RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 TJAP1Q5JTD0 557 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 ADALQ6DHV7 355 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 TWF2Q6IBS0 349 aaKnown RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 ENAHQ8N8S7 591 aaPredicted RBP4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 SMYD1Q8NB12 490 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 KLHDC4Q8TBB5 520 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 DDI1Q8WTU0 396 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 CNKSR1Q969H4 720 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 COG8Q96MW5 612 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 USP26Q9BXU7 913 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 VPS33BQ9H267 617 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 CLSTN2Q9H4D0 955 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 OSBPL3Q9H4L5 887 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 USH1CQ9Y6N9 552 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 KIAA1210Q9ULL0 1709 aa4.24□□□□□ -1.73
R3HDM1-220ENST00000628915 SPHKAPQ2M3C7 1700 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 TRPA1O75762 1119 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 BBOX1O75936 387 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 ATP5HO75947 161 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 GFPT2O94808 682 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 SEC31AO94979 1220 aaKnown RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 RAPGEF3O95398 923 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 CLTAP09496 248 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 SFPQP23246 707 aaKnown RBP eCLIP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 MAPK1P28482 360 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 POLD2P49005 469 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 SULT1E1P49888 294 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 ZNF75DP51815 510 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 POLE2P56282 527 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 G3BP1Q13283 466 aaKnown RBP eCLIP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 SNW1Q13573 536 aaKnown RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 CUL1Q13616 776 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 VWA3BQ502W6 1294 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 C6orf118Q5T5N4 469 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 ZNF574Q6ZN55 896 aaPredicted RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 MFSD6Q6ZSS7 791 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 PALM2Q8IXS6 379 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 SGCDQ92629 289 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 COQ7Q99807 217 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 SPZ1Q9BXG8 430 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 MRPL46Q9H2W6 279 aaKnown RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 PALMDQ9NP74 551 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 ZC4H2Q9NQZ6 224 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 SPDYE5A6NIY4 337 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 EFCAB8A8MWE9 144 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 TTC34A8MYJ7 566 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 GOLGA8SH3BPF8 625 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 PSMD14O00487 310 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 TNFRSF10BO14763 440 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 SLC5A1P13866 664 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 SOX5P35711 763 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 USP11P51784 963 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 SEC13P55735 322 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 TUBB4BP68371 445 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 MAP3K11Q16584 847 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 TSGA10IPQ3SY00 556 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 BEND5Q7L4P6 421 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 TOR1AIP2Q8NFQ8 470 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 FAM163AQ96GL9 167 aaPredicted RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 MOGAT1Q96PD6 335 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 SMC6Q96SB8 1091 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 SIKE1Q9BRV8 207 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 IRX2Q9BZI1 471 aaPredicted RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 PSTPIP2Q9H939 334 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 PLEKHA5Q9HAU0 1116 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 NEUROD4Q9HD90 331 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 ZIM2Q9NZV7 527 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 PCDH10Q9P2E7 1040 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 ORC3Q9UBD5 711 aaPredicted RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 A2ML1A8K2U0 1454 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 E9PMD0 336 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 F5H423 210 aaPredicted RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 ZNF254O75437 659 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 GNAT1P11488 350 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 GLULP15104 373 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 TMED10P49755 219 aaKnown RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 PLCD1P51178 756 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 DSTNP60981 165 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 KLHL30Q0D2K2 578 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 CUL4AQ13619 759 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 CLPPQ16740 277 aaPredicted RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 WDR45BQ5MNZ6 344 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 CWF19L1Q69YN2 538 aaKnown RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 SPECC1LQ69YQ0 1117 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 PDXDC2PQ6P474 469 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 POMZP3Q6PJE2 187 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 CWC27Q6UX04 472 aaKnown RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 GPR161Q8N6U8 529 aaKnown RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 UBR7Q8N806 425 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 NPLOC4Q8TAT6 608 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 CCHCR1Q8TD31 782 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 ATP6V1G3Q96LB4 118 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 FRMD6Q96NE9 622 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 DDX18Q9NVP1 670 aaKnown RBP4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 DACH1Q9UI36 760 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 MOSPD1Q9UJG1 213 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 CAPN7Q9Y6W3 813 aa4.23□□□□□ -1.73
R3HDM1-220ENST00000628915 COL24A1Q17RW2 1714 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms