RNA–Protein interactions for RNA: YDR121W

DPB4, Transcript of Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex, yeast

Gene DPB4, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB4	YDR121W	YPL108W	Q02872	168 aa	Predicted RBP	4.05	□□□□□ -1.76
DPB4	YDR121W	RLI1	Q03195	608 aa	Known RBP	4.05	□□□□□ -1.76
DPB4	YDR121W	DAS2	Q12084	232 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	LDB17	Q12342	491 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	RMD5	Q12508	421 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	YBL111C	Q3E7Y5	667 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	PNO1	Q99216	274 aa	Known RBP	4.05	□□□□□ -1.76
DPB4	YDR121W	VCX1	Q99385	411 aa		4.05	□□□□□ -1.76
DPB4	YDR121W	AMD1	P15274	810 aa	Known RBP	4.04	□□□□□ -1.76
DPB4	YDR121W	RRP43	P25359	394 aa	Predicted RBP	4.04	□□□□□ -1.76
DPB4	YDR121W	OCA4	P25366	362 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	SIN4	P32259	974 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	NDI1	P32340	513 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	MVD1	P32377	396 aa	Known RBP	4.04	□□□□□ -1.76
DPB4	YDR121W	DCG1	P32460	244 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	HXT1	P32465	570 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	PRP18	P33411	251 aa	Predicted RBP	4.04	□□□□□ -1.76
DPB4	YDR121W	NTR2	P36118	322 aa	Predicted RBP	4.04	□□□□□ -1.76
DPB4	YDR121W	RCK2	P38623	610 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	TCD1	P38756	429 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	UTP9	P38882	575 aa	Known RBP	4.04	□□□□□ -1.76
DPB4	YDR121W	PLB1	P39105	664 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	YJL193W	P39542	402 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	LCP5	P40079	357 aa	Predicted RBP	4.04	□□□□□ -1.76
DPB4	YDR121W	ALG8	P40351	577 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	JEM1	P40358	645 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	IME4	P41833	600 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	YJL107C	P42947	387 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	IKS1	P47042	667 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	UBX6	P47049	396 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	COS12	P53053	380 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	ZRG17	P53735	605 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	EFM6	P53970	246 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	OSH6	Q02201	448 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	YLR030W	Q07967	263 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	SLD7	Q08457	257 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	RCN2	Q12044	265 aa		4.04	□□□□□ -1.76
DPB4	YDR121W	NOP58	Q12499	511 aa	Known RBP	4.04	□□□□□ -1.76
DPB4	YDR121W	ILS1	P09436	1072 aa	Known RBP	4.03	□□□□□ -1.76
DPB4	YDR121W	CBS1	P14066	229 aa		4.03	□□□□□ -1.76
DPB4	YDR121W	PRP6	P19735	899 aa	Predicted RBP	4.03	□□□□□ -1.76
DPB4	YDR121W	KAR4	P25583	335 aa		4.03	□□□□□ -1.76
DPB4	YDR121W	FMP46	P36141	133 aa	Known RBP	4.03	□□□□□ -1.76
DPB4	YDR121W	END3	P39013	349 aa		4.03	□□□□□ -1.76
DPB4	YDR121W	CAJ1	P39101	391 aa		4.03	□□□□□ -1.76
DPB4	YDR121W	MEF2	P39677	819 aa		4.03	□□□□□ -1.76
DPB4	YDR121W	SEO1	P39709	593 aa		4.03	□□□□□ -1.76
DPB4	YDR121W	PIG2	P40187	538 aa		4.03	□□□□□ -1.76
DPB4	YDR121W	YJL068C	P40363	299 aa		4.03	□□□□□ -1.76
DPB4	YDR121W	PFK26	P40433	827 aa	Known RBP	4.03	□□□□□ -1.76
DPB4	YDR121W	YGR054W	P53235	642 aa	Known RBP	4.03	□□□□□ -1.76
DPB4	YDR121W	BTN2	P53286	410 aa		4.03	□□□□□ -1.76
DPB4	YDR121W	YPR003C	P53394	754 aa		4.03	□□□□□ -1.76
DPB4	YDR121W	AAT1	Q01802	451 aa		4.03	□□□□□ -1.76
DPB4	YDR121W	CCE1	Q03702	353 aa		4.03	□□□□□ -1.76
DPB4	YDR121W	RRP45	Q05636	305 aa	Known RBP	4.03	□□□□□ -1.76
DPB4	YDR121W	YOL024W	Q08172	172 aa		4.03	□□□□□ -1.76
DPB4	YDR121W	NOP12	Q08208	459 aa	Known RBP	4.03	□□□□□ -1.76
DPB4	YDR121W	ISA2	Q12425	185 aa		4.03	□□□□□ -1.76
DPB4	YDR121W	AVL9	Q12500	764 aa		4.03	□□□□□ -1.76
DPB4	YDR121W	FAS1	P07149	2051 aa	Known RBP	4.02	□□□□□ -1.77
DPB4	YDR121W	BCY1	P07278	416 aa	Known RBP	4.02	□□□□□ -1.77
DPB4	YDR121W	GID7	P25569	745 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	POL4	P25615	582 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	IMG1	P25626	169 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	ATP11	P32453	318 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	DEF1	P35732	738 aa	Known RBP	4.02	□□□□□ -1.77
DPB4	YDR121W	CTP1	P38152	299 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	TRM7	P38238	310 aa	Known RBP	4.02	□□□□□ -1.77
DPB4	YDR121W	TDP1	P38319	544 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	MTG2	P38860	518 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	YHR210C	P38893	341 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	YFR020W	P43600	232 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	AAD10	P47182	288 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	LCL3	P53153	274 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	SGF73	P53165	657 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	FHN1	P53279	174 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	PEX25	Q02969	394 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	RPN9	Q04062	393 aa	Known RBP	4.02	□□□□□ -1.77
DPB4	YDR121W	YLR345W	Q06137	509 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	VTA1	Q06263	330 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	ARR3	Q06598	404 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	RXT3	Q07458	294 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	YPL272C	Q08984	517 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	NUS1	Q12063	375 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	CHS5	Q12114	671 aa	Known RBP	4.02	□□□□□ -1.77
DPB4	YDR121W	TMS1	Q12116	473 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	LYS21	Q12122	440 aa	Known RBP	4.02	□□□□□ -1.77
DPB4	YDR121W	NMD4	Q12129	218 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	GTT2	Q12390	233 aa		4.02	□□□□□ -1.77
DPB4	YDR121W	ERG27	Q12452	347 aa	Known RBP	4.02	□□□□□ -1.77
DPB4	YDR121W	SOD2	P00447	233 aa		4.01	□□□□□ -1.77
DPB4	YDR121W	LAT1	P12695	482 aa	Known RBP	4.01	□□□□□ -1.77
DPB4	YDR121W	YCR061W	P25639	631 aa		4.01	□□□□□ -1.77
DPB4	YDR121W	YCR099C	P25657	155 aa		4.01	□□□□□ -1.77
DPB4	YDR121W	SMI1	P32566	505 aa		4.01	□□□□□ -1.77
DPB4	YDR121W	STB6	P36085	766 aa		4.01	□□□□□ -1.77
DPB4	YDR121W	RPF2	P36160	344 aa	Known RBP	4.01	□□□□□ -1.77
DPB4	YDR121W	PCH2	P38126	564 aa		4.01	□□□□□ -1.77
DPB4	YDR121W	MRP21	P38175	177 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 46 ms