RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 ORC3Q9UBD5 711 aaPredicted RBP22.79■■□□□ 1.24
TMEM53-205ENST00000372244 ATG7O95352 703 aa22.78■■□□□ 1.24
TMEM53-205ENST00000372244 SLC34A2O95436 690 aa22.78■■□□□ 1.24
TMEM53-205ENST00000372244 SMIM10L2AP0DMW4 78 aa22.78■■□□□ 1.24
TMEM53-205ENST00000372244 SMIM10L2BP0DMW5 78 aa22.78■■□□□ 1.24
TMEM53-205ENST00000372244 RBL2Q08999 1139 aa22.78■■□□□ 1.24
TMEM53-205ENST00000372244 BFSP2Q13515 415 aa22.78■■□□□ 1.24
TMEM53-205ENST00000372244 UTP14CQ5TAP6 766 aaKnown RBP22.78■■□□□ 1.24
TMEM53-205ENST00000372244 RASIP1Q5U651 963 aa22.78■■□□□ 1.24
TMEM53-205ENST00000372244 ZNF365Q70YC5 407 aa22.78■■□□□ 1.24
TMEM53-205ENST00000372244 CAGE1Q8TC20 777 aa22.78■■□□□ 1.24
TMEM53-205ENST00000372244 LENG9Q96B70 501 aa22.78■■□□□ 1.24
TMEM53-205ENST00000372244 SDF4Q9BRK5 362 aa22.78■■□□□ 1.24
TMEM53-205ENST00000372244 KCNJ14Q9UNX9 436 aa22.78■■□□□ 1.24
TMEM53-205ENST00000372244 DOCK5Q9H7D0 1870 aa22.77■■□□□ 1.24
TMEM53-205ENST00000372244 IPO5O00410 1097 aaKnown RBP22.77■■□□□ 1.24
TMEM53-205ENST00000372244 LGR5O75473 907 aa22.77■■□□□ 1.24
TMEM53-205ENST00000372244 IQCF3P0C7M6 154 aa22.77■■□□□ 1.24
TMEM53-205ENST00000372244 ACRP10323 421 aa22.77■■□□□ 1.24
TMEM53-205ENST00000372244 ST3GAL1Q11201 340 aa22.77■■□□□ 1.24
TMEM53-205ENST00000372244 PTK7Q13308 1070 aa22.77■■□□□ 1.24
TMEM53-205ENST00000372244 RETREG2Q8NC44 543 aa22.77■■□□□ 1.24
TMEM53-205ENST00000372244 WASF1Q92558 559 aa22.77■■□□□ 1.24
TMEM53-205ENST00000372244 SCLYQ96I15 445 aa22.77■■□□□ 1.24
TMEM53-205ENST00000372244 PCYT2Q99447 389 aa22.77■■□□□ 1.24
TMEM53-205ENST00000372244 ZNF215Q9UL58 517 aaPredicted RBP22.77■■□□□ 1.24
TMEM53-205ENST00000372244 XBP1P17861 261 aa22.76■■□□□ 1.23
TMEM53-205ENST00000372244 ACTR2P61160 394 aa22.76■■□□□ 1.23
TMEM53-205ENST00000372244 ADAM17P78536 824 aa22.76■■□□□ 1.23
TMEM53-205ENST00000372244 SERINC5Q86VE9 423 aa22.76■■□□□ 1.23
TMEM53-205ENST00000372244 RPUSD2Q8IZ73 545 aaKnown RBP22.76■■□□□ 1.23
TMEM53-205ENST00000372244 TBCKQ8TEA7 893 aa22.76■■□□□ 1.23
TMEM53-205ENST00000372244 SMARCAD1Q9H4L7 1026 aa22.76■■□□□ 1.23
TMEM53-205ENST00000372244 GJB4Q9NTQ9 266 aa22.76■■□□□ 1.23
TMEM53-205ENST00000372244 CYP3A7-CYP3A51PA0A087WV96 503 aa22.75■■□□□ 1.23
TMEM53-205ENST00000372244 CCNE2O96020 404 aa22.75■■□□□ 1.23
TMEM53-205ENST00000372244 CYP3A7P24462 503 aa22.75■■□□□ 1.23
TMEM53-205ENST00000372244 SETQ01105 290 aaPredicted RBP22.75■■□□□ 1.23
TMEM53-205ENST00000372244 TRIM71Q2Q1W2 868 aaKnown RBP22.75■■□□□ 1.23
TMEM53-205ENST00000372244 PRR16Q569H4 304 aa22.75■■□□□ 1.23
TMEM53-205ENST00000372244 PSRC1Q6PGN9 363 aaPredicted RBP22.75■■□□□ 1.23
TMEM53-205ENST00000372244 RNPC3Q96LT9 517 aaKnown RBP22.75■■□□□ 1.23
TMEM53-205ENST00000372244 TBC1D22BQ9NU19 505 aa22.75■■□□□ 1.23
TMEM53-205ENST00000372244 IGKV6D-21A0A0A0MT36 114 aa22.74■■□□□ 1.23
TMEM53-205ENST00000372244 C17orf102A2RUQ5 167 aa22.74■■□□□ 1.23
TMEM53-205ENST00000372244 CCDC155Q8N6L0 562 aa22.74■■□□□ 1.23
TMEM53-205ENST00000372244 AFAP1L1Q8TED9 768 aa22.74■■□□□ 1.23
TMEM53-205ENST00000372244 HERVK_113Q902F9 699 aa22.74■■□□□ 1.23
TMEM53-205ENST00000372244 WNT8BQ93098 351 aa22.74■■□□□ 1.23
TMEM53-205ENST00000372244 ZNF577Q9BSK1 485 aa22.74■■□□□ 1.23
TMEM53-205ENST00000372244 SETD4Q9NVD3 440 aa22.74■■□□□ 1.23
TMEM53-205ENST00000372244 ERAP1Q9NZ08 941 aa22.74■■□□□ 1.23
TMEM53-205ENST00000372244 EMSYQ7Z589 1322 aa22.74■■□□□ 1.23
TMEM53-205ENST00000372244 FGBP02675 491 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 GNAT1P11488 350 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 CKBP12277 381 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 RFC2P35250 354 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 GPNMBQ14956 572 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 ABHD15Q6UXT9 468 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 PLPPR4Q7Z2D5 763 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 IL27Q8NEV9 243 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 GLG1Q92896 1179 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 ATP6V0A1Q93050 837 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 ZSCAN31Q96LW9 406 aaPredicted RBP22.73■■□□□ 1.23
TMEM53-205ENST00000372244 NRCAMQ92823 1304 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 TREHO43280 583 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 JAK2O60674 1132 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 PFKMP08237 780 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 SELPP16109 830 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 TRAF7Q6Q0C0 670 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 KRT25Q7Z3Z0 450 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 OXER1Q8TDS5 423 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 MBOAT7Q96N66 472 aa22.73■■□□□ 1.23
TMEM53-205ENST00000372244 STAT5BP51692 787 aa22.72■■□□□ 1.23
TMEM53-205ENST00000372244 SMAD3P84022 425 aaKnown RBP22.72■■□□□ 1.23
TMEM53-205ENST00000372244 NONOQ15233 471 aaKnown RBP eCLIP22.72■■□□□ 1.23
TMEM53-205ENST00000372244 RABEP1Q15276 862 aa22.72■■□□□ 1.23
TMEM53-205ENST00000372244 Q4G0T1 1027 aa22.72■■□□□ 1.23
TMEM53-205ENST00000372244 MOXD1Q6UVY6 613 aa22.72■■□□□ 1.23
TMEM53-205ENST00000372244 UIMC1Q96RL1 719 aa22.72■■□□□ 1.23
TMEM53-205ENST00000372244 LLPHQ9BRT6 129 aaKnown RBP22.72■■□□□ 1.23
TMEM53-205ENST00000372244 AZI2Q9H6S1 392 aa22.72■■□□□ 1.23
TMEM53-205ENST00000372244 TRIP12Q14669 1992 aaPredicted RBP22.71■■□□□ 1.23
TMEM53-205ENST00000372244 MSH4O15457 936 aa22.71■■□□□ 1.23
TMEM53-205ENST00000372244 PARNO95453 639 aaKnown RBP22.71■■□□□ 1.23
TMEM53-205ENST00000372244 ZNF746Q6NUN9 644 aaPredicted RBP22.71■■□□□ 1.23
TMEM53-205ENST00000372244 LMBR1Q8WVP7 490 aa22.71■■□□□ 1.23
TMEM53-205ENST00000372244 UPF2Q9HAU5 1272 aaKnown RBP22.71■■□□□ 1.23
TMEM53-205ENST00000372244 SH2B1Q9NRF2 756 aaPredicted RBP22.71■■□□□ 1.23
TMEM53-205ENST00000372244 INF2Q27J81 1249 aa22.7■■□□□ 1.22
TMEM53-205ENST00000372244 ZNF618Q5T7W0 954 aa22.7■■□□□ 1.22
TMEM53-205ENST00000372244 LRRC8DQ7L1W4 858 aa22.7■■□□□ 1.22
TMEM53-205ENST00000372244 OTOP2Q7RTS6 562 aa22.7■■□□□ 1.22
TMEM53-205ENST00000372244 DEFB128Q7Z7B8 93 aa22.7■■□□□ 1.22
TMEM53-205ENST00000372244 RIT2Q99578 217 aa22.7■■□□□ 1.22
TMEM53-205ENST00000372244 CXXC1Q9P0U4 656 aaPredicted RBP22.7■■□□□ 1.22
TMEM53-205ENST00000372244 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.69■■□□□ 1.22
TMEM53-205ENST00000372244 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.69■■□□□ 1.22
TMEM53-205ENST00000372244 MBLAC1A4D2B0 266 aaPredicted RBP22.69■■□□□ 1.22
TMEM53-205ENST00000372244 DDX39AO00148 427 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms