RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 KRT76Q01546 638 aa28.58■■■□□ 2.17
SSBP3-202ENST00000357475 PKN2Q16513 984 aaKnown RBP28.58■■■□□ 2.17
SSBP3-202ENST00000357475 GPR20Q99678 358 aa28.58■■■□□ 2.17
SSBP3-202ENST00000357475 MMTAG2Q9BU76 263 aaKnown RBP28.58■■■□□ 2.17
SSBP3-202ENST00000357475 LRWD1Q9UFC0 647 aa28.58■■■□□ 2.17
SSBP3-202ENST00000357475 MYADML2A6NDP7 307 aa28.57■■■□□ 2.16
SSBP3-202ENST00000357475 NKRFO15226 690 aaKnown RBP eCLIP28.57■■■□□ 2.16
SSBP3-202ENST00000357475 PRPF40AO75400 957 aaKnown RBP28.57■■■□□ 2.16
SSBP3-202ENST00000357475 LAMC2Q13753 1193 aa28.57■■■□□ 2.16
SSBP3-202ENST00000357475 ZNF746Q6NUN9 644 aaPredicted RBP28.57■■■□□ 2.16
SSBP3-202ENST00000357475 EMID1Q96A84 441 aaPredicted RBP28.57■■■□□ 2.16
SSBP3-202ENST00000357475 DDX20Q9UHI6 824 aaKnown RBP28.57■■■□□ 2.16
SSBP3-202ENST00000357475 SYNRGQ9UMZ2 1314 aa28.56■■■□□ 2.16
SSBP3-202ENST00000357475 CTAGE5O15320 804 aa28.56■■■□□ 2.16
SSBP3-202ENST00000357475 DUSP11O75319 330 aaKnown RBP28.56■■■□□ 2.16
SSBP3-202ENST00000357475 PGK1P00558 417 aa28.56■■■□□ 2.16
SSBP3-202ENST00000357475 LONP1P36776 959 aaKnown RBP28.56■■■□□ 2.16
SSBP3-202ENST00000357475 PDIA5Q14554 519 aa28.56■■■□□ 2.16
SSBP3-202ENST00000357475 MIER3Q7Z3K6 550 aa28.56■■■□□ 2.16
SSBP3-202ENST00000357475 SYMPKQ92797 1274 aaKnown RBP28.56■■■□□ 2.16
SSBP3-202ENST00000357475 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.56■■■□□ 2.164e-6■■■□□ 16.4
SSBP3-202ENST00000357475 DISC1Q9NRI5 854 aa28.56■■■□□ 2.16
SSBP3-202ENST00000357475 ADALQ6DHV7 355 aa28.55■■■□□ 2.16
SSBP3-202ENST00000357475 RGL1Q9NZL6 768 aa28.55■■■□□ 2.16
SSBP3-202ENST00000357475 SAMM50Q9Y512 469 aa28.55■■■□□ 2.16
SSBP3-202ENST00000357475 WDR64B1ANS9 1081 aa28.54■■■□□ 2.16
SSBP3-202ENST00000357475 RARBP10826 455 aa28.54■■■□□ 2.16
SSBP3-202ENST00000357475 BEX3Q00994 111 aa28.54■■■□□ 2.16
SSBP3-202ENST00000357475 UGCGQ16739 394 aa28.54■■■□□ 2.16
SSBP3-202ENST00000357475 LHX8Q68G74 356 aa28.54■■■□□ 2.16
SSBP3-202ENST00000357475 ABHD15Q6UXT9 468 aa28.54■■■□□ 2.16
SSBP3-202ENST00000357475 ZNF579Q8NAF0 562 aaKnown RBP28.54■■■□□ 2.16
SSBP3-202ENST00000357475 ZNF333Q96JL9 665 aa28.54■■■□□ 2.16
SSBP3-202ENST00000357475 PCYT2Q99447 389 aa28.54■■■□□ 2.16
SSBP3-202ENST00000357475 EIF2AK1Q9BQI3 630 aaKnown RBP28.54■■■□□ 2.16
SSBP3-202ENST00000357475 NOP56O00567 594 aaKnown RBP28.53■■■□□ 2.16
SSBP3-202ENST00000357475 ATG7O95352 703 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 CCL5P13501 91 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 CYP4A11Q02928 519 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 ECM1Q16610 540 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 BANK1Q8NDB2 785 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 PPTC7Q8NI37 304 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 MCOLN1Q9GZU1 580 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 LMBRD1Q9NUN5 540 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 WRAP73Q9P2S5 460 aaPredicted RBP28.53■■■□□ 2.16
SSBP3-202ENST00000357475 TCEAL9Q9UHQ7 104 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 Q9Y3F1 56 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 MED24O75448 989 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 MMP3P08254 477 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 SUPT20HL2P0C7V6 817 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 TCF7P36402 384 aaPredicted RBP28.53■■■□□ 2.16
SSBP3-202ENST00000357475 RESP18Q5W5W9 173 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 TRIM50Q86XT4 487 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 CCDC60Q8IWA6 550 aaPredicted RBP28.53■■■□□ 2.16
SSBP3-202ENST00000357475 SMAP1Q8IYB5 467 aaPredicted RBP28.53■■■□□ 2.16
SSBP3-202ENST00000357475 DYDC2Q96IM9 177 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 AK8Q96MA6 479 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 RAB34Q9BZG1 259 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 UPF3AQ9H1J1 476 aaKnown RBP28.53■■■□□ 2.16
SSBP3-202ENST00000357475 GOLPH3LQ9H4A5 285 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 XPNPEP3Q9NQH7 507 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 PCDHA10Q9Y5I2 948 aa28.53■■■□□ 2.16
SSBP3-202ENST00000357475 MYH9P35579 1960 aaKnown RBP28.53■■■□□ 2.16
SSBP3-202ENST00000357475 A0A087X0B3 334 aa28.52■■■□□ 2.16
SSBP3-202ENST00000357475 ADAMTS4O75173 837 aa28.52■■■□□ 2.16
SSBP3-202ENST00000357475 SPATA31C1P0DKV0 1188 aa28.52■■■□□ 2.16
SSBP3-202ENST00000357475 JAK3P52333 1124 aa28.52■■■□□ 2.16
SSBP3-202ENST00000357475 GJA9P57773 515 aa28.52■■■□□ 2.16
SSBP3-202ENST00000357475 CTTNQ14247 550 aaKnown RBP28.52■■■□□ 2.16
SSBP3-202ENST00000357475 EPHA7Q15375 998 aa28.52■■■□□ 2.16
SSBP3-202ENST00000357475 CSPP1Q1MSJ5 1256 aa28.52■■■□□ 2.16
SSBP3-202ENST00000357475 SNX29Q8TEQ0 813 aa28.52■■■□□ 2.16
SSBP3-202ENST00000357475 SEPT1Q8WYJ6 367 aa28.52■■■□□ 2.16
SSBP3-202ENST00000357475 ARMC5Q96C12 935 aa28.52■■■□□ 2.16
SSBP3-202ENST00000357475 AP5M1Q9H0R1 490 aa28.52■■■□□ 2.16
SSBP3-202ENST00000357475 PAK6Q9NQU5 681 aaPredicted RBP28.52■■■□□ 2.16
SSBP3-202ENST00000357475 A0A087WWV3 80 aa28.51■■■□□ 2.15
SSBP3-202ENST00000357475 A0A1B0GVL5 298 aa28.51■■■□□ 2.15
SSBP3-202ENST00000357475 A6NJR5 290 aa28.51■■■□□ 2.15
SSBP3-202ENST00000357475 C6orf222P0C671 652 aaPredicted RBP28.51■■■□□ 2.15
SSBP3-202ENST00000357475 SFNP31947 248 aa28.51■■■□□ 2.15
SSBP3-202ENST00000357475 KARSQ15046 597 aaKnown RBP28.51■■■□□ 2.15
SSBP3-202ENST00000357475 ZRSR1Q15695 479 aaKnown RBP28.51■■■□□ 2.15
SSBP3-202ENST00000357475 UTP14CQ5TAP6 766 aaKnown RBP28.51■■■□□ 2.15
SSBP3-202ENST00000357475 SWSAP1Q6NVH7 229 aa28.51■■■□□ 2.15
SSBP3-202ENST00000357475 CABP7Q86V35 215 aa28.51■■■□□ 2.15
SSBP3-202ENST00000357475 LRRC15Q8TF66 581 aa28.51■■■□□ 2.15
SSBP3-202ENST00000357475 PLIN2Q99541 437 aa28.51■■■□□ 2.15
SSBP3-202ENST00000357475 HSD17B14Q9BPX1 270 aa28.51■■■□□ 2.15
SSBP3-202ENST00000357475 RNF208Q9H0X6 261 aa28.51■■■□□ 2.15
SSBP3-202ENST00000357475 IGKV6D-21A0A0A0MT36 114 aa28.5■■■□□ 2.15
SSBP3-202ENST00000357475 POTEB3A0JP26 581 aa28.5■■■□□ 2.15
SSBP3-202ENST00000357475 SLITRK3O94933 977 aa28.5■■■□□ 2.15
SSBP3-202ENST00000357475 MCM4P33991 863 aa28.5■■■□□ 2.15
SSBP3-202ENST00000357475 FSCN1Q16658 493 aaKnown RBP28.5■■■□□ 2.15
SSBP3-202ENST00000357475 MIS18BP1Q6P0N0 1132 aa28.5■■■□□ 2.15
SSBP3-202ENST00000357475 POTEBQ6S5H4 581 aa28.5■■■□□ 2.15
SSBP3-202ENST00000357475 CATSPER3Q86XQ3 398 aa28.5■■■□□ 2.15
SSBP3-202ENST00000357475 PNMA5Q96PV4 448 aa28.5■■■□□ 2.15
SSBP3-202ENST00000357475 PANK2Q9BZ23 570 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms