RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 NUDT5Q9UKK9 219 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 PALD1Q9ULE6 856 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 PCDHB4Q9Y5E5 795 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 SPO11Q9Y5K1 396 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 B3GALT1Q9Y5Z6 326 aa4.29□□□□□ -1.72
PTPRC-205ENST00000391970 TCRBV5S2A0A599 114 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 F8W031 263 aaPredicted RBP4.28□□□□□ -1.72
PTPRC-205ENST00000391970 PRKD3O94806 890 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 LTFP02788 710 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 MPOP05164 745 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 PTPN1P18031 435 aaKnown RBP4.28□□□□□ -1.72
PTPRC-205ENST00000391970 SLC9A1P19634 815 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 GJA4P35212 333 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 KIF11P52732 1056 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 TUSC3Q13454 348 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 NR1I3Q14994 352 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 ZNF174Q15697 407 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 ODR4Q5SWX8 454 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 IQSEC1Q6DN90 963 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 RPTNQ6XPR3 784 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 EP400NLQ6ZTU2 488 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 ATG4DQ86TL0 474 aaPredicted RBP4.28□□□□□ -1.72
PTPRC-205ENST00000391970 TRIM48Q8IWZ4 208 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 RBM12BQ8IXT5 1001 aaKnown RBP4.28□□□□□ -1.72
PTPRC-205ENST00000391970 TTLL11Q8NHH1 800 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 SLC5A5Q92911 643 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 MTMR8Q96EF0 704 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 TSPAN17Q96FV3 270 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 SCYL1Q96KG9 808 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 TRIM8Q9BZR9 551 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 SLC6A17Q9H1V8 727 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 PCIF1Q9H4Z3 704 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 KCNH7Q9NS40 1196 aa4.28□□□□□ -1.72
PTPRC-205ENST00000391970 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.27□□□□□ -1.73
PTPRC-205ENST00000391970 FAM90A27PA6NNH2 459 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 NUDT19A8MXV4 375 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 K7ESF4 209 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 BUB1BO60566 1050 aaPredicted RBP4.27□□□□□ -1.73
PTPRC-205ENST00000391970 ZBTB7AO95365 584 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 C4BPAP04003 597 aaKnown RBP4.27□□□□□ -1.73
PTPRC-205ENST00000391970 SDHBP21912 280 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 MAPKAPK2P49137 400 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 SESN3P58005 492 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 PHC1P78364 1004 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 SMAD3P84022 425 aaKnown RBP4.27□□□□□ -1.73
PTPRC-205ENST00000391970 ITKQ08881 620 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 SLC9A5Q14940 896 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 RAB3GAP1Q15042 981 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 TERF2Q15554 542 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 SMAD2Q15796 467 aaKnown RBP4.27□□□□□ -1.73
PTPRC-205ENST00000391970 DDB1Q16531 1140 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 PLEKHN1Q494U1 663 aaPredicted RBP4.27□□□□□ -1.73
PTPRC-205ENST00000391970 ADGRF1Q5T601 910 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 CC2D1AQ6P1N0 951 aaPredicted RBP4.27□□□□□ -1.73
PTPRC-205ENST00000391970 HDGFL2Q7Z4V5 671 aaPredicted RBP4.27□□□□□ -1.73
PTPRC-205ENST00000391970 MILR1Q7Z6M3 343 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 PASD1Q8IV76 773 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 CNTD1Q8N815 330 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 CLRN3Q8NCR9 226 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 ARRDC4Q8NCT1 418 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 CLEC4DQ8WXI8 215 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 ELF4Q99607 663 aaPredicted RBP4.27□□□□□ -1.73
PTPRC-205ENST00000391970 ZFP64Q9NPA5 681 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 ACSS2Q9NR19 701 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 RIC8BQ9NVN3 520 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 DBR1Q9UK59 544 aaKnown RBP4.27□□□□□ -1.73
PTPRC-205ENST00000391970 TRHDEQ9UKU6 1024 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 HCFC2Q9Y5Z7 792 aa4.27□□□□□ -1.73
PTPRC-205ENST00000391970 OAS3Q9Y6K5 1087 aaKnown RBP4.27□□□□□ -1.73
PTPRC-205ENST00000391970 OR14I1A6ND48 311 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 ACOT7O00154 380 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 ALDH1L1O75891 902 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 CYP17A1P05093 508 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 SDHAP31040 664 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 FNTBP49356 437 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 ERVK-21P61565 698 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 PRR5P85299 388 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 FAPQ12884 760 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 CATSPEREQ5SY80 951 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 GPR158Q5T848 1215 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 SYDE2Q5VT97 1194 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 BROXQ5VW32 411 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 BTBD8Q5XKL5 378 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 ESRP1Q6NXG1 681 aaKnown RBP4.26□□□□□ -1.73
PTPRC-205ENST00000391970 MIB1Q86YT6 1006 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 IRF2BP1Q8IU81 584 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 JDP2Q8WYK2 163 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 MENTQ9BUN1 341 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 CCDC8Q9H0W5 538 aaPredicted RBP4.26□□□□□ -1.73
PTPRC-205ENST00000391970 ZMAT4Q9H898 229 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 VTA1Q9NP79 307 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 TOMM22Q9NS69 142 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 KLHL14Q9P2G3 628 aa4.26□□□□□ -1.73
PTPRC-205ENST00000391970 G3BP2Q9UN86 482 aaKnown RBP4.26□□□□□ -1.73
PTPRC-205ENST00000391970 THRAP3Q9Y2W1 955 aaKnown RBP4.26□□□□□ -1.73
PTPRC-205ENST00000391970 PRAMEF25A6NGN4 478 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 RASSF10A6NK89 507 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 GABRDO14764 452 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 FOXP2O15409 715 aa4.25□□□□□ -1.73
PTPRC-205ENST00000391970 GLI1P08151 1106 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms