RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 FOXN1O15353 648 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 DHX15O43143 795 aaKnown RBP11.09□□□□□ -0.63
DDX39B-202ENST00000396172 FARP2O94887 1054 aaPredicted RBP11.09□□□□□ -0.63
DDX39B-202ENST00000396172 PSAPP07602 524 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 ZNF865P0CJ78 1059 aaPredicted RBP11.09□□□□□ -0.63
DDX39B-202ENST00000396172 GRK4P32298 578 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 TNFAIP2Q03169 654 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 EPHA7Q15375 998 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 PKN2Q16513 984 aaKnown RBP11.09□□□□□ -0.63
DDX39B-202ENST00000396172 IL17AQ16552 155 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 CCDC144BQ3MJ40 725 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 BRDTQ58F21 947 aaPredicted RBP11.09□□□□□ -0.63
DDX39B-202ENST00000396172 CELF3Q5SZQ8 465 aaKnown RBP11.09□□□□□ -0.63
DDX39B-202ENST00000396172 MIS18BP1Q6P0N0 1132 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 B3GNT9Q6UX72 402 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 CTU1Q7Z7A3 348 aaKnown RBP11.09□□□□□ -0.63
DDX39B-202ENST00000396172 CABP7Q86V35 215 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 UNC45AQ9H3U1 944 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 TUFT1Q9NNX1 390 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 USP25Q9UHP3 1055 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 SAMM50Q9Y512 469 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 DDX49Q9Y6V7 483 aaKnown RBP11.09□□□□□ -0.63
DDX39B-202ENST00000396172 DDX39AO00148 427 aaKnown RBP11.08□□□□□ -0.64
DDX39B-202ENST00000396172 CHMP2AO43633 222 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 MSCO60682 206 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 ATP9AO75110 1047 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 ADCYAP1R1P41586 468 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 FAM160A1Q05DH4 1040 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 LY6KQ17RY6 165 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 SHC4Q6S5L8 630 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 CYFIP1Q7L576 1253 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 POLR3CQ9BUI4 534 aaPredicted RBP11.08□□□□□ -0.64
DDX39B-202ENST00000396172 MAGEF1Q9HAY2 307 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 DISC1Q9NRI5 854 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 PTPN22Q9Y2R2 807 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 PCDHA10Q9Y5I2 948 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 SEPT4O43236 478 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 ARIH2O95376 493 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 PRKAR2AP13861 404 aaKnown RBP11.08□□□□□ -0.64
DDX39B-202ENST00000396172 PFKFB1P16118 471 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 RPA1P27694 616 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 CCT6AP40227 531 aaKnown RBP11.08□□□□□ -0.64
DDX39B-202ENST00000396172 CAP1Q01518 475 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 GRIN1Q05586 938 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 FAM160B1Q5W0V3 765 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 OR6J1Q8NGC5 347 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 PPTC7Q8NI37 304 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 ATP6V0A1Q93050 837 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 CUEDC2Q9H467 287 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 SPC25Q9HBM1 224 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 PDGFCQ9NRA1 345 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 STK17AQ9UEE5 414 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 KCNH3Q9ULD8 1083 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 PTCH2Q9Y6C5 1203 aa11.08□□□□□ -0.64
DDX39B-202ENST00000396172 CEP350Q5VT06 3117 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 P4HBP07237 508 aaKnown RBP11.07□□□□□ -0.64
DDX39B-202ENST00000396172 ELNP15502 786 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 SYKP43405 635 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 CPT1AP50416 773 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 ACTR2P61160 394 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 SP2Q02086 613 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 CACNB2Q08289 660 aaPredicted RBP11.07□□□□□ -0.64
DDX39B-202ENST00000396172 HYIQ5T013 277 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 MAP3K21Q5TCX8 1036 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 GAS2L3Q86XJ1 694 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 SEPT1Q8WYJ6 367 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 GJA10Q969M2 543 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 SYAP1Q96A49 352 aaPredicted RBP11.07□□□□□ -0.64
DDX39B-202ENST00000396172 SPATA33Q96N06 139 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 EIF2AK1Q9BQI3 630 aaKnown RBP11.07□□□□□ -0.64
DDX39B-202ENST00000396172 AP5M1Q9H0R1 490 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 DDX19AQ9NUU7 478 aaKnown RBP11.07□□□□□ -0.64
DDX39B-202ENST00000396172 HPSEQ9Y251 543 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 EMSYQ7Z589 1322 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 PCNTO95613 3336 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 SCN10AQ9Y5Y9 1956 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 EVPLQ92817 2033 aa11.07□□□□□ -0.64
DDX39B-202ENST00000396172 KINO60870 393 aaKnown RBP11.06□□□□□ -0.64
DDX39B-202ENST00000396172 GADD45BO75293 160 aaPredicted RBP11.06□□□□□ -0.64
DDX39B-202ENST00000396172 DUSP11O75319 330 aaKnown RBP11.06□□□□□ -0.64
DDX39B-202ENST00000396172 INHAP05111 366 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 SUPT20HL2P0C7V6 817 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 RARBP10826 455 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 SMPD1P17405 629 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 STAT6P42226 847 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 ARHGAP1Q07960 439 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 SLC9C1Q4G0N8 1177 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 TLK2Q86UE8 772 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 IQUBQ8NA54 791 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 EPSTI1Q96J88 318 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 UIMC1Q96RL1 719 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 AZI2Q9H6S1 392 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 HOOK1Q9UJC3 728 aaKnown RBP11.06□□□□□ -0.64
DDX39B-202ENST00000396172 A0A1B0GVL5 298 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 ATG7O95352 703 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 CCNE2O96020 404 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 CNGA1P29973 690 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 QARSP47897 775 aaKnown RBP11.06□□□□□ -0.64
DDX39B-202ENST00000396172 SLC26A2P50443 739 aa11.06□□□□□ -0.64
DDX39B-202ENST00000396172 LBX1P52954 281 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms