RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 TMED2Q15363 201 aa17.33■□□□□ 0.36
CLSTN1-201ENST00000361311 VCPKMTQ9H867 229 aa17.33■□□□□ 0.36
CLSTN1-201ENST00000361311 ERCC6L2Q5T890 1561 aa17.33■□□□□ 0.36
CLSTN1-201ENST00000361311 SNX1Q13596 522 aa17.33■□□□□ 0.36
CLSTN1-201ENST00000361311 BBOF1Q8ND07 529 aa17.33■□□□□ 0.36
CLSTN1-201ENST00000361311 MAP3K14Q99558 947 aa17.33■□□□□ 0.36
CLSTN1-201ENST00000361311 NOC2LQ9Y3T9 749 aaKnown RBP17.33■□□□□ 0.36
CLSTN1-201ENST00000361311 DUSP10Q9Y6W6 482 aa17.33■□□□□ 0.36
CLSTN1-201ENST00000361311 ZCCHC11Q5TAX3 1644 aaKnown RBP17.33■□□□□ 0.36
CLSTN1-201ENST00000361311 MAP3K15Q6ZN16 1313 aa17.33■□□□□ 0.36
CLSTN1-201ENST00000361311 MAPK13O15264 365 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 RNASELQ05823 741 aaKnown RBP17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 PDXDC1Q6P996 788 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 SLITRK6Q9H5Y7 841 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 GCNT4Q9P109 453 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 GGT7Q9UJ14 662 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 CHRNDQ07001 517 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 EZH2Q15910 746 aaKnown RBP17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 RNF168Q8IYW5 571 aaPredicted RBP17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 AGXT2Q9BYV1 514 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 EHD4Q9H223 541 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 TXNDC16Q9P2K2 825 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 STK24Q9Y6E0 443 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 TCHHQ07283 1943 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 FCER1AP12319 257 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 BYSLQ13895 437 aaKnown RBP17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 LRRC14Q15048 493 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 SGO2Q562F6 1265 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 WDR44Q5JSH3 913 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 XPO6Q96QU8 1125 aaKnown RBP17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 DNAJC17Q9NVM6 304 aaKnown RBP17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 FOXO4P98177 505 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 PFKFB3Q16875 520 aaPredicted RBP17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 BTG4Q9NY30 223 aa17.32■□□□□ 0.36
CLSTN1-201ENST00000361311 NRXN1Q9ULB1 1477 aa17.31■□□□□ 0.36
CLSTN1-201ENST00000361311 SETD1BQ9UPS6 1966 aaKnown RBP17.31■□□□□ 0.36
CLSTN1-201ENST00000361311 OSBPL1AQ9BXW6 950 aa17.31■□□□□ 0.36
CLSTN1-201ENST00000361311 EDEM3Q9BZQ6 932 aa17.31■□□□□ 0.36
CLSTN1-201ENST00000361311 NOD2Q9HC29 1040 aa17.31■□□□□ 0.36
CLSTN1-201ENST00000361311 PODXLO00592 558 aa17.31■□□□□ 0.36
CLSTN1-201ENST00000361311 RAD51CO43502 376 aa17.31■□□□□ 0.36
CLSTN1-201ENST00000361311 LRRN2O75325 713 aa17.31■□□□□ 0.36
CLSTN1-201ENST00000361311 NCAPD2Q15021 1401 aa17.31■□□□□ 0.36
CLSTN1-201ENST00000361311 CCT8L1PA6NM43 557 aa17.31■□□□□ 0.36
CLSTN1-201ENST00000361311 SCP2P22307 547 aa17.31■□□□□ 0.36
CLSTN1-201ENST00000361311 MSH2P43246 934 aa17.31■□□□□ 0.36
CLSTN1-201ENST00000361311 TXNRD1Q16881 649 aa17.31■□□□□ 0.36
CLSTN1-201ENST00000361311 NSMCE1Q8WV22 266 aa17.31■□□□□ 0.36
CLSTN1-201ENST00000361311 FRMPD2Q68DX3 1309 aaPredicted RBP17.31■□□□□ 0.36
CLSTN1-201ENST00000361311 ADGRB1O14514 1584 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 SEMA3FQ13275 785 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 PABPC4Q13310 644 aaKnown RBP eCLIP17.3■□□□□ 0.366e-6■■■■■ 28.1
CLSTN1-201ENST00000361311 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 KAZALD1Q96I82 304 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 PSTPIP2Q9H939 334 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 ANAPC5Q9UJX4 755 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 USP31Q70CQ4 1352 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 GSG1L2A8MUP6 293 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 RAD23BP54727 409 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 CDC37Q16543 378 aaPredicted RBP17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 CDKAL1Q5VV42 579 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 TPTE2Q6XPS3 522 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 ZC3H18Q86VM9 953 aaKnown RBP17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 TPH2Q8IWU9 490 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 DDX17Q92841 729 aaKnown RBP17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 PNMA2Q9UL42 364 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 CAMSAP1Q5T5Y3 1602 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 CTAGE3PQ8IX95 158 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 PALM2Q8IXS6 379 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 PROM2Q8N271 834 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 FERMT1Q9BQL6 677 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 PKD2L1Q9P0L9 805 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 STOML1Q9UBI4 398 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 PPP1R9AQ9ULJ8 1098 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 SSU72P8A0A1W2PR75 194 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 RASSF10A6NK89 507 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 MAP3K7O43318 606 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 CHN1P15882 459 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 BRD2P25440 801 aaKnown RBP17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 RFX5P48382 616 aaPredicted RBP17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 KLK7P49862 253 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 PRR16Q569H4 304 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 LGSNQ5TDP6 509 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 AGBL2Q5U5Z8 902 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 DDX42Q86XP3 938 aaKnown RBP eCLIP17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 PPM1KQ8N3J5 372 aa17.3■□□□□ 0.36
CLSTN1-201ENST00000361311 PVALEFA0A1B0GWK0 134 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 CLIC2O15247 247 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 ATP5HO75947 161 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 HOXA7P31268 230 aaPredicted RBP17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 CPS1P31327 1500 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 PHBP35232 272 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 COG7P83436 770 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 PDS5AQ29RF7 1337 aaKnown RBP17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 FAM186BQ8IYM0 893 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 GUF1Q8N442 669 aaKnown RBP17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 MSL3Q8N5Y2 521 aaKnown RBP17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 HOOK2Q96ED9 719 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 FNBP1Q96RU3 617 aa17.29■□□□□ 0.36
CLSTN1-201ENST00000361311 DNAJC7Q99615 494 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms