RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Miga1Q4QQM5 600 aa17.65■□□□□ 0.42
Col17a1-202ENSMUST00000086923 OcrlQ6NVF0 900 aa17.65■□□□□ 0.42
Col17a1-202ENSMUST00000086923 B020011L13RikA0A087WQI7 412 aa17.65■□□□□ 0.42
Col17a1-202ENSMUST00000086923 Ugt1a6bK9J7B2 531 aa17.65■□□□□ 0.42
Col17a1-202ENSMUST00000086923 Pold1P52431 1105 aa17.65■□□□□ 0.42
Col17a1-202ENSMUST00000086923 Ugt1a6Q64435 531 aa17.65■□□□□ 0.42
Col17a1-202ENSMUST00000086923 Ugt1a7cQ6ZQM8 531 aa17.65■□□□□ 0.42
Col17a1-202ENSMUST00000086923 Afap1Q80YS6 731 aa17.65■□□□□ 0.42
Col17a1-202ENSMUST00000086923 BlmhQ8R016 455 aa17.65■□□□□ 0.42
Col17a1-202ENSMUST00000086923 Tmem143Q8VD26 458 aa17.65■□□□□ 0.42
Col17a1-202ENSMUST00000086923 Gtf2ird1Q9JI57 1104 aaKnown RBP17.65■□□□□ 0.42
Col17a1-202ENSMUST00000086923 Eya2O08575 532 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Krt42Q6IFX2 452 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Trmt1Q3TX08 663 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Zfp956Q3UZY6 572 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Tmem232Q5K6N0 675 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Tspan9Q8BJU2 239 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Mzf1S4R1L6 814 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Tmprss15P97435 1069 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Tbc1d9bQ5SVR0 1263 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Bud13Q8R149 637 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Pold4Q9CWP8 107 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Hyou1Q9JKR6 999 aaKnown RBP17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Rexo5D3YW29 759 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Top3aO70157 1003 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 IkbkbO88351 757 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Kiaa1468Q148V7 1216 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Ttc26Q8BS45 554 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Thap2Q9D305 217 aa17.64■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Caskin1Q6P9K8 1431 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Arid3aQ62431 601 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Olfml3Q8BK62 406 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Ufl1Q8CCJ3 793 aaKnown RBP17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Ddx28Q9CWT6 540 aaKnown RBP17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Itpripl1A2ASA8 547 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Armc2Q3URY6 854 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Grk4O70291 574 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Krt86P97861 486 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Itih3Q61704 889 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Tc2nQ91XT6 489 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Cd2bp2Q9CWK3 342 aaKnown RBP17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Pex11aQ9Z211 246 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Zfp804bA0A0G2JGH6 1343 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Krt24A1L317 512 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 TsksO54887 585 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Klrb1Q0ZUP1 214 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Phf8Q80TJ7 1023 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Snip1Q8BIZ6 383 aaKnown RBP17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Cog5Q8C0L8 829 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Tor1aip1Q921T2 595 aaKnown RBP17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Rtn3Q9ES97 964 aa17.63■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Olfml2bQ3V1G4 746 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 MaeaQ4VC33 396 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Flot2Q60634 428 aaKnown RBP17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Arhgef1Q61210 920 aaKnown RBP17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Cfap61Q8CEL2 1252 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Foxp3Q99JB6 429 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Gfpt2Q9Z2Z9 682 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Serpinb8O08800 374 aaKnown RBP17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Atp9aO70228 1047 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Gstt1Q64471 240 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Acad11Q80XL6 779 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Pank4Q80YV4 820 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Sptlc3Q8BG54 563 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Ccdc169Q8BXX9 214 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Gm8257E9Q8R3 264 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Cyp26b1Q811W2 512 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Krt36B1AQ75 473 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Carmil2Q3V3V9 1296 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Slf2Q6P9P0 1278 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Klhl38Q8BSF5 581 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Wdr62Q3U3T8 1523 aa17.62■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Pla2g4bP0C871 782 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Q3UJC8 639 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 PicalmQ7M6Y3 660 aaKnown RBP17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Dhx38Q80X98 1228 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Trap1Q9CQN1 706 aaKnown RBP17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 1700013H16RikQ9DAC5 291 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Ankrd26Q811D2 1581 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Tnip3A0A1D5RMN0 279 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 D1Pas1P16381 660 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Psmd7P26516 321 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Hspa8P63017 646 aaKnown RBP17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Ddx55Q6ZPL9 600 aaKnown RBP17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 AmphQ7TQF7 686 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 AacsQ9D2R0 672 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Msh2P43247 935 aaKnown RBP17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Cav1P49817 178 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 RalgdsQ03385 852 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 ItgadQ3V0T4 1168 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Swi5Q8K3D3 89 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Smyd3Q9CWR2 428 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Polr3cQ9D483 533 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Oip5A2AQ14 241 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Hsf3D0VYS2 492 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Casp12O08736 419 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Pth1rP41593 591 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Zkscan8Q8BSL0 588 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Rev1Q920Q2 1249 aa17.61■□□□□ 0.41
Col17a1-202ENSMUST00000086923 Camsap1A2AHC3 1581 aa17.61■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms