RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 MYOZ2Q9NPC6 264 aa10.02□□□□□ -0.81
TDP1-202ENST00000393452 TBC1D7Q9P0N9 293 aa10.02□□□□□ -0.81
TDP1-202ENST00000393452 DDX41Q9UJV9 622 aaKnown RBP10.02□□□□□ -0.81
TDP1-202ENST00000393452 MEIS1O00470 390 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 EYA4O95677 639 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 ZNF280AP59817 542 aaPredicted RBP10.01□□□□□ -0.81
TDP1-202ENST00000393452 LDHDQ86WU2 507 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 PCMTD1Q96MG8 357 aaPredicted RBP10.01□□□□□ -0.81
TDP1-202ENST00000393452 ARID3AQ99856 593 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 TUFT1Q9NNX1 390 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 FBXO28Q9NVF7 368 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 TRAF3IP3Q9Y228 551 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 KRT18P05783 430 aaKnown RBP10.01□□□□□ -0.81
TDP1-202ENST00000393452 MUTP22033 750 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 CASP5P51878 434 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 AMPD2Q01433 879 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 RAD51AP2Q09MP3 1159 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 KCNMA1Q12791 1236 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 ZYXQ15942 572 aaKnown RBP10.01□□□□□ -0.81
TDP1-202ENST00000393452 CEP55Q53EZ4 464 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 B3GNT9Q6UX72 402 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 BAP1Q92560 729 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 RABGGTAQ92696 567 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 TEPSINQ96N21 525 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 NAPGQ99747 312 aaPredicted RBP10.01□□□□□ -0.81
TDP1-202ENST00000393452 TAOK3Q9H2K8 898 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 EHMT1Q9H9B1 1298 aa10.01□□□□□ -0.81
TDP1-202ENST00000393452 FAM207AQ9NSI2 230 aaPredicted RBP10.01□□□□□ -0.81
TDP1-202ENST00000393452 LOXHD1Q8IVV2 1947 aa10□□□□□ -0.81
TDP1-202ENST00000393452 SHTN1A0MZ66 631 aa10□□□□□ -0.81
TDP1-202ENST00000393452 HOXD13P35453 343 aa10□□□□□ -0.81
TDP1-202ENST00000393452 HSD17B4P51659 736 aa10□□□□□ -0.81
TDP1-202ENST00000393452 CLCN6P51797 869 aa10□□□□□ -0.81
TDP1-202ENST00000393452 GHRHRQ02643 423 aa10□□□□□ -0.81
TDP1-202ENST00000393452 CYP4A11Q02928 519 aa10□□□□□ -0.81
TDP1-202ENST00000393452 RASA3Q14644 834 aa10□□□□□ -0.81
TDP1-202ENST00000393452 BMT2Q1RMZ1 405 aa10□□□□□ -0.81
TDP1-202ENST00000393452 LRCH2Q5VUJ6 765 aa10□□□□□ -0.81
TDP1-202ENST00000393452 SRGAP1Q7Z6B7 1085 aa10□□□□□ -0.81
TDP1-202ENST00000393452 SFR1Q86XK3 245 aa10□□□□□ -0.81
TDP1-202ENST00000393452 NELFCDQ8IXH7 590 aa10□□□□□ -0.81
TDP1-202ENST00000393452 GPR161Q8N6U8 529 aaKnown RBP10□□□□□ -0.81
TDP1-202ENST00000393452 PURBQ96QR8 312 aaKnown RBP10□□□□□ -0.81
TDP1-202ENST00000393452 BHMT2Q9H2M3 363 aa10□□□□□ -0.81
TDP1-202ENST00000393452 GINM1Q9NU53 330 aa10□□□□□ -0.81
TDP1-202ENST00000393452 ZNF446Q9NWS9 450 aa10□□□□□ -0.81
TDP1-202ENST00000393452 FAM53CQ9NYF3 392 aa10□□□□□ -0.81
TDP1-202ENST00000393452 RGL1Q9NZL6 768 aa10□□□□□ -0.81
TDP1-202ENST00000393452 OGFRQ9NZT2 677 aa10□□□□□ -0.81
TDP1-202ENST00000393452 GUCA1BQ9UMX6 200 aa10□□□□□ -0.81
TDP1-202ENST00000393452 RABGAP1Q9Y3P9 1069 aa10□□□□□ -0.81
TDP1-202ENST00000393452 ZNF536O15090 1300 aa10□□□□□ -0.81
TDP1-202ENST00000393452 ZNF263O14978 683 aa10□□□□□ -0.81
TDP1-202ENST00000393452 KRT86O43790 486 aa10□□□□□ -0.81
TDP1-202ENST00000393452 SLITRK3O94933 977 aa10□□□□□ -0.81
TDP1-202ENST00000393452 LCA5LO95447 670 aa10□□□□□ -0.81
TDP1-202ENST00000393452 ICAM1P05362 532 aa10□□□□□ -0.81
TDP1-202ENST00000393452 KNOP1Q1ED39 458 aaKnown RBP10□□□□□ -0.81
TDP1-202ENST00000393452 CCDC40Q4G0X9 1142 aa10□□□□□ -0.81
TDP1-202ENST00000393452 DALRD3Q5D0E6 543 aaKnown RBP10□□□□□ -0.81
TDP1-202ENST00000393452 CCDC122Q5T0U0 273 aa10□□□□□ -0.81
TDP1-202ENST00000393452 CEP112Q8N8E3 955 aa10□□□□□ -0.81
TDP1-202ENST00000393452 JDP2Q8WYK2 163 aa10□□□□□ -0.81
TDP1-202ENST00000393452 LPAR1Q92633 364 aa10□□□□□ -0.81
TDP1-202ENST00000393452 RUSC1Q9BVN2 902 aa10□□□□□ -0.81
TDP1-202ENST00000393452 MMRN2Q9H8L6 949 aa10□□□□□ -0.81
TDP1-202ENST00000393452 OLFML3Q9NRN5 406 aa10□□□□□ -0.81
TDP1-202ENST00000393452 ARHGAP20Q9P2F6 1191 aa10□□□□□ -0.81
TDP1-202ENST00000393452 TRIM10Q9UDY6 481 aa10□□□□□ -0.81
TDP1-202ENST00000393452 FAM184BQ9ULE4 1060 aa10□□□□□ -0.81
TDP1-202ENST00000393452 RPTORQ8N122 1335 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 RCCD1A6NED2 376 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 PDXKO00764 312 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 WDR46O15213 610 aaKnown RBP9.99□□□□□ -0.81
TDP1-202ENST00000393452 RPS12P25398 132 aaKnown RBP9.99□□□□□ -0.81
TDP1-202ENST00000393452 INPP5BP32019 993 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 SETQ01105 290 aaPredicted RBP9.99□□□□□ -0.81
TDP1-202ENST00000393452 ADAM9Q13443 819 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 TNFAIP1Q13829 316 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 TNIP1Q15025 636 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 RINT1Q6NUQ1 792 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 EHBP1Q8NDI1 1231 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 GOLGA1Q92805 767 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 ZNF341Q9BYN7 854 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 LACRTQ9GZZ8 138 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 KIAA1683Q9H0B3 1180 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 MYH10P35580 1976 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 LRRC53A6NM62 1247 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 NFKBIEO00221 500 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 NOL4O94818 638 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 IPO7O95373 1038 aaKnown RBP9.99□□□□□ -0.81
TDP1-202ENST00000393452 PLEKP08567 350 aaPredicted RBP9.99□□□□□ -0.81
TDP1-202ENST00000393452 BCRP11274 1271 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 ERCC3P19447 782 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 NR2F2P24468 414 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 PRELPP51888 382 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 VAV2P52735 878 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 CHMP4BP1P59074 171 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 TUBB4BP68371 445 aa9.99□□□□□ -0.81
TDP1-202ENST00000393452 WHAMMP3Q1A5X7 153 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms