RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 PPP1R2P41236 205 aa19.41■□□□□ 0.7
CDKN1B-201ENST00000228872 PFKFB3Q16875 520 aaPredicted RBP19.41■□□□□ 0.7
CDKN1B-201ENST00000228872 ODF2Q5BJF6 829 aa19.41■□□□□ 0.7
CDKN1B-201ENST00000228872 MSL1Q68DK7 614 aa19.41■□□□□ 0.7
CDKN1B-201ENST00000228872 TRIM9Q9C026 710 aa19.41■□□□□ 0.7
CDKN1B-201ENST00000228872 PACSIN2Q9UNF0 486 aaPredicted RBP19.41■□□□□ 0.7
CDKN1B-201ENST00000228872 WTIPA6NIX2 430 aaPredicted RBP19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 DRD4P21917 467 aa19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 ASIC1P78348 528 aa19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 CCDC84Q86UT8 332 aaPredicted RBP19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 CEP120Q8N960 986 aa19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 LRP2BPQ9P2M1 347 aa19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 TMEM59LQ9UK28 342 aa19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 PHF20L1A8MW92 1017 aa19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 KIF3CO14782 793 aa19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 PPIP5K2O43314 1243 aa19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 ORC4O43929 436 aa19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 GYG1P46976 350 aa19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 CUL1Q13616 776 aa19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 NAB2Q15742 525 aa19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 MAN2A1Q16706 1144 aa19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 TDRD12Q587J7 1177 aaKnown RBP19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 BLIDQ8IZY5 108 aa19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 MAB21L3Q8N8X9 362 aa19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 NOVA2Q9UNW9 492 aaKnown RBP19.4■□□□□ 0.7
CDKN1B-201ENST00000228872 KLRG2A4D1S0 409 aaPredicted RBP19.39■□□□□ 0.7
CDKN1B-201ENST00000228872 IRX1P78414 480 aaPredicted RBP19.39■□□□□ 0.7
CDKN1B-201ENST00000228872 EHHADHQ08426 723 aa19.39■□□□□ 0.7
CDKN1B-201ENST00000228872 CPLX4Q7Z7G2 160 aa19.39■□□□□ 0.7
CDKN1B-201ENST00000228872 RASGRP4Q8TDF6 673 aa19.39■□□□□ 0.7
CDKN1B-201ENST00000228872 CUL5Q93034 780 aa19.39■□□□□ 0.7
CDKN1B-201ENST00000228872 HOOK2Q96ED9 719 aa19.39■□□□□ 0.7
CDKN1B-201ENST00000228872 RSRC1Q96IZ7 334 aaKnown RBP19.39■□□□□ 0.7
CDKN1B-201ENST00000228872 CUEDC2Q9H467 287 aa19.39■□□□□ 0.7
CDKN1B-201ENST00000228872 MAGEF1Q9HAY2 307 aa19.39■□□□□ 0.7
CDKN1B-201ENST00000228872 PLCG1P19174 1290 aa19.39■□□□□ 0.69
CDKN1B-201ENST00000228872 RCSD1Q6JBY9 416 aa19.39■□□□□ 0.69
CDKN1B-201ENST00000228872 KIAA0895Q8NCT3 520 aa19.39■□□□□ 0.69
CDKN1B-201ENST00000228872 CAMKK2Q96RR4 588 aa19.39■□□□□ 0.69
CDKN1B-201ENST00000228872 PCDHGC5Q9Y5F6 944 aa19.39■□□□□ 0.69
CDKN1B-201ENST00000228872 LRRC37AA6NMS7 1700 aa19.39■□□□□ 0.69
CDKN1B-201ENST00000228872 KLRC1P26715 233 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 CALML3P27482 149 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 HIBCHQ6NVY1 386 aaPredicted RBP19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 TBC1D31Q96DN5 1066 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 C7orf25Q9BPX7 421 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 NEUROG2Q9H2A3 272 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 BAIAP2L1Q9UHR4 511 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 COL1A1P02452 1464 aaPredicted RBP19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 DCDC2CA8MYV0 355 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 F8W031 263 aaPredicted RBP19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 C11orf91Q3C1V1 193 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 CENPPQ6IPU0 288 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 CACNA2D4Q7Z3S7 1137 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 DDX42Q86XP3 938 aaKnown RBP eCLIP19.38■□□□□ 0.696e-7■□□□□ 8.7
CDKN1B-201ENST00000228872 RPGRQ92834 1020 aaKnown RBP19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 HPS3Q969F9 1004 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 FBXL5Q9UKA1 691 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 FLT1P17948 1338 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 DUOX1Q9NRD9 1551 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 CYP2D7A0A087X1C5 515 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 MAGOHP61326 146 aaKnown RBP19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 COBLL1Q53SF7 1204 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 CAVIN4Q5BKX8 364 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 MAGOHBQ96A72 148 aaKnown RBP19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 STAMBPL1Q96FJ0 436 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.38■□□□□ 0.692e-7■■■■□ 22.9
CDKN1B-201ENST00000228872 ABCF2Q9UG63 623 aa19.38■□□□□ 0.69
CDKN1B-201ENST00000228872 CCT8L1PA6NM43 557 aa19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 BHMG1C9JSJ3 638 aaPredicted RBP19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 CALRP27797 417 aaKnown RBP19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 GRIK3Q13003 919 aa19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 PPP1R7Q15435 360 aa19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 ADGRA1Q86SQ6 560 aa19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 STAG2Q8N3U4 1231 aa19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 UBLCP1Q8WVY7 318 aaPredicted RBP19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 EDEM3Q9BZQ6 932 aa19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 EBF2Q9HAK2 575 aa19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 BUB1BO60566 1050 aaPredicted RBP19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 CYP7A1P22680 504 aa19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 HOXA10P31260 410 aaPredicted RBP19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 CCNHP51946 323 aaPredicted RBP19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 CNNM4Q6P4Q7 775 aa19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 CABP7Q86V35 215 aa19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 RBM17Q96I25 401 aaKnown RBP19.37■□□□□ 0.69
CDKN1B-201ENST00000228872 CACNA1SQ13698 1873 aa19.36■□□□□ 0.69
CDKN1B-201ENST00000228872 MTMR3Q13615 1198 aa19.36■□□□□ 0.69
CDKN1B-201ENST00000228872 ZKSCAN8Q15776 578 aaPredicted RBP19.36■□□□□ 0.69
CDKN1B-201ENST00000228872 SLC9C1Q4G0N8 1177 aa19.36■□□□□ 0.69
CDKN1B-201ENST00000228872 FAM84BQ96KN1 310 aaPredicted RBP19.36■□□□□ 0.69
CDKN1B-201ENST00000228872 LUC7LQ9NQ29 371 aaKnown RBP19.36■□□□□ 0.69
CDKN1B-201ENST00000228872 PCDHA4Q9UN74 947 aa19.36■□□□□ 0.69
CDKN1B-201ENST00000228872 ABCB11O95342 1321 aa19.36■□□□□ 0.69
CDKN1B-201ENST00000228872 SKAP2O75563 359 aaPredicted RBP19.36■□□□□ 0.69
CDKN1B-201ENST00000228872 FLT3P36888 993 aa19.36■□□□□ 0.69
CDKN1B-201ENST00000228872 CRELD2Q6UXH1 353 aaPredicted RBP19.36■□□□□ 0.69
CDKN1B-201ENST00000228872 FBXO33Q7Z6M2 555 aa19.36■□□□□ 0.69
CDKN1B-201ENST00000228872 CCDC197Q8NCU1 140 aa19.36■□□□□ 0.69
CDKN1B-201ENST00000228872 NSMCE1Q8WV22 266 aa19.36■□□□□ 0.69
CDKN1B-201ENST00000228872 CHMP6Q96FZ7 201 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms