RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W ITR1P30605 584 aa0.63□□□□□ -2.31
UTP20YBL004W TIP20P33891 701 aa0.63□□□□□ -2.31
UTP20YBL004W YNL200CP40165 246 aaKnown RBP0.63□□□□□ -2.31
UTP20YBL004W YIL165CP40446 119 aa0.63□□□□□ -2.31
UTP20YBL004W IRC6P43615 237 aa0.63□□□□□ -2.31
UTP20YBL004W PHB2P50085 310 aa0.63□□□□□ -2.31
UTP20YBL004W SMM1P53720 384 aaKnown RBP0.63□□□□□ -2.31
UTP20YBL004W RVB1Q03940 463 aaKnown RBP0.63□□□□□ -2.31
UTP20YBL004W TSR1Q07381 788 aaKnown RBP0.63□□□□□ -2.31
UTP20YBL004W NUR1Q12066 484 aa0.63□□□□□ -2.31
UTP20YBL004W ARF2P19146 181 aaKnown RBP0.63□□□□□ -2.31
UTP20YBL004W MDH3P32419 343 aaKnown RBP RIP-Chip data0.63□□□□□ -2.31not detected
UTP20YBL004W YER034WP40022 185 aaKnown RBP0.63□□□□□ -2.31
UTP20YBL004W YEN1P40028 759 aa0.63□□□□□ -2.31
UTP20YBL004W PEX8P53248 589 aa0.63□□□□□ -2.31
UTP20YBL004W YPR196WQ06595 470 aa0.63□□□□□ -2.31
UTP20YBL004W VPS36Q06696 566 aa0.63□□□□□ -2.31
UTP20YBL004W FAL1Q12099 399 aaKnown RBP0.63□□□□□ -2.31
UTP20YBL004W SEY1Q99287 776 aa0.63□□□□□ -2.31
UTP20YBL004W FPS1P23900 669 aa0.63□□□□□ -2.31
UTP20YBL004W DMC1P25453 334 aa0.63□□□□□ -2.31
UTP20YBL004W SCC4P40090 624 aa0.63□□□□□ -2.31
UTP20YBL004W YNL194CP40169 301 aa0.63□□□□□ -2.31
UTP20YBL004W QDR2P40474 542 aa0.63□□□□□ -2.31
UTP20YBL004W SAD1P43589 448 aa0.63□□□□□ -2.31
UTP20YBL004W FMN1Q03778 218 aa0.63□□□□□ -2.31
UTP20YBL004W ARO80Q04052 950 aa0.63□□□□□ -2.31
UTP20YBL004W CSI1Q04368 295 aa0.63□□□□□ -2.31
UTP20YBL004W VTS1Q08831 523 aaKnown RBP RIP-Chip data0.63□□□□□ -2.31not detected
UTP20YBL004W ARP7Q12406 477 aa0.63□□□□□ -2.31
UTP20YBL004W IES6P32617 166 aa0.62□□□□□ -2.31
UTP20YBL004W SUI1P32911 108 aaKnown RBP0.62□□□□□ -2.31
UTP20YBL004W NDE1P40215 560 aa0.62□□□□□ -2.31
UTP20YBL004W RPS29BP41058 56 aaKnown RBP0.62□□□□□ -2.31
UTP20YBL004W CNN1P43618 361 aa0.62□□□□□ -2.31
UTP20YBL004W YJL055WP47044 245 aa0.62□□□□□ -2.31
UTP20YBL004W ESBP6P53918 673 aa0.62□□□□□ -2.31
UTP20YBL004W SKI8Q02793 397 aaPredicted RBP0.62□□□□□ -2.31
UTP20YBL004W GIP3Q03016 1276 aa0.62□□□□□ -2.31
UTP20YBL004W YPL039WQ03080 316 aa0.62□□□□□ -2.31
UTP20YBL004W ARX1Q03862 593 aaKnown RBP0.62□□□□□ -2.31
UTP20YBL004W ERB1Q04660 807 aaKnown RBP0.62□□□□□ -2.31
UTP20YBL004W RIB2Q12362 591 aaKnown RBP0.62□□□□□ -2.31
UTP20YBL004W ARG4P04076 463 aaPredicted RBP0.62□□□□□ -2.31
UTP20YBL004W YKL187CP34231 750 aa0.62□□□□□ -2.31
UTP20YBL004W PTC1P35182 281 aa0.62□□□□□ -2.31
UTP20YBL004W MPC2P38857 129 aa0.62□□□□□ -2.31
UTP20YBL004W SWD1P39706 426 aa0.62□□□□□ -2.31
UTP20YBL004W PIC2P40035 300 aa0.62□□□□□ -2.31
UTP20YBL004W GAT4P40569 121 aa0.62□□□□□ -2.31
UTP20YBL004W GCD14P46959 383 aaPredicted RBP0.62□□□□□ -2.31
UTP20YBL004W RPC11Q04307 110 aaPredicted RBP0.62□□□□□ -2.31
UTP20YBL004W PSK2Q08217 1101 aa0.62□□□□□ -2.31
UTP20YBL004W COS2P0CX12 379 aa0.62□□□□□ -2.31
UTP20YBL004W COS3P0CX13 379 aa0.62□□□□□ -2.31
UTP20YBL004W INO1P11986 533 aa0.62□□□□□ -2.31
UTP20YBL004W HNM1P19807 563 aa0.62□□□□□ -2.31
UTP20YBL004W CNA1P23287 553 aa0.62□□□□□ -2.31
UTP20YBL004W GSY1P23337 708 aa0.62□□□□□ -2.31
UTP20YBL004W YCL002CP25565 263 aa0.62□□□□□ -2.31
UTP20YBL004W YOR062CP36025 268 aa0.62□□□□□ -2.31
UTP20YBL004W PIH1P38768 344 aa0.62□□□□□ -2.31
UTP20YBL004W COS4P43542 379 aa0.62□□□□□ -2.31
UTP20YBL004W VTC4P47075 721 aa0.62□□□□□ -2.31
UTP20YBL004W ECL1P48235 211 aa0.62□□□□□ -2.31
UTP20YBL004W NOP15P53927 220 aaPredicted RBP0.62□□□□□ -2.31
UTP20YBL004W ADI1Q03677 179 aa0.62□□□□□ -2.31
UTP20YBL004W RKM1Q08961 583 aaPredicted RBP0.62□□□□□ -2.31
UTP20YBL004W YOR111WQ99210 232 aa0.62□□□□□ -2.31
UTP20YBL004W TUF1P02992 437 aaKnown RBP0.62□□□□□ -2.31
UTP20YBL004W MSI1P13712 422 aa0.62□□□□□ -2.31
UTP20YBL004W URA7P28274 579 aaKnown RBP0.62□□□□□ -2.31
UTP20YBL004W MTH1P35198 433 aa0.62□□□□□ -2.31
UTP20YBL004W ARN2P38724 620 aa0.62□□□□□ -2.31
UTP20YBL004W APE4P38821 490 aa0.62□□□□□ -2.31
UTP20YBL004W YER184CP39961 794 aa0.62□□□□□ -2.31
UTP20YBL004W TAN1P53072 289 aaPredicted RBP0.62□□□□□ -2.31
UTP20YBL004W GEP7P53171 287 aa0.62□□□□□ -2.31
UTP20YBL004W ATG21Q02887 496 aa0.62□□□□□ -2.31
UTP20YBL004W ARP10Q04549 284 aa0.62□□□□□ -2.31
UTP20YBL004W DFM1Q12743 341 aaKnown RBP0.62□□□□□ -2.31
UTP20YBL004W TAD3Q9URQ3 322 aa0.62□□□□□ -2.31
UTP20YBL004W HIS1P00498 297 aaKnown RBP0.62□□□□□ -2.31
UTP20YBL004W SPS100P13130 326 aa0.62□□□□□ -2.31
UTP20YBL004W PDX1P16451 410 aa0.62□□□□□ -2.31
UTP20YBL004W DIT1P21623 536 aa0.62□□□□□ -2.31
UTP20YBL004W PDC2P32896 925 aa0.62□□□□□ -2.31
UTP20YBL004W CHK1P38147 527 aa0.62□□□□□ -2.31
UTP20YBL004W RGD2P43556 714 aa0.62□□□□□ -2.31
UTP20YBL004W TAF6P53040 516 aa0.62□□□□□ -2.31
UTP20YBL004W NPY1P53164 384 aa0.62□□□□□ -2.31
UTP20YBL004W RSM27P53305 110 aa0.62□□□□□ -2.31
UTP20YBL004W IRC15Q02733 499 aa0.62□□□□□ -2.31
UTP20YBL004W YOL075CQ08234 1294 aa0.62□□□□□ -2.31
UTP20YBL004W FRE3Q08905 711 aa0.62□□□□□ -2.31
UTP20YBL004W NIP7Q08962 181 aaKnown RBP0.62□□□□□ -2.31
UTP20YBL004W SIR3P06701 978 aa0.62□□□□□ -2.31
UTP20YBL004W ARD1P07347 238 aaPredicted RBP0.62□□□□□ -2.31
UTP20YBL004W XRS2P33301 854 aa0.62□□□□□ -2.31
UTP20YBL004W RPA43P46669 326 aa0.62□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 116 ms