Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Gm25239-201ENSMUST00000174915 86 ntBASIC39.03■■■■□ 3.84
Rtn3Q9ES97 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.39
Rtn3Q9ES97 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.04■■■■□ 3.36
Rtn3Q9ES97 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
Rtn3Q9ES97 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Rtn3Q9ES97 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.95■■■■□ 3.19
Rtn3Q9ES97 Gm15042-201ENSMUST00000120212 883 ntBASIC34.21■■■■□ 3.07
Rtn3Q9ES97 Psd-208ENSMUST00000224556 2034 ntBASIC33.84■■■■□ 3.01
Rtn3Q9ES97 Gm24109-201ENSMUST00000175489 103 ntBASIC33.73■■■□□ 2.99
Rtn3Q9ES97 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Rtn3Q9ES97 Gm15045-201ENSMUST00000117359 883 ntBASIC33.39■■■□□ 2.94
Rtn3Q9ES97 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Rtn3Q9ES97 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
Rtn3Q9ES97 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Rtn3Q9ES97 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
Rtn3Q9ES97 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Rtn3Q9ES97 Gm23366-201ENSMUST00000175022 89 ntBASIC32.68■■■□□ 2.82
Rtn3Q9ES97 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Rtn3Q9ES97 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Rtn3Q9ES97 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.51■■■□□ 2.79
Rtn3Q9ES97 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Rtn3Q9ES97 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rtn3Q9ES97 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Rtn3Q9ES97 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Rtn3Q9ES97 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
Rtn3Q9ES97 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Rtn3Q9ES97 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Rtn3Q9ES97 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Rtn3Q9ES97 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Rtn3Q9ES97 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Rtn3Q9ES97 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
Rtn3Q9ES97 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Rtn3Q9ES97 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Rtn3Q9ES97 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
Rtn3Q9ES97 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.59■■■□□ 2.65
Rtn3Q9ES97 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rtn3Q9ES97 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.44■■■□□ 2.62
Rtn3Q9ES97 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Rtn3Q9ES97 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Rtn3Q9ES97 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.33■■■□□ 2.61
Rtn3Q9ES97 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rtn3Q9ES97 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.22■■■□□ 2.59
Rtn3Q9ES97 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.17■■■□□ 2.58
Rtn3Q9ES97 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Rtn3Q9ES97 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Rtn3Q9ES97 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31■■■□□ 2.55
Rtn3Q9ES97 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Rtn3Q9ES97 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.97■■■□□ 2.55
Rtn3Q9ES97 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Rtn3Q9ES97 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Rtn3Q9ES97 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.87■■■□□ 2.53
Rtn3Q9ES97 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.76■■■□□ 2.52
Rtn3Q9ES97 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.76■■■□□ 2.51
Rtn3Q9ES97 Gm25238-201ENSMUST00000174914 89 ntBASIC30.75■■■□□ 2.51
Rtn3Q9ES97 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rtn3Q9ES97 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Rtn3Q9ES97 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Rtn3Q9ES97 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Rtn3Q9ES97 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Rtn3Q9ES97 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Rtn3Q9ES97 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.33■■■□□ 2.45
Rtn3Q9ES97 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
Rtn3Q9ES97 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rtn3Q9ES97 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Rtn3Q9ES97 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.12■■■□□ 2.41
Rtn3Q9ES97 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Rtn3Q9ES97 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Rtn3Q9ES97 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Rtn3Q9ES97 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rtn3Q9ES97 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rtn3Q9ES97 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.98■■■□□ 2.39
Rtn3Q9ES97 Gm27325-201ENSMUST00000175467 74 ntBASIC29.98■■■□□ 2.39
Rtn3Q9ES97 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.98■■■□□ 2.39
Rtn3Q9ES97 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rtn3Q9ES97 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.95■■■□□ 2.39
Rtn3Q9ES97 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
Rtn3Q9ES97 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Rtn3Q9ES97 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
Rtn3Q9ES97 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Rtn3Q9ES97 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Rtn3Q9ES97 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Rtn3Q9ES97 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Rtn3Q9ES97 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.79■■■□□ 2.36
Rtn3Q9ES97 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.75■■■□□ 2.35
Rtn3Q9ES97 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.75■■■□□ 2.35
Rtn3Q9ES97 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
Rtn3Q9ES97 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Rtn3Q9ES97 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
Rtn3Q9ES97 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Rtn3Q9ES97 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Rtn3Q9ES97 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Rtn3Q9ES97 Gm25262-201ENSMUST00000174934 133 ntBASIC29.53■■■□□ 2.32
Rtn3Q9ES97 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rtn3Q9ES97 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Rtn3Q9ES97 Rab21-202ENSMUST00000218831 843 ntBASIC29.43■■■□□ 2.3
Rtn3Q9ES97 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Rtn3Q9ES97 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Rtn3Q9ES97 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Rtn3Q9ES97 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.34■■■□□ 2.29
Rtn3Q9ES97 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms