RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 EPHB4P54760 987 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 USP17L24Q0WX57 530 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 USP17L6PQ6QN14 398 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 TRIM59Q8IWR1 403 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 SCFD1Q8WVM8 642 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 PACSIN1Q9BY11 444 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 PSTPIP2Q9H939 334 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 NRXN2Q9P2S2 1712 aa13.76□□□□□ -0.21
PPP3CB-204ENST00000394829 A0A087X0T9 212 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 ESYT3A0FGR9 886 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 SHOX2O60902 331 aaPredicted RBP13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 PLA2G4BP0C869 781 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 FAM228BP0C875 321 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 RAPGEF1Q13905 1077 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 CRY2Q49AN0 593 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 CFAP221Q4G0U5 840 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 HERC4Q5GLZ8 1057 aaPredicted RBP13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 FOXR2Q6PJQ5 311 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 FAM133AQ8N9E0 248 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 SH3GL2Q99962 352 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 RABEP2Q9H5N1 569 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 BMP2KQ9NSY1 1161 aaPredicted RBP13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 ATP6V0A2Q9Y487 856 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 RIMBP2O15034 1052 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 STAT3P40763 770 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 MRPL12P52815 198 aaKnown RBP13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 RNASE9P60153 205 aaKnown RBP13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 DDR1Q08345 913 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 GPBP1Q86WP2 473 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 TBC1D22AQ8WUA7 517 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 RUBCNQ92622 972 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 ARL8AQ96BM9 186 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 KCTD10Q9H3F6 313 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 ADAMTS1Q9UHI8 967 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 CARSP49589 748 aaKnown RBP13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 IRAK1P51617 712 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 SEPT2Q15019 361 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 NAB2Q15742 525 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 DNAJC21Q5F1R6 531 aaKnown RBP13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 HYIQ5T013 277 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 TTC19Q6DKK2 380 aaPredicted RBP13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 PPP1R18Q6NYC8 613 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 EMBQ6PCB8 327 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 MXD3Q9BW11 206 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 ZHX3Q9H4I2 956 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 EFCC1Q9HA90 598 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 EMILIN3Q9NT22 766 aa13.75□□□□□ -0.21
PPP3CB-204ENST00000394829 ATAD5Q96QE3 1844 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 MPHOSPH10O00566 681 aaKnown RBP13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 ZBTB5O15062 677 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 FAM153BP0C7A2 387 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 SHMT1P34896 483 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 ADAM9Q13443 819 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 SLC18A3Q16572 532 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 FAM153CQ494X1 144 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 TTMPQ5BVD1 217 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 CCDC65Q8IXS2 484 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 SYN2Q92777 582 aaPredicted RBP13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 CEP63Q96MT8 703 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 NT5C3AQ9H0P0 336 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 GEMIN8Q9NWZ8 242 aaKnown RBP13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 FAM153AQ9UHL3 310 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 SERPINB13Q9UIV8 391 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 NFU1Q9UMS0 254 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 RAD21O60216 631 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 CYP11B2P19099 503 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 KIAA0753Q2KHM9 967 aa13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 RBM17Q96I25 401 aaKnown RBP13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 NUCKS1Q9H1E3 243 aaKnown RBP13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 ATF5Q9Y2D1 282 aaPredicted RBP13.74□□□□□ -0.21
PPP3CB-204ENST00000394829 POLRMTO00411 1230 aaKnown RBP13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 MED24O75448 989 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 SERPINB2P05120 415 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 ACTN1P12814 892 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 CASP5P51878 434 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 ARSHQ5FYA8 562 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 DNAAF5Q86Y56 855 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 IFT81Q8WYA0 676 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 CAVIN3Q969G5 261 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 ZIM3Q96PE6 472 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 EPB41L5Q9HCM4 733 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 KDM3AQ9Y4C1 1321 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 ADAMTSL1Q8N6G6 1762 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 POTEFA5A3E0 1075 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 GOLGA8KD6RF30 607 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 HEXIM1O94992 359 aaKnown RBP13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 BRD2P25440 801 aaKnown RBP13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 TNFRSF8P28908 595 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 MARSP56192 900 aaKnown RBP13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 GUCY2DQ02846 1103 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 KLHL30Q0D2K2 578 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 KCNH2Q12809 1159 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 PPFIA1Q13136 1202 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 TRADDQ15628 312 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 ICE2Q659A1 982 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 POTEGQ6S5H5 508 aa13.73□□□□□ -0.21
PPP3CB-204ENST00000394829 POTEEQ6S8J3 1075 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms