RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 MagohP61327 146 aaKnown RBP18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Gcnt1Q09324 428 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Esyt2Q3TZZ7 845 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Lrrfip1Q3UZ39 729 aaKnown RBP18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Rasgrp4Q8BTM9 673 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Fermt3Q8K1B8 665 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Bud13Q8R149 637 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Slc35f6Q8VE96 372 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 MagohbQ9CQL1 146 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 4931423N10RikQ9D4J9 382 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Zmym2Q9CU65 1376 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Pfkfb2P70265 519 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Aak1Q3UHJ0 959 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Six2Q62232 296 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Ppp1r3aQ99MR9 1089 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Apba1B2RUJ5 842 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Nova2D3YVV7 556 aaKnown RBP18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Pde8aO88502 823 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Oprl1P35377 367 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Nf2P46662 596 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Mcl1P97287 331 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Muc3aQ3U5A2 218 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Asic1Q6NXK8 526 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Rnaseh2bQ80ZV0 308 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Psmd2Q8VDM4 908 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Pdxdc1Q99K01 787 aaKnown RBP18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 ArpinQ9D0A3 226 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 SarnpQ9D1J3 210 aaKnown RBP18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Pramef12Q9D2F1 463 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Cacna2d3Q9Z1L5 1091 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Lamb2Q61292 1799 aa18.47■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Tuft1O08970 390 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Ctnna1P26231 906 aaKnown RBP18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 TbcaP48428 108 aaKnown RBP18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 NcstnP57716 708 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Nhej1Q3KNJ2 295 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 DcakdQ8BHC4 231 aaKnown RBP18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 1700020D05RikQ99PB1 294 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Myo5aQ99104 1853 aaKnown RBP18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Pabpc1lA2A5N3 607 aaKnown RBP18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Pdk4O70571 412 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Ephb4P54761 987 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Tnni3kQ5GIG6 834 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Trpc6Q61143 930 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Tmc3Q7TQ69 1130 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 GanQ8CA72 597 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Fam133bQ9CVI2 245 aaKnown RBP18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Atp6v1e2Q9D593 226 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Nup50Q9JIH2 466 aaKnown RBP18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Capn15Q9JLG8 1095 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Krt35Q497I4 455 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Q6PD19 689 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 PhykplQ8R1K4 467 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 NptxrQ99J85 493 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Q99KU6 348 aa18.46■□□□□ 0.55
Ctcf-201ENSMUST00000005841 Rap1gds1E9Q912 607 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Lrrn4P59383 733 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 MyrflQ3UN70 904 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Bzw1Q9CQC6 419 aaKnown RBP18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Hdac6Q9Z2V5 1149 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Zfp651E9PZ11 729 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Lrrc10bG3XA50 292 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 SlmapQ3URD3 845 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Ccnl1Q52KE7 532 aaKnown RBP18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 MogsQ80UM7 834 aaKnown RBP18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Ndufv1Q91YT0 464 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Golph3Q9CRA5 298 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Tacc2Q9JJG0 1149 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Lgr5Q9Z1P4 907 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Gm28036V9GXJ1 658 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Gm28360A0A087WR25 190 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Gm7168A0AUV4 508 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Orc4O88708 433 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 GartQ64737 1010 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Tekt3Q6X6Z7 490 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 PpatQ8CIH9 517 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Lrrc34Q9DAM1 415 aa18.45■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Cep85lA0A1W2P884 806 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Hdgfl1Q2VPR5 283 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Kctd16Q5DTY9 427 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 IscuQ9D7P6 168 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Prr5lA2AVJ5 370 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Ercc5P35689 1170 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Eps15P42567 897 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Armcx3Q8BHS6 379 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Thap3Q8BJ25 218 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Klhl7Q8BUL5 586 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Als2cr12Q8BVM7 383 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 MyripQ8K3I4 856 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Trpm8Q8R4D5 1104 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Rabl3Q9D4V7 236 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Kcnh4A2A5F7 1018 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Kif5cP28738 956 aaKnown RBP18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Rtkn2Q14B46 604 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Q3UTZ3 580 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Grhl1Q921D9 618 aa18.44■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Klrb1Q0ZUP1 214 aa18.43■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Fhdc1Q3ULZ2 1149 aa18.43■□□□□ 0.54
Ctcf-201ENSMUST00000005841 Lrig2Q52KR2 1054 aa18.43■□□□□ 0.54
Ctcf-201ENSMUST00000005841 NcaldQ91X97 193 aa18.43■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms