RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 UBA7P41226 1012 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 ATP2C1P98194 919 aaPredicted RBP10.05□□□□□ -0.8
BRCC3-206ENST00000399042 KRT76Q01546 638 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 DUSP28Q4G0W2 176 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 CELF3Q5SZQ8 465 aaKnown RBP10.05□□□□□ -0.8
BRCC3-206ENST00000399042 KRT79Q5XKE5 535 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 ARL6IP4Q66PJ3 421 aaKnown RBP10.05□□□□□ -0.8
BRCC3-206ENST00000399042 TAPT1Q6NXT6 567 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 MIS18BP1Q6P0N0 1132 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 CKAP2LQ8IYA6 745 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 LINC00301Q8NCQ3 95 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 ETNPPLQ8TBG4 499 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 LEO1Q8WVC0 666 aaPredicted RBP10.05□□□□□ -0.8
BRCC3-206ENST00000399042 SLC5A5Q92911 643 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 CCDC43Q96MW1 224 aaKnown RBP10.05□□□□□ -0.8
BRCC3-206ENST00000399042 MBOAT7Q96N66 472 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 SENP7Q9BQF6 1050 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 RNF208Q9H0X6 261 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 AZI2Q9H6S1 392 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 KCNMB3Q9NPA1 279 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 SCUBE2Q9NQ36 999 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 FAM13BQ9NYF5 915 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 RCOR1Q9UKL0 485 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.04□□□□□ -0.8
BRCC3-206ENST00000399042 WDR64B1ANS9 1081 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 MSCO60682 206 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 CUTAO60888 179 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 ATP9AO75110 1047 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 PPP6R2O75170 966 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 PRPF40AO75400 957 aaKnown RBP10.04□□□□□ -0.8
BRCC3-206ENST00000399042 PSAPP07602 524 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 C6orf222P0C671 652 aaPredicted RBP10.04□□□□□ -0.8
BRCC3-206ENST00000399042 CYBAP13498 195 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 CCND3P30281 292 aaPredicted RBP10.04□□□□□ -0.8
BRCC3-206ENST00000399042 LONP1P36776 959 aaKnown RBP10.04□□□□□ -0.8
BRCC3-206ENST00000399042 PRPHP41219 470 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 JAK3P52333 1124 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 SP2Q02086 613 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 ITGB3BPQ13352 177 aaPredicted RBP10.04□□□□□ -0.8
BRCC3-206ENST00000399042 GJC2Q5T442 439 aaPredicted RBP10.04□□□□□ -0.8
BRCC3-206ENST00000399042 UTP14CQ5TAP6 766 aaKnown RBP10.04□□□□□ -0.8
BRCC3-206ENST00000399042 FAM160B1Q5W0V3 765 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 METTL7BQ6UX53 244 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 TRMT1LQ7Z2T5 733 aaKnown RBP10.04□□□□□ -0.8
BRCC3-206ENST00000399042 TLK2Q86UE8 772 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 HAS1Q92839 578 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 GLG1Q92896 1179 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 COPS5Q92905 334 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 VTI1AQ96AJ9 217 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 LENG9Q96B70 501 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 CLIC6Q96NY7 704 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 MTMR9Q96QG7 549 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 XPNPEP3Q9NQH7 507 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 DISC1Q9NRI5 854 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 SRPRBQ9Y5M8 271 aaKnown RBP10.04□□□□□ -0.8
BRCC3-206ENST00000399042 PLXNB2O15031 1838 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 NFASCO94856 1347 aa10.04□□□□□ -0.8
BRCC3-206ENST00000399042 RBM47A0AV96 593 aaKnown RBP10.03□□□□□ -0.8
BRCC3-206ENST00000399042 EDIL3O43854 480 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 DUSP11O75319 330 aaKnown RBP10.03□□□□□ -0.8
BRCC3-206ENST00000399042 PSMD10O75832 226 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 ARIH2O95376 493 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 MYL3P08590 195 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 CCL5P13501 91 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 KCNA2P16389 499 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 SFNP31947 248 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 CCT6AP40227 531 aaKnown RBP10.03□□□□□ -0.8
BRCC3-206ENST00000399042 CPT1AP50416 773 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 ACTR2P61160 394 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 SEMA3FQ13275 785 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 PDIA5Q14554 519 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 PTPAQ15257 358 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 GNASQ5JWF2 1037 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 SPECC1Q5M775 1068 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 HAUS3Q68CZ6 603 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 ZNF746Q6NUN9 644 aaPredicted RBP10.03□□□□□ -0.8
BRCC3-206ENST00000399042 CCDC62Q6P9F0 684 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 RNF180Q86T96 592 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 TPH2Q8IWU9 490 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 SMAP1Q8IYB5 467 aaPredicted RBP10.03□□□□□ -0.8
BRCC3-206ENST00000399042 C4orf32Q8N8J7 132 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 TRPV1Q8NER1 839 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 SNX29Q8TEQ0 813 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 AFG1LQ8WV93 481 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 SEPT1Q8WYJ6 367 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 LENG1Q96BZ8 264 aaPredicted RBP10.03□□□□□ -0.8
BRCC3-206ENST00000399042 CALML4Q96GE6 196 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 AK8Q96MA6 479 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.03□□□□□ -0.8
BRCC3-206ENST00000399042 CSRNP2Q9H175 543 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 UNC45AQ9H3U1 944 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 CCDC39Q9UFE4 941 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 DDX20Q9UHI6 824 aaKnown RBP10.03□□□□□ -0.8
BRCC3-206ENST00000399042 PCDHA7Q9UN72 937 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 PCDHA10Q9Y5I2 948 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 ELP1O95163 1332 aa10.03□□□□□ -0.8
BRCC3-206ENST00000399042 POTEMA6NI47 508 aa10.02□□□□□ -0.81
BRCC3-206ENST00000399042 DKC1O60832 514 aaKnown RBP eCLIP10.02□□□□□ -0.81
BRCC3-206ENST00000399042 FARP2O94887 1054 aaPredicted RBP10.02□□□□□ -0.81
BRCC3-206ENST00000399042 PGK1P00558 417 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms