RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 MFSD14AQ96MC6 490 aa15.96■□□□□ 0.14
DDX39A-201ENST00000242776 PIGSQ96S52 555 aa15.96■□□□□ 0.14
DDX39A-201ENST00000242776 LOXHD1Q8IVV2 1947 aa15.96■□□□□ 0.14
DDX39A-201ENST00000242776 ZBTB5O15062 677 aa15.95■□□□□ 0.14
DDX39A-201ENST00000242776 BMPR1AP36894 532 aa15.95■□□□□ 0.14
DDX39A-201ENST00000242776 COL19A1Q14993 1142 aa15.95■□□□□ 0.14
DDX39A-201ENST00000242776 SMAD2Q15796 467 aaKnown RBP15.95■□□□□ 0.14
DDX39A-201ENST00000242776 TTC22Q5TAA0 569 aa15.95■□□□□ 0.14
DDX39A-201ENST00000242776 RUFY4Q6ZNE9 571 aa15.95■□□□□ 0.14
DDX39A-201ENST00000242776 LMBR1Q8WVP7 490 aa15.95■□□□□ 0.14
DDX39A-201ENST00000242776 C11orf84Q9BUA3 381 aaPredicted RBP15.95■□□□□ 0.14
DDX39A-201ENST00000242776 MAD2L2Q9UI95 211 aa15.95■□□□□ 0.14
DDX39A-201ENST00000242776 ADGRA3Q8IWK6 1321 aa15.95■□□□□ 0.14
DDX39A-201ENST00000242776 CHRNA1P02708 482 aa15.94■□□□□ 0.14
DDX39A-201ENST00000242776 TGFB3P10600 412 aa15.94■□□□□ 0.14
DDX39A-201ENST00000242776 GNAT1P11488 350 aa15.94■□□□□ 0.14
DDX39A-201ENST00000242776 HOXC8P31273 242 aa15.94■□□□□ 0.14
DDX39A-201ENST00000242776 NDUFV1P49821 464 aa15.94■□□□□ 0.14
DDX39A-201ENST00000242776 BTG3Q14201 252 aaPredicted RBP15.94■□□□□ 0.14
DDX39A-201ENST00000242776 IER5LQ5T953 404 aa15.94■□□□□ 0.14
DDX39A-201ENST00000242776 SKAP1Q86WV1 359 aa15.94■□□□□ 0.14
DDX39A-201ENST00000242776 APBB2Q92870 758 aa15.94■□□□□ 0.14
DDX39A-201ENST00000242776 GPR20Q99678 358 aa15.94■□□□□ 0.14
DDX39A-201ENST00000242776 USP26Q9BXU7 913 aa15.94■□□□□ 0.14
DDX39A-201ENST00000242776 DIAPH3Q9NSV4 1193 aa15.94■□□□□ 0.14
DDX39A-201ENST00000242776 CD207Q9UJ71 328 aa15.94■□□□□ 0.14
DDX39A-201ENST00000242776 COL4A6Q14031 1691 aa15.94■□□□□ 0.14
DDX39A-201ENST00000242776 LINC00271P0C7V0 271 aa15.93■□□□□ 0.14
DDX39A-201ENST00000242776 MARK3P27448 753 aa15.93■□□□□ 0.14
DDX39A-201ENST00000242776 MRPS9P82933 396 aaKnown RBP15.93■□□□□ 0.14
DDX39A-201ENST00000242776 SEMA3FQ13275 785 aa15.93■□□□□ 0.14
DDX39A-201ENST00000242776 SMAD4Q13485 552 aaKnown RBP15.93■□□□□ 0.14
DDX39A-201ENST00000242776 IMMTQ16891 758 aaKnown RBP15.93■□□□□ 0.14
DDX39A-201ENST00000242776 SLC35G1Q2M3R5 365 aa15.93■□□□□ 0.14
DDX39A-201ENST00000242776 CTC1Q2NKJ3 1217 aa15.93■□□□□ 0.14
DDX39A-201ENST00000242776 PAN2Q504Q3 1202 aaKnown RBP15.93■□□□□ 0.14
DDX39A-201ENST00000242776 CYB5R4Q7L1T6 521 aa15.93■□□□□ 0.14
DDX39A-201ENST00000242776 RBM23Q86U06 439 aaKnown RBP15.93■□□□□ 0.14
DDX39A-201ENST00000242776 PRSS33Q8NF86 280 aa15.93■□□□□ 0.14
DDX39A-201ENST00000242776 POP1Q99575 1024 aaKnown RBP15.93■□□□□ 0.14
DDX39A-201ENST00000242776 C5orf67F2Z3F1 127 aa15.92■□□□□ 0.14
DDX39A-201ENST00000242776 NCK2O43639 380 aa15.92■□□□□ 0.14
DDX39A-201ENST00000242776 CAND2O75155 1236 aa15.92■□□□□ 0.14
DDX39A-201ENST00000242776 RB1P06400 928 aa15.92■□□□□ 0.14
DDX39A-201ENST00000242776 GHRHRQ02643 423 aa15.92■□□□□ 0.14
DDX39A-201ENST00000242776 GNPTABQ3T906 1256 aa15.92■□□□□ 0.14
DDX39A-201ENST00000242776 HERC4Q5GLZ8 1057 aaPredicted RBP15.92■□□□□ 0.14
DDX39A-201ENST00000242776 METTL7BQ6UX53 244 aa15.92■□□□□ 0.14
DDX39A-201ENST00000242776 ADGRD2Q7Z7M1 963 aa15.92■□□□□ 0.14
DDX39A-201ENST00000242776 PBXIP1Q96AQ6 731 aa15.92■□□□□ 0.14
DDX39A-201ENST00000242776 ZBTB10Q96DT7 871 aa15.92■□□□□ 0.14
DDX39A-201ENST00000242776 KRT23Q9C075 422 aa15.92■□□□□ 0.14
DDX39A-201ENST00000242776 KCNH6Q9H252 994 aa15.92■□□□□ 0.14
DDX39A-201ENST00000242776 ZNF215Q9UL58 517 aaPredicted RBP15.92■□□□□ 0.14
DDX39A-201ENST00000242776 TTC3P53804 2025 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 ENPP3O14638 875 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 DNAJB1P25685 340 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 IGBP1P78318 339 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 NEDD9Q14511 834 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 LPIN1Q14693 890 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 FAM26DQ5JW98 314 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 DNAJB3Q8WWF6 145 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 EDAQ92838 391 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 MTMR8Q96EF0 704 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 LMAN2LQ9H0V9 348 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 FAM86C1Q9NVL1 165 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 MAP3K20Q9NYL2 800 aaKnown RBP15.91■□□□□ 0.14
DDX39A-201ENST00000242776 PKD2L1Q9P0L9 805 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 PCDHGC5Q9Y5F6 944 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 PLXNA4Q9HCM2 1894 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 TMEM221A6NGB7 291 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 SPATA31C2B4DYI2 1134 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 M0R296 226 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 PPFIA3O75145 1194 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 MMP1P03956 469 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 BMP2KLQ5H9B9 411 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 SENP2Q9HC62 589 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 PLAGL2Q9UPG8 496 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 RWDD3Q9Y3V2 267 aa15.91■□□□□ 0.14
DDX39A-201ENST00000242776 MRPL42Q9Y6G3 142 aaKnown RBP15.91■□□□□ 0.14
DDX39A-201ENST00000242776 PALM3A6NDB9 673 aaPredicted RBP15.9■□□□□ 0.14
DDX39A-201ENST00000242776 FIBPO43427 364 aa15.9■□□□□ 0.14
DDX39A-201ENST00000242776 GSPT1P15170 499 aaKnown RBP15.9■□□□□ 0.14
DDX39A-201ENST00000242776 NRIP1P48552 1158 aa15.9■□□□□ 0.14
DDX39A-201ENST00000242776 ADAM17P78536 824 aa15.9■□□□□ 0.14
DDX39A-201ENST00000242776 PPFIA1Q13136 1202 aa15.9■□□□□ 0.14
DDX39A-201ENST00000242776 ADAM15Q13444 863 aa15.9■□□□□ 0.14
DDX39A-201ENST00000242776 CAMK1Q14012 370 aa15.9■□□□□ 0.14
DDX39A-201ENST00000242776 SEC23AQ15436 765 aa15.9■□□□□ 0.14
DDX39A-201ENST00000242776 SNX27Q96L92 541 aa15.9■□□□□ 0.14
DDX39A-201ENST00000242776 CNNM2Q9H8M5 875 aa15.9■□□□□ 0.14
DDX39A-201ENST00000242776 BARX2Q9UMQ3 279 aaPredicted RBP15.9■□□□□ 0.14
DDX39A-201ENST00000242776 CDY2AQ9Y6F7 541 aa15.9■□□□□ 0.14
DDX39A-201ENST00000242776 KMT2EQ8IZD2 1858 aa15.89■□□□□ 0.13
DDX39A-201ENST00000242776 CYTH3O43739 400 aa15.89■□□□□ 0.13
DDX39A-201ENST00000242776 ITGB1P05556 798 aa15.89■□□□□ 0.13
DDX39A-201ENST00000242776 CD52P31358 61 aa15.89■□□□□ 0.13
DDX39A-201ENST00000242776 ICAM3P32942 547 aa15.89■□□□□ 0.13
DDX39A-201ENST00000242776 TCF7P36402 384 aaPredicted RBP15.89■□□□□ 0.13
DDX39A-201ENST00000242776 GATMP50440 423 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms