RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 LGALS2P05162 132 aa21.73■■□□□ 1.07
CLN6-213ENST00000636212 GNAT1P11488 350 aa21.73■■□□□ 1.07
CLN6-213ENST00000636212 KCNJ6P48051 423 aa21.73■■□□□ 1.07
CLN6-213ENST00000636212 METAP2P50579 478 aaKnown RBP eCLIP21.73■■□□□ 1.07
CLN6-213ENST00000636212 RBL2Q08999 1139 aa21.73■■□□□ 1.07
CLN6-213ENST00000636212 GRIN2CQ14957 1233 aa21.73■■□□□ 1.07
CLN6-213ENST00000636212 WWC2Q6AWC2 1192 aa21.73■■□□□ 1.07
CLN6-213ENST00000636212 Q6ZUG5 572 aa21.73■■□□□ 1.07
CLN6-213ENST00000636212 KCNB2Q92953 911 aa21.73■■□□□ 1.07
CLN6-213ENST00000636212 SLC9A7Q96T83 725 aa21.73■■□□□ 1.07
CLN6-213ENST00000636212 SNX14Q9Y5W7 946 aa21.73■■□□□ 1.07
CLN6-213ENST00000636212 V9GY48 417 aaPredicted RBP21.73■■□□□ 1.07
CLN6-213ENST00000636212 MAFGO15525 162 aa21.72■■□□□ 1.07
CLN6-213ENST00000636212 FOSP01100 380 aaPredicted RBP21.72■■□□□ 1.07
CLN6-213ENST00000636212 CKBP12277 381 aa21.72■■□□□ 1.07
CLN6-213ENST00000636212 ADCY7P51828 1080 aa21.72■■□□□ 1.07
CLN6-213ENST00000636212 SP4Q02446 784 aa21.72■■□□□ 1.07
CLN6-213ENST00000636212 MTMR1Q13613 665 aa21.72■■□□□ 1.07
CLN6-213ENST00000636212 GPR20Q99678 358 aa21.72■■□□□ 1.07
CLN6-213ENST00000636212 NKX2-4Q9H2Z4 354 aa21.72■■□□□ 1.07
CLN6-213ENST00000636212 RIC8AQ9NPQ8 531 aa21.72■■□□□ 1.07
CLN6-213ENST00000636212 PCDHA11Q9Y5I1 949 aa21.72■■□□□ 1.07
CLN6-213ENST00000636212 KIF28PB7ZC32 967 aa21.71■■□□□ 1.07
CLN6-213ENST00000636212 SEMA3FQ13275 785 aa21.71■■□□□ 1.07
CLN6-213ENST00000636212 UTP14CQ5TAP6 766 aaKnown RBP21.71■■□□□ 1.07
CLN6-213ENST00000636212 PHOSPHO2Q8TCD6 241 aa21.71■■□□□ 1.07
CLN6-213ENST00000636212 DHX38Q92620 1227 aaKnown RBP21.71■■□□□ 1.07
CLN6-213ENST00000636212 BRF1Q92994 677 aa21.71■■□□□ 1.07
CLN6-213ENST00000636212 ATP6V0A1Q93050 837 aa21.71■■□□□ 1.07
CLN6-213ENST00000636212 EPB41L2O43491 1005 aaKnown RBP21.7■■□□□ 1.06
CLN6-213ENST00000636212 SMIM10L2AP0DMW4 78 aa21.7■■□□□ 1.06
CLN6-213ENST00000636212 SMIM10L2BP0DMW5 78 aa21.7■■□□□ 1.06
CLN6-213ENST00000636212 APOBRQ0VD83 1088 aa21.7■■□□□ 1.06
CLN6-213ENST00000636212 PPP2R2DQ66LE6 453 aa21.7■■□□□ 1.06
CLN6-213ENST00000636212 CTAGE1Q96RT6 745 aa21.7■■□□□ 1.06
CLN6-213ENST00000636212 BCAS3Q9H6U6 928 aa21.7■■□□□ 1.06
CLN6-213ENST00000636212 BARHL2Q9NY43 387 aa21.7■■□□□ 1.06
CLN6-213ENST00000636212 SCN5AQ14524 2016 aa21.69■■□□□ 1.06
CLN6-213ENST00000636212 SMCO2A6NFE2 343 aa21.69■■□□□ 1.06
CLN6-213ENST00000636212 CENPBP07199 599 aaPredicted RBP21.69■■□□□ 1.06
CLN6-213ENST00000636212 CPA1P15085 419 aa21.69■■□□□ 1.06
CLN6-213ENST00000636212 RPS6KB1P23443 525 aa21.69■■□□□ 1.06
CLN6-213ENST00000636212 RABGGTBP53611 331 aa21.69■■□□□ 1.06
CLN6-213ENST00000636212 ZNF200P98182 395 aaPredicted RBP21.69■■□□□ 1.06
CLN6-213ENST00000636212 AKAP17AQ02040 695 aaKnown RBP21.69■■□□□ 1.06
CLN6-213ENST00000636212 CNKSR3Q6P9H4 555 aa21.69■■□□□ 1.06
CLN6-213ENST00000636212 CCDC12Q8WUD4 166 aaPredicted RBP21.69■■□□□ 1.06
CLN6-213ENST00000636212 VWCEQ96DN2 955 aa21.69■■□□□ 1.06
CLN6-213ENST00000636212 JADE2Q9NQC1 790 aa21.69■■□□□ 1.06
CLN6-213ENST00000636212 UBIAD1Q9Y5Z9 338 aa21.69■■□□□ 1.06
CLN6-213ENST00000636212 STXBP3O00186 592 aa21.68■■□□□ 1.06
CLN6-213ENST00000636212 EFCAB14O75071 495 aa21.68■■□□□ 1.06
CLN6-213ENST00000636212 ITGB5P18084 799 aa21.68■■□□□ 1.06
CLN6-213ENST00000636212 CDC27P30260 824 aa21.68■■□□□ 1.06
CLN6-213ENST00000636212 THPOP40225 353 aa21.68■■□□□ 1.06
CLN6-213ENST00000636212 FUT2Q10981 343 aa21.68■■□□□ 1.06
CLN6-213ENST00000636212 AP3B2Q13367 1082 aa21.68■■□□□ 1.06
CLN6-213ENST00000636212 SERINC5Q86VE9 423 aa21.68■■□□□ 1.06
CLN6-213ENST00000636212 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.68■■□□□ 1.06
CLN6-213ENST00000636212 SEPT1Q8WYJ6 367 aa21.68■■□□□ 1.06
CLN6-213ENST00000636212 YBX2Q9Y2T7 364 aaKnown RBP21.68■■□□□ 1.06
CLN6-213ENST00000636212 EMSYQ7Z589 1322 aa21.68■■□□□ 1.06
CLN6-213ENST00000636212 LAMA2P24043 3122 aaKnown RBP21.68■■□□□ 1.06
CLN6-213ENST00000636212 ADD1P35611 737 aaKnown RBP21.67■■□□□ 1.06
CLN6-213ENST00000636212 TCF7P36402 384 aaPredicted RBP21.67■■□□□ 1.06
CLN6-213ENST00000636212 ZNF618Q5T7W0 954 aa21.67■■□□□ 1.06
CLN6-213ENST00000636212 MCTP2Q6DN12 878 aa21.67■■□□□ 1.06
CLN6-213ENST00000636212 FBXL16Q8N461 479 aa21.67■■□□□ 1.06
CLN6-213ENST00000636212 MXRA8Q9BRK3 442 aa21.67■■□□□ 1.06
CLN6-213ENST00000636212 ANO3Q9BYT9 981 aa21.67■■□□□ 1.06
CLN6-213ENST00000636212 RNPEPQ9H4A4 650 aa21.67■■□□□ 1.06
CLN6-213ENST00000636212 PRDM12Q9H4Q4 367 aa21.67■■□□□ 1.06
CLN6-213ENST00000636212 PKD2L1Q9P0L9 805 aa21.67■■□□□ 1.06
CLN6-213ENST00000636212 ABHD14A-ACY1A0A1B0GW23 586 aa21.66■■□□□ 1.06
CLN6-213ENST00000636212 RSPH10B2B2RC85 870 aa21.66■■□□□ 1.06
CLN6-213ENST00000636212 ATP9AO75110 1047 aa21.66■■□□□ 1.06
CLN6-213ENST00000636212 CAND2O75155 1236 aa21.66■■□□□ 1.06
CLN6-213ENST00000636212 CXCL10P02778 98 aa21.66■■□□□ 1.06
CLN6-213ENST00000636212 RSPH10BP0C881 870 aa21.66■■□□□ 1.06
CLN6-213ENST00000636212 SCG2P13521 617 aa21.66■■□□□ 1.06
CLN6-213ENST00000636212 KCNA2P16389 499 aa21.66■■□□□ 1.06
CLN6-213ENST00000636212 ZNF76P36508 570 aa21.66■■□□□ 1.06
CLN6-213ENST00000636212 IKBKEQ14164 716 aa21.66■■□□□ 1.06
CLN6-213ENST00000636212 PFKFB3Q16875 520 aaPredicted RBP21.66■■□□□ 1.06
CLN6-213ENST00000636212 TRIM71Q2Q1W2 868 aaKnown RBP21.66■■□□□ 1.06
CLN6-213ENST00000636212 GLG1Q92896 1179 aa21.66■■□□□ 1.06
CLN6-213ENST00000636212 SDF4Q9BRK5 362 aa21.66■■□□□ 1.06
CLN6-213ENST00000636212 C6orf50Q9HD87 102 aa21.66■■□□□ 1.06
CLN6-213ENST00000636212 FAM217BQ9NTX9 383 aaPredicted RBP21.66■■□□□ 1.06
CLN6-213ENST00000636212 SETD4Q9NVD3 440 aa21.66■■□□□ 1.06
CLN6-213ENST00000636212 PPP4R2Q9NY27 417 aa21.66■■□□□ 1.06
CLN6-213ENST00000636212 TRIP12Q14669 1992 aaPredicted RBP21.65■■□□□ 1.06
CLN6-213ENST00000636212 NRCAMQ92823 1304 aa21.65■■□□□ 1.06
CLN6-213ENST00000636212 DLL1O00548 723 aa21.65■■□□□ 1.06
CLN6-213ENST00000636212 TYW1BQ6NUM6 668 aa21.65■■□□□ 1.06
CLN6-213ENST00000636212 TRIM50Q86XT4 487 aa21.65■■□□□ 1.06
CLN6-213ENST00000636212 HERC6Q8IVU3 1022 aa21.65■■□□□ 1.06
CLN6-213ENST00000636212 TNPO1Q92973 898 aaKnown RBP21.65■■□□□ 1.06
CLN6-213ENST00000636212 ZBED2Q9BTP6 218 aa21.65■■□□□ 1.06
CLN6-213ENST00000636212 SMARCAD1Q9H4L7 1026 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms