RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 RILPQ96NA2 401 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 TEKT3Q9BXF9 490 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 GOLPH3LQ9H4A5 285 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.12□□□□□ -0.95
VPS36-201ENST00000378060 K7ENM7 598 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 MYO1CO00159 1063 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 CTNND1O60716 968 aaKnown RBP9.12□□□□□ -0.95
VPS36-201ENST00000378060 MFAP3P55082 362 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 CYP27A1Q02318 531 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 PPARDQ03181 441 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 PTK2Q05397 1052 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 ODR4Q5SWX8 454 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 FAM186BQ8IYM0 893 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 MIPOL1Q8TD10 442 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 LRRC8CQ8TDW0 803 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 TACO1Q9BSH4 297 aaKnown RBP9.12□□□□□ -0.95
VPS36-201ENST00000378060 BRIP1Q9BX63 1249 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 GPHNQ9NQX3 736 aaPredicted RBP9.12□□□□□ -0.95
VPS36-201ENST00000378060 PICK1Q9NRD5 415 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 ABHD10Q9NUJ1 306 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 ADGRG1Q9Y653 693 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 COL24A1Q17RW2 1714 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 FRMPD2Q68DX3 1309 aaPredicted RBP9.12□□□□□ -0.95
VPS36-201ENST00000378060 LAMB2P55268 1798 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 PRKAB2O43741 272 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 PLCG1P19174 1290 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 NSFP46459 744 aaKnown RBP9.12□□□□□ -0.95
VPS36-201ENST00000378060 DHX9Q08211 1270 aaKnown RBP9.12□□□□□ -0.95
VPS36-201ENST00000378060 C2orf54Q08AI8 447 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 PTPN21Q16825 1174 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 MB21D2Q8IYB1 491 aaPredicted RBP9.12□□□□□ -0.95
VPS36-201ENST00000378060 LRRC47Q8N1G4 583 aaKnown RBP9.12□□□□□ -0.95
VPS36-201ENST00000378060 HAUS1Q96CS2 278 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 AZI2Q9H6S1 392 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 SEC31BQ9NQW1 1179 aa9.12□□□□□ -0.95
VPS36-201ENST00000378060 POLRMTO00411 1230 aaKnown RBP9.11□□□□□ -0.95
VPS36-201ENST00000378060 DAPK3O43293 454 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 MOCS3O95396 460 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 PDE6BP35913 854 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 TCP10Q12799 353 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 CERKLQ49MI3 558 aaPredicted RBP9.11□□□□□ -0.95
VPS36-201ENST00000378060 NAA35Q5VZE5 725 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 ARHGEF18Q6ZSZ5 1173 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 TTLL11Q8NHH1 800 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 DEPTORQ8TB45 409 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 NEK9Q8TD19 979 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 RASGRP4Q8TDF6 673 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 NT5C1BQ96P26 610 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 GBP5Q96PP8 586 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 UIMC1Q96RL1 719 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 ZNF148Q9UQR1 794 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 EIF3CLB5ME19 914 aaKnown RBP9.11□□□□□ -0.95
VPS36-201ENST00000378060 CASQ2O14958 399 aaPredicted RBP9.11□□□□□ -0.95
VPS36-201ENST00000378060 COBLO75128 1261 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 ADRA2BP18089 450 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 GCKP35557 465 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 VPS41P49754 854 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 MYL7Q01449 175 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 SF3A3Q12874 501 aaKnown RBP eCLIP9.11□□□□□ -0.95
VPS36-201ENST00000378060 MESDQ14696 234 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 GNPTABQ3T906 1256 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 ADAT2Q7Z6V5 191 aaKnown RBP9.11□□□□□ -0.95
VPS36-201ENST00000378060 EIF3CQ99613 913 aaKnown RBP9.11□□□□□ -0.95
VPS36-201ENST00000378060 HINFPQ9BQA5 517 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 WDR11Q9BZH6 1224 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 PIH1D3Q9NQM4 214 aaKnown RBP9.11□□□□□ -0.95
VPS36-201ENST00000378060 EMILIN3Q9NT22 766 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 ODF2LQ9ULJ1 636 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 ATP8A1Q9Y2Q0 1164 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 SERPINB2P05120 415 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 ICA1Q05084 483 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 BFSP1Q12934 665 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 RASA3Q14644 834 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 IQCB1Q15051 598 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 ZYXQ15942 572 aaKnown RBP9.11□□□□□ -0.95
VPS36-201ENST00000378060 CDC37Q16543 378 aaPredicted RBP9.11□□□□□ -0.95
VPS36-201ENST00000378060 PRR5LQ6MZQ0 368 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 TMTC3Q6ZXV5 915 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 MCF2L2Q86YR7 1114 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 PPP4R1Q8TF05 950 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 PSMD1Q99460 953 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 MXD3Q9BW11 206 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 NUF2Q9BZD4 464 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 MYH3P11055 1940 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 NOP56O00567 594 aaKnown RBP9.11□□□□□ -0.95
VPS36-201ENST00000378060 SART1O43290 800 aaKnown RBP9.11□□□□□ -0.95
VPS36-201ENST00000378060 CDC25AP30304 524 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 TM4SF1P30408 202 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 CXCR5P32302 372 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 PLTPP55058 493 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 PABPC4Q13310 644 aaKnown RBP eCLIP9.11□□□□□ -0.95
VPS36-201ENST00000378060 RASGRF1Q13972 1273 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 ALKBH5Q6P6C2 394 aaKnown RBP9.11□□□□□ -0.95
VPS36-201ENST00000378060 CLEC4GQ6UXB4 293 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 TOGARAM2Q6ZUX3 1019 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 SGMS1Q86VZ5 419 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 UHMK1Q8TAS1 419 aaKnown RBP9.11□□□□□ -0.95
VPS36-201ENST00000378060 FMO2Q99518 471 aa9.11□□□□□ -0.95
VPS36-201ENST00000378060 DIS3Q9Y2L1 958 aaKnown RBP9.11□□□□□ -0.95
VPS36-201ENST00000378060 UTYO14607 1347 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms