RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 MARSP56192 900 aaKnown RBP20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 CCDC40Q4G0X9 1142 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 SAMD1Q6SPF0 538 aaPredicted RBP20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 ZC3H3Q8IXZ2 948 aaKnown RBP20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 HSD17B14Q9BPX1 270 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 TBC1D7Q9P0N9 293 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 CNOT7Q9UIV1 285 aaKnown RBP20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 RASSF10A6NK89 507 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 EML1O00423 815 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 GAS7O60861 476 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 FDX1P10109 184 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 GAP43P17677 238 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 CYLC1P35663 651 aaPredicted RBP20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 MAP3K9P80192 1104 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 TUBB2AQ13885 445 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 ARHGAP27Q6ZUM4 889 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 NIPA1Q7RTP0 329 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 CCDC170Q8IYT3 715 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 ACRBPQ8NEB7 543 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 MNS1Q8NEH6 495 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 SCFD1Q8WVM8 642 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 CHP1Q99653 195 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 REEP2Q9BRK0 252 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 TUBB2BQ9BVA1 445 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 TEKT3Q9BXF9 490 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 EDEM3Q9BZQ6 932 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 KCTD10Q9H3F6 313 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 ZHX3Q9H4I2 956 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 HACL1Q9UJ83 578 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 SIK3Q9Y2K2 1263 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 ZNF536O15090 1300 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 RPTORQ8N122 1335 aa20.25■□□□□ 0.83
PDLIM7-203ENST00000359895 FANCGO15287 622 aa20.24■□□□□ 0.83
PDLIM7-203ENST00000359895 TBCAO75347 108 aaKnown RBP20.24■□□□□ 0.83
PDLIM7-203ENST00000359895 BCRP11274 1271 aa20.24■□□□□ 0.83
PDLIM7-203ENST00000359895 KRT83P78385 493 aa20.24■□□□□ 0.83
PDLIM7-203ENST00000359895 CACNB1Q02641 598 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-203ENST00000359895 CYP4A11Q02928 519 aa20.24■□□□□ 0.83
PDLIM7-203ENST00000359895 WDR59Q6PJI9 974 aa20.24■□□□□ 0.83
PDLIM7-203ENST00000359895 AGBL1Q96MI9 1066 aa20.24■□□□□ 0.83
PDLIM7-203ENST00000359895 RIT2Q99578 217 aa20.24■□□□□ 0.83
PDLIM7-203ENST00000359895 MXRA8Q9BRK3 442 aa20.24■□□□□ 0.83
PDLIM7-203ENST00000359895 ZNF577Q9BSK1 485 aa20.24■□□□□ 0.83
PDLIM7-203ENST00000359895 AGPAT5Q9NUQ2 364 aa20.24■□□□□ 0.83
PDLIM7-203ENST00000359895 MYH11P35749 1972 aa20.24■□□□□ 0.83
PDLIM7-203ENST00000359895 EGFRP00533 1210 aa20.23■□□□□ 0.83
PDLIM7-203ENST00000359895 KLK7P49862 253 aa20.23■□□□□ 0.83
PDLIM7-203ENST00000359895 EPHA7Q15375 998 aa20.23■□□□□ 0.83
PDLIM7-203ENST00000359895 ZNF662Q6ZS27 426 aa20.23■□□□□ 0.83
PDLIM7-203ENST00000359895 NEK9Q8TD19 979 aa20.23■□□□□ 0.83
PDLIM7-203ENST00000359895 FGFBP2Q9BYJ0 223 aa20.23■□□□□ 0.83
PDLIM7-203ENST00000359895 BHMT2Q9H2M3 363 aa20.23■□□□□ 0.83
PDLIM7-203ENST00000359895 FAM184BQ9ULE4 1060 aa20.23■□□□□ 0.83
PDLIM7-203ENST00000359895 GJA3Q9Y6H8 435 aa20.23■□□□□ 0.83
PDLIM7-203ENST00000359895 DICER1Q9UPY3 1922 aaKnown RBP20.22■□□□□ 0.83
PDLIM7-203ENST00000359895 HNRNPH3P31942 346 aaKnown RBP20.22■□□□□ 0.83
PDLIM7-203ENST00000359895 RAD51AP2Q09MP3 1159 aa20.22■□□□□ 0.83
PDLIM7-203ENST00000359895 EPM2AIP1Q7L775 607 aaPredicted RBP20.22■□□□□ 0.83
PDLIM7-203ENST00000359895 SAMD7Q7Z3H4 446 aa20.22■□□□□ 0.83
PDLIM7-203ENST00000359895 SFR1Q86XK3 245 aa20.22■□□□□ 0.83
PDLIM7-203ENST00000359895 NELFCDQ8IXH7 590 aa20.22■□□□□ 0.83
PDLIM7-203ENST00000359895 CLEC4DQ8WXI8 215 aa20.22■□□□□ 0.83
PDLIM7-203ENST00000359895 DYDC2Q96IM9 177 aa20.22■□□□□ 0.83
PDLIM7-203ENST00000359895 HAUS4Q9H6D7 363 aa20.22■□□□□ 0.83
PDLIM7-203ENST00000359895 AS3MTQ9HBK9 375 aa20.22■□□□□ 0.83
PDLIM7-203ENST00000359895 SLC38A10Q9HBR0 1119 aa20.22■□□□□ 0.83
PDLIM7-203ENST00000359895 RGL1Q9NZL6 768 aa20.22■□□□□ 0.83
PDLIM7-203ENST00000359895 TRAF3IP3Q9Y228 551 aa20.22■□□□□ 0.83
PDLIM7-203ENST00000359895 CTDP1Q9Y5B0 961 aaPredicted RBP20.22■□□□□ 0.83
PDLIM7-203ENST00000359895 MRFAP1Q9Y605 127 aa20.22■□□□□ 0.83
PDLIM7-203ENST00000359895 CETN3O15182 167 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 CALUO43852 315 aaPredicted RBP20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 SLITRK3O94933 977 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 IPO7O95373 1038 aaKnown RBP20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 UBXN2AP68543 259 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 BMT2Q1RMZ1 405 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 TBC1D10BQ4KMP7 808 aaPredicted RBP20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 APOBEC3FQ8IUX4 373 aaKnown RBP20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 NACC1Q96RE7 527 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 TANGO6Q9C0B7 1094 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 KCND2Q9NZV8 630 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 PPP1R9AQ9ULJ8 1098 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 EIF3CLB5ME19 914 aaKnown RBP20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 PDXKO00764 312 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 ZBED4O75132 1171 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 ARHGAP25P42331 645 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 RASSF7Q02833 373 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 CTTNQ14247 550 aaKnown RBP20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 NAA30Q147X3 362 aaPredicted RBP20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 KNOP1Q1ED39 458 aaKnown RBP20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 ZNF569Q5MCW4 686 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 RINT1Q6NUQ1 792 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 B3GNT9Q6UX72 402 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 TPH2Q8IWU9 490 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 NEK11Q8NG66 645 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 EIF3CQ99613 913 aaKnown RBP20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 MMRN2Q9H8L6 949 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 OLFML3Q9NRN5 406 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 ZNF112Q9UJU3 913 aa20.21■□□□□ 0.83
PDLIM7-203ENST00000359895 SCAF8Q9UPN6 1271 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms