RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 NR2E3Q9Y5X4 410 aa33.23■■■□□ 2.91
CHCHD4-202ENST00000396914 GRIN2DO15399 1336 aa33.23■■■□□ 2.91
CHCHD4-202ENST00000396914 MROH7Q68CQ1 1323 aa33.23■■■□□ 2.91
CHCHD4-202ENST00000396914 H3BRB1 525 aa33.22■■■□□ 2.91
CHCHD4-202ENST00000396914 CHMP2AO43633 222 aa33.22■■■□□ 2.91
CHCHD4-202ENST00000396914 F2P00734 622 aa33.22■■■□□ 2.91
CHCHD4-202ENST00000396914 MCM7P33993 719 aa33.22■■■□□ 2.91
CHCHD4-202ENST00000396914 KRT76Q01546 638 aa33.22■■■□□ 2.91
CHCHD4-202ENST00000396914 KIAA0753Q2KHM9 967 aa33.22■■■□□ 2.91
CHCHD4-202ENST00000396914 RIT2Q99578 217 aa33.22■■■□□ 2.91
CHCHD4-202ENST00000396914 C16orf70Q9BSU1 422 aa33.22■■■□□ 2.91
CHCHD4-202ENST00000396914 TUT1Q9H6E5 874 aaKnown RBP33.22■■■□□ 2.91
CHCHD4-202ENST00000396914 AZI2Q9H6S1 392 aa33.22■■■□□ 2.91
CHCHD4-202ENST00000396914 ZNF215Q9UL58 517 aaPredicted RBP33.22■■■□□ 2.91
CHCHD4-202ENST00000396914 ALPK3Q96L96 1907 aa33.22■■■□□ 2.91
CHCHD4-202ENST00000396914 DCDC2CA8MYV0 355 aa33.21■■■□□ 2.91
CHCHD4-202ENST00000396914 BAG4O95429 457 aaKnown RBP33.21■■■□□ 2.91
CHCHD4-202ENST00000396914 CCNE2O96020 404 aa33.21■■■□□ 2.91
CHCHD4-202ENST00000396914 C7orf31Q8N865 590 aa33.21■■■□□ 2.91
CHCHD4-202ENST00000396914 ETNPPLQ8TBG4 499 aa33.21■■■□□ 2.91
CHCHD4-202ENST00000396914 TNRC18O15417 2968 aaPredicted RBP33.21■■■□□ 2.91
CHCHD4-202ENST00000396914 BACH1O14867 736 aa33.2■■■□□ 2.91
CHCHD4-202ENST00000396914 NEMFO60524 1076 aa33.2■■■□□ 2.91
CHCHD4-202ENST00000396914 SYT1P21579 422 aa33.2■■■□□ 2.91
CHCHD4-202ENST00000396914 BECN1Q14457 450 aa33.2■■■□□ 2.91
CHCHD4-202ENST00000396914 MIS18BP1Q6P0N0 1132 aa33.2■■■□□ 2.91
CHCHD4-202ENST00000396914 SEZ6LQ9BYH1 1024 aa33.2■■■□□ 2.91
CHCHD4-202ENST00000396914 PRDM5Q9NQX1 630 aaPredicted RBP33.2■■■□□ 2.91
CHCHD4-202ENST00000396914 WNT7AO00755 349 aa33.19■■■□□ 2.9
CHCHD4-202ENST00000396914 TLR3O15455 904 aaKnown RBP33.19■■■□□ 2.9
CHCHD4-202ENST00000396914 CDK7P50613 346 aa33.19■■■□□ 2.9
CHCHD4-202ENST00000396914 ZNF174Q15697 407 aa33.19■■■□□ 2.9
CHCHD4-202ENST00000396914 TTC38Q5R3I4 469 aa33.19■■■□□ 2.9
CHCHD4-202ENST00000396914 ZNF746Q6NUN9 644 aaPredicted RBP33.19■■■□□ 2.9
CHCHD4-202ENST00000396914 FAM20AQ96MK3 541 aa33.19■■■□□ 2.9
CHCHD4-202ENST00000396914 SMARCAD1Q9H4L7 1026 aa33.19■■■□□ 2.9
CHCHD4-202ENST00000396914 CALCRLQ16602 461 aa33.19■■■□□ 2.9
CHCHD4-202ENST00000396914 NFRKBQ6P4R8 1299 aa33.19■■■□□ 2.9
CHCHD4-202ENST00000396914 SLC43A3Q8NBI5 491 aa33.19■■■□□ 2.9
CHCHD4-202ENST00000396914 PRKAG2Q9UGJ0 569 aa33.19■■■□□ 2.9
CHCHD4-202ENST00000396914 PSMD10O75832 226 aa33.18■■■□□ 2.9
CHCHD4-202ENST00000396914 MARK3P27448 753 aa33.18■■■□□ 2.9
CHCHD4-202ENST00000396914 TRAPPC10P48553 1259 aa33.18■■■□□ 2.9
CHCHD4-202ENST00000396914 ANKRD33Q7Z3H0 272 aa33.18■■■□□ 2.9
CHCHD4-202ENST00000396914 FERMT3Q86UX7 667 aa33.18■■■□□ 2.9
CHCHD4-202ENST00000396914 SMAP1Q8IYB5 467 aaPredicted RBP33.18■■■□□ 2.9
CHCHD4-202ENST00000396914 UNC45AQ9H3U1 944 aa33.18■■■□□ 2.9
CHCHD4-202ENST00000396914 KCNMB3Q9NPA1 279 aa33.18■■■□□ 2.9
CHCHD4-202ENST00000396914 WDR64B1ANS9 1081 aa33.17■■■□□ 2.9
CHCHD4-202ENST00000396914 TBX3O15119 743 aa33.17■■■□□ 2.9
CHCHD4-202ENST00000396914 SUPT20HL2P0C7V6 817 aa33.17■■■□□ 2.9
CHCHD4-202ENST00000396914 FAM160B1Q5W0V3 765 aa33.17■■■□□ 2.9
CHCHD4-202ENST00000396914 SLFN12Q8IYM2 578 aa33.17■■■□□ 2.9
CHCHD4-202ENST00000396914 TOX2Q96NM4 488 aa33.17■■■□□ 2.9
CHCHD4-202ENST00000396914 ZMYND8Q9ULU4 1186 aaPredicted RBP33.17■■■□□ 2.9
CHCHD4-202ENST00000396914 SCN10AQ9Y5Y9 1956 aa33.17■■■□□ 2.9
CHCHD4-202ENST00000396914 PSAPP07602 524 aa33.16■■■□□ 2.9
CHCHD4-202ENST00000396914 CLTBP09497 229 aa33.16■■■□□ 2.9
CHCHD4-202ENST00000396914 STAT5BP51692 787 aa33.16■■■□□ 2.9
CHCHD4-202ENST00000396914 NBR1Q14596 966 aa33.16■■■□□ 2.9
CHCHD4-202ENST00000396914 ABHD15Q6UXT9 468 aa33.16■■■□□ 2.9
CHCHD4-202ENST00000396914 FAM126BQ8IXS8 530 aa33.16■■■□□ 2.9
CHCHD4-202ENST00000396914 TRPV6Q9H1D0 765 aa33.16■■■□□ 2.9
CHCHD4-202ENST00000396914 DISC1Q9NRI5 854 aa33.16■■■□□ 2.9
CHCHD4-202ENST00000396914 ERAP1Q9NZ08 941 aa33.16■■■□□ 2.9
CHCHD4-202ENST00000396914 HDAC6Q9UBN7 1215 aa33.16■■■□□ 2.9
CHCHD4-202ENST00000396914 NOD1Q9Y239 953 aa33.16■■■□□ 2.9
CHCHD4-202ENST00000396914 PCDHA10Q9Y5I2 948 aa33.16■■■□□ 2.9
CHCHD4-202ENST00000396914 HAS3O00219 553 aa33.15■■■□□ 2.9
CHCHD4-202ENST00000396914 ATG7O95352 703 aa33.15■■■□□ 2.9
CHCHD4-202ENST00000396914 SYN1P17600 705 aa33.15■■■□□ 2.9
CHCHD4-202ENST00000396914 SWSAP1Q6NVH7 229 aa33.15■■■□□ 2.9
CHCHD4-202ENST00000396914 MIER3Q7Z3K6 550 aa33.15■■■□□ 2.9
CHCHD4-202ENST00000396914 HAS1Q92839 578 aa33.15■■■□□ 2.9
CHCHD4-202ENST00000396914 ZNF302Q9NR11 478 aa33.15■■■□□ 2.9
CHCHD4-202ENST00000396914 TMEM39AQ9NV64 488 aa33.15■■■□□ 2.9
CHCHD4-202ENST00000396914 EMSYQ7Z589 1322 aa33.15■■■□□ 2.9
CHCHD4-202ENST00000396914 B4GALT4O60513 344 aa33.14■■■□□ 2.9
CHCHD4-202ENST00000396914 LGR5O75473 907 aa33.14■■■□□ 2.9
CHCHD4-202ENST00000396914 PTPN11Q06124 597 aaPredicted RBP33.14■■■□□ 2.9
CHCHD4-202ENST00000396914 PCYT2Q99447 389 aa33.14■■■□□ 2.9
CHCHD4-202ENST00000396914 TRMT13Q9NUP7 481 aaKnown RBP33.14■■■□□ 2.9
CHCHD4-202ENST00000396914 STX6O43752 255 aa33.13■■■□□ 2.89
CHCHD4-202ENST00000396914 SFNP31947 248 aa33.13■■■□□ 2.89
CHCHD4-202ENST00000396914 TXKP42681 527 aa33.13■■■□□ 2.89
CHCHD4-202ENST00000396914 JAK3P52333 1124 aa33.13■■■□□ 2.89
CHCHD4-202ENST00000396914 FAAP100Q0VG06 881 aa33.13■■■□□ 2.89
CHCHD4-202ENST00000396914 RILPL1Q5EBL4 403 aa33.13■■■□□ 2.89
CHCHD4-202ENST00000396914 SMIM10L2AP0DMW4 78 aa33.12■■■□□ 2.89
CHCHD4-202ENST00000396914 SMIM10L2BP0DMW5 78 aa33.12■■■□□ 2.89
CHCHD4-202ENST00000396914 TOB1P50616 345 aaPredicted RBP33.12■■■□□ 2.89
CHCHD4-202ENST00000396914 PDXDC2PQ6P474 469 aa33.12■■■□□ 2.89
CHCHD4-202ENST00000396914 CKAP2LQ8IYA6 745 aa33.12■■■□□ 2.89
CHCHD4-202ENST00000396914 RNPEPQ9H4A4 650 aa33.12■■■□□ 2.89
CHCHD4-202ENST00000396914 PDLIM7Q9NR12 457 aa33.12■■■□□ 2.89
CHCHD4-202ENST00000396914 PCDHA12Q9UN75 941 aa33.12■■■□□ 2.89
CHCHD4-202ENST00000396914 TRPC6Q9Y210 931 aa33.12■■■□□ 2.89
CHCHD4-202ENST00000396914 PCDHB6Q9Y5E3 794 aa33.12■■■□□ 2.89
CHCHD4-202ENST00000396914 ORC2Q13416 577 aaPredicted RBP33.11■■■□□ 2.89
CHCHD4-202ENST00000396914 PTGISQ16647 500 aa33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms