RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 DDX42Q86XP3 938 aaKnown RBP eCLIP17.82■□□□□ 0.44
UPK3B-202ENST00000334348 UBLCP1Q8WVY7 318 aaPredicted RBP17.82■□□□□ 0.44
UPK3B-202ENST00000334348 MAGOHBQ96A72 148 aaKnown RBP17.82■□□□□ 0.44
UPK3B-202ENST00000334348 CNOT10Q9H9A5 744 aaKnown RBP17.82■□□□□ 0.44
UPK3B-202ENST00000334348 RIC8AQ9NPQ8 531 aa17.82■□□□□ 0.44
UPK3B-202ENST00000334348 A0A087X0T9 212 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 PHF20L1A8MW92 1017 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 KIF4AO95239 1232 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 FAM228BP0C875 321 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 CYP19A1P11511 503 aaPredicted RBP17.81■□□□□ 0.44
UPK3B-202ENST00000334348 TECP42680 631 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 USP11P51784 963 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 CLNS1AP54105 237 aaKnown RBP17.81■□□□□ 0.44
UPK3B-202ENST00000334348 ELF3P78545 371 aaPredicted RBP17.81■□□□□ 0.44
UPK3B-202ENST00000334348 SATB1Q01826 763 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 PROM2Q8N271 834 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 CENPTQ96BT3 561 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 TSG101Q99816 390 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 OPLAHO14841 1288 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 SART1O43290 800 aaKnown RBP17.81■□□□□ 0.44
UPK3B-202ENST00000334348 CCNT1O60563 726 aaKnown RBP17.81■□□□□ 0.44
UPK3B-202ENST00000334348 PPARDQ03181 441 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 GRM4Q14833 912 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 MSL1Q68DK7 614 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 HEATR3Q7Z4Q2 680 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 TBC1D22AQ8WUA7 517 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.81■□□□□ 0.44
UPK3B-202ENST00000334348 PACSIN1Q9BY11 444 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 BLOC1S4Q9NUP1 217 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 STK17AQ9UEE5 414 aa17.81■□□□□ 0.44
UPK3B-202ENST00000334348 BAZ2AQ9UIF9 1905 aaKnown RBP17.8■□□□□ 0.44
UPK3B-202ENST00000334348 F8W031 263 aaPredicted RBP17.8■□□□□ 0.44
UPK3B-202ENST00000334348 BACH1O14867 736 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 RTN2O75298 545 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 ATP6V1G2O95670 118 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 POLR2FP61218 127 aaKnown RBP17.8■□□□□ 0.44
UPK3B-202ENST00000334348 LETM2Q2VYF4 491 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 KRT25Q7Z3Z0 450 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 DGKHQ86XP1 1220 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 DZIP3Q86Y13 1208 aaKnown RBP17.8■□□□□ 0.44
UPK3B-202ENST00000334348 FMNL3Q8IVF7 1028 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 ZNF384Q8TF68 577 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 CHMP6Q96FZ7 201 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 LSM14BQ9BX40 385 aaKnown RBP17.8■□□□□ 0.44
UPK3B-202ENST00000334348 DCP1AQ9NPI6 582 aaPredicted RBP17.8■□□□□ 0.44
UPK3B-202ENST00000334348 AIPL1Q9NZN9 384 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 ZBTB1Q9Y2K1 713 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 ITGB4P16144 1822 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 CACNA1SQ13698 1873 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 CCT8L1PA6NM43 557 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 CCDC188H7C350 402 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 CEP104O60308 925 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 ATP2C2O75185 946 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 FLT3P36888 993 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 SLC8A3P57103 927 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 CCDC152Q4G0S7 254 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 ERMARDQ5T6L9 678 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 TMC3Q7Z5M5 1100 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 PNMA1Q8ND90 353 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 PSMD1Q99460 953 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 NOD2Q9HC29 1040 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 ADAMTS1Q9UHI8 967 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 MAD2L2Q9UI95 211 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 COL4A3BPQ9Y5P4 624 aa17.8■□□□□ 0.44
UPK3B-202ENST00000334348 DCDC2CA8MYV0 355 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 PGRMC1O00264 195 aaKnown RBP17.79■□□□□ 0.44
UPK3B-202ENST00000334348 KLHL30Q0D2K2 578 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 PSMD2Q13200 908 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 GRB10Q13322 594 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 SLC35G1Q2M3R5 365 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 C10orf76Q5T2E6 689 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 SUSD4Q5VX71 490 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 FAM196AQ6ZSG2 479 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 CUL5Q93034 780 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 TLCD1Q96CP7 247 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 PPP1R12AO14974 1030 aaPredicted RBP17.79■□□□□ 0.44
UPK3B-202ENST00000334348 GSTA1P08263 222 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 PAX7P23759 505 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 GYG1P46976 350 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 FKBP3Q00688 224 aaKnown RBP17.79■□□□□ 0.44
UPK3B-202ENST00000334348 NONOQ15233 471 aaKnown RBP eCLIP17.79■□□□□ 0.44
UPK3B-202ENST00000334348 IFI16Q16666 785 aaKnown RBP17.79■□□□□ 0.44
UPK3B-202ENST00000334348 KRT71Q3SY84 523 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 SBK1Q52WX2 424 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 CCDC197Q8NCU1 140 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 HOOK2Q96ED9 719 aa17.79■□□□□ 0.44
UPK3B-202ENST00000334348 XPO6Q96QU8 1125 aaKnown RBP17.79■□□□□ 0.44
UPK3B-202ENST00000334348 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.79■□□□□ 0.44
UPK3B-202ENST00000334348 COL1A1P02452 1464 aaPredicted RBP17.78■□□□□ 0.44
UPK3B-202ENST00000334348 GBP2P32456 591 aaPredicted RBP17.78■□□□□ 0.44
UPK3B-202ENST00000334348 CRELD2Q6UXH1 353 aaPredicted RBP17.78■□□□□ 0.44
UPK3B-202ENST00000334348 DYMQ7RTS9 669 aa17.78■□□□□ 0.44
UPK3B-202ENST00000334348 MAB21L3Q8N8X9 362 aa17.78■□□□□ 0.44
UPK3B-202ENST00000334348 SEC14L1Q92503 715 aa17.78■□□□□ 0.44
UPK3B-202ENST00000334348 LARP4BQ92615 738 aaKnown RBP17.78■□□□□ 0.44
UPK3B-202ENST00000334348 CRNKL1Q9BZJ0 848 aaKnown RBP17.78■□□□□ 0.44
UPK3B-202ENST00000334348 FAM129AQ9BZQ8 928 aa17.78■□□□□ 0.44
UPK3B-202ENST00000334348 ZMYND12Q9H0C1 365 aa17.78■□□□□ 0.44
UPK3B-202ENST00000334348 SLITRK6Q9H5Y7 841 aa17.78■□□□□ 0.44
UPK3B-202ENST00000334348 ATP8A2Q9NTI2 1148 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms