P20020 1258 aa19.9■□□□□ 0.78
CTNS-203ENST00000399306 TLE2Q04725 743 aa19.9■□□□□ 0.78
CTNS-203ENST00000399306 EPHA7Q15375 998 aa19.9■□□□□ 0.78
CTNS-203ENST00000399306 UTP14CQ5TAP6 766 aaKnown RBP19.9■□□□□ 0.78
CTNS-203ENST00000399306 MIER3Q7Z3K6 550 aa19.9■□□□□ 0.78
CTNS-203ENST00000399306 C7orf31Q8N865 590 aa19.9■□□□□ 0.78
CTNS-203ENST00000399306 NEK9Q8TD19 979 aa19.9■□□□□ 0.78
CTNS-203ENST00000399306 DPF3Q92784 378 aa19.9■□□□□ 0.78
CTNS-203ENST00000399306 FAM167AQ96KS9 214 aa19.9■□□□□ 0.78
CTNS-203ENST00000399306 TMEM60Q9H2L4 133 aa19.9■□□□□ 0.78
CTNS-203ENST00000399306 TTC12Q9H892 705 aaPredicted RBP19.9■□□□□ 0.78
CTNS-203ENST00000399306 ZNF302Q9NR11 478 aa19.9■□□□□ 0.78
CTNS-203ENST00000399306 CEP131Q9UPN4 1083 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms