RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 CDCA7Q9BWT1 371 aaPredicted RBP11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 VIPAS39Q9H9C1 493 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 MLXIPLQ9NP71 852 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 USP21Q9UK80 565 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 CUL7Q14999 1698 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 RHOBTB1O94844 696 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 HLA-DPA1P20036 260 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 RAB14P61106 215 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 TRIP13Q15645 432 aaPredicted RBP11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 LMBR1LQ6UX01 489 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 ANKRD13DQ6ZTN6 518 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 RAB44Q7Z6P3 723 aaPredicted RBP11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 PALD1Q9ULE6 856 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 PCDHA5Q9Y5H7 936 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 VCAM1P19320 739 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 TCIRG1Q13488 830 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 IQCB1Q15051 598 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 KRT31Q15323 416 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 SPATA21Q7Z572 469 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 CATSPER3Q86XQ3 398 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 MYL10Q9BUA6 226 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 DNAJC17Q9NVM6 304 aaKnown RBP11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 SLC4A1P02730 911 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 MLH1P40692 756 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 NSFP46459 744 aaKnown RBP11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 PMS2P54278 862 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 BTKQ06187 659 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 MKRN3Q13064 507 aaKnown RBP11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 ARHGEF25Q86VW2 580 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 RTEL1Q9NZ71 1219 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 DNM3Q9UQ16 869 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 ARL2BPQ9Y2Y0 163 aa11.75□□□□□ -0.53
KCNMA1-259ENST00000639406 KITP10721 976 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 HSPA9P38646 679 aaKnown RBP11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 LRRC14Q15048 493 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 TMTC4Q5T4D3 741 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 GOLGA8IPA6NC78 632 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 CD2BP2O95400 341 aaKnown RBP11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 CPP00450 1065 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 SERPINB2P05120 415 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 S100A5P33763 92 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 CALCRLQ16602 461 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 KSR2Q6VAB6 950 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 NOSTRINQ8IVI9 506 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 SIX5Q8N196 739 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 FAM133AQ8N9E0 248 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 PRMT1Q99873 361 aaKnown RBP11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 ACADSP16219 412 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 EIF4A3P38919 411 aaKnown RBP11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 NONOQ15233 471 aaKnown RBP eCLIP11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 LRRC36Q1X8D7 754 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 MFN1Q8IWA4 741 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 TUBGCP3Q96CW5 907 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 CNBD2Q96M20 576 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 ITGB1BP2Q9UKP3 347 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 TARSL2A2RTX5 802 aaKnown RBP11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 KRT25Q7Z3Z0 450 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 PLD3Q8IV08 490 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 CCDC103Q8IW40 242 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 BRD8Q9H0E9 1235 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 RNPEPQ9H4A4 650 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 IL1RAPL1Q9NZN1 696 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 IQGAP2Q13576 1575 aa11.74□□□□□ -0.53
KCNMA1-259ENST00000639406 VHLP40337 213 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 HIC1Q14526 733 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 ZC3H15Q8WU90 426 aaKnown RBP11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 ZSWIM6Q9HCJ5 1215 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 ARMCX3Q9UH62 379 aaPredicted RBP11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 H7C0C1 242 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 IPO5O00410 1097 aaKnown RBP11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 MFAP3LO75121 409 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 E2F6O75461 281 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 APBA3O96018 575 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 CD19P15391 556 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 ATP5OP48047 213 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 EIF2B2P49770 351 aaKnown RBP11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 VSNL1P62760 191 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 NR1H3Q13133 447 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 ZFYVE19Q96K21 471 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 CUEDC2Q9H467 287 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 SAMSN1Q9NSI8 373 aaKnown RBP11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 RGL1Q9NZL6 768 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 PKD2L2Q9NZM6 624 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 MAN1B1Q9UKM7 699 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 CCDC188H7C350 402 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 HSPA4LO95757 839 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 DLGAP3O95886 979 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 SLC12A1Q13621 1099 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 RINT1Q6NUQ1 792 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 CFAP36Q96G28 342 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 TEX13AQ9BXU3 409 aaPredicted RBP11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 FAM96AQ9H5X1 160 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 CYP4F11Q9HBI6 524 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 SYBUQ9NX95 663 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 TOP2BQ02880 1626 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 ANP32DO95626 131 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 CCDC144BQ3MJ40 725 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 Q4G0T1 1027 aa11.73□□□□□ -0.53
KCNMA1-259ENST00000639406 RDH13Q8NBN7 331 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms