RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 NOP56O00567 594 aaKnown RBP19.7■□□□□ 0.74
HMGN3-203ENST00000620514 ATP9AO75110 1047 aa19.7■□□□□ 0.74
HMGN3-203ENST00000620514 CKBP12277 381 aa19.7■□□□□ 0.74
HMGN3-203ENST00000620514 MYOGP15173 224 aa19.7■□□□□ 0.74
HMGN3-203ENST00000620514 FOSL2P15408 326 aa19.7■□□□□ 0.74
HMGN3-203ENST00000620514 ITGB5P18084 799 aa19.7■□□□□ 0.74
HMGN3-203ENST00000620514 ADD1P35611 737 aaKnown RBP19.7■□□□□ 0.74
HMGN3-203ENST00000620514 NAPAP54920 295 aa19.7■□□□□ 0.74
HMGN3-203ENST00000620514 RBL2Q08999 1139 aa19.7■□□□□ 0.74
HMGN3-203ENST00000620514 PTK7Q13308 1070 aa19.7■□□□□ 0.74
HMGN3-203ENST00000620514 RAB30Q15771 203 aa19.7■□□□□ 0.74
HMGN3-203ENST00000620514 TRIM71Q2Q1W2 868 aaKnown RBP19.7■□□□□ 0.74
HMGN3-203ENST00000620514 BLOC1S2Q6QNY1 142 aa19.7■□□□□ 0.74
HMGN3-203ENST00000620514 LRRC8DQ7L1W4 858 aa19.7■□□□□ 0.74
HMGN3-203ENST00000620514 TRIM50Q86XT4 487 aa19.7■□□□□ 0.74
HMGN3-203ENST00000620514 BRF1Q92994 677 aa19.7■□□□□ 0.74
HMGN3-203ENST00000620514 MSRAQ9UJ68 235 aa19.7■□□□□ 0.74
HMGN3-203ENST00000620514 GBF1Q92538 1859 aa19.7■□□□□ 0.74
HMGN3-203ENST00000620514 TET1Q8NFU7 2136 aa19.7■□□□□ 0.74
HMGN3-203ENST00000620514 H3BRB1 525 aa19.69■□□□□ 0.74
HMGN3-203ENST00000620514 STXBP3O00186 592 aa19.69■□□□□ 0.74
HMGN3-203ENST00000620514 ACTN1P12814 892 aa19.69■□□□□ 0.74
HMGN3-203ENST00000620514 SELPP16109 830 aa19.69■□□□□ 0.74
HMGN3-203ENST00000620514 ATP2A2P16615 1042 aaKnown RBP19.69■□□□□ 0.74
HMGN3-203ENST00000620514 UTP14CQ5TAP6 766 aaKnown RBP19.69■□□□□ 0.74
HMGN3-203ENST00000620514 MAFAQ8NHW3 353 aaPredicted RBP19.69■□□□□ 0.74
HMGN3-203ENST00000620514 GPRASP2Q96D09 838 aa19.69■□□□□ 0.74
HMGN3-203ENST00000620514 PGBD1Q96JS3 809 aa19.69■□□□□ 0.74
HMGN3-203ENST00000620514 SENP7Q9BQF6 1050 aa19.69■□□□□ 0.74
HMGN3-203ENST00000620514 TUT1Q9H6E5 874 aaKnown RBP19.69■□□□□ 0.74
HMGN3-203ENST00000620514 PKD2L1Q9P0L9 805 aa19.69■□□□□ 0.74
HMGN3-203ENST00000620514 UBIAD1Q9Y5Z9 338 aa19.69■□□□□ 0.74
HMGN3-203ENST00000620514 CDH23Q9H251 3354 aa19.68■□□□□ 0.74
HMGN3-203ENST00000620514 REC8O95072 547 aa19.68■□□□□ 0.74
HMGN3-203ENST00000620514 SMIM10L2AP0DMW4 78 aa19.68■□□□□ 0.74
HMGN3-203ENST00000620514 SMIM10L2BP0DMW5 78 aa19.68■□□□□ 0.74
HMGN3-203ENST00000620514 KCNA2P16389 499 aa19.68■□□□□ 0.74
HMGN3-203ENST00000620514 METAP2P50579 478 aaKnown RBP eCLIP19.68■□□□□ 0.74
HMGN3-203ENST00000620514 RCAN1P53805 252 aa19.68■□□□□ 0.74
HMGN3-203ENST00000620514 TRAF7Q6Q0C0 670 aa19.68■□□□□ 0.74
HMGN3-203ENST00000620514 RIC8AQ9NPQ8 531 aa19.68■□□□□ 0.74
HMGN3-203ENST00000620514 C17orf102A2RUQ5 167 aa19.67■□□□□ 0.74
HMGN3-203ENST00000620514 NBNO60934 754 aa19.67■□□□□ 0.74
HMGN3-203ENST00000620514 RPS6KB1P23443 525 aa19.67■□□□□ 0.74
HMGN3-203ENST00000620514 ADCY7P51828 1080 aa19.67■□□□□ 0.74
HMGN3-203ENST00000620514 TCTN1Q2MV58 587 aa19.67■□□□□ 0.74
HMGN3-203ENST00000620514 ZNF618Q5T7W0 954 aa19.67■□□□□ 0.74
HMGN3-203ENST00000620514 PPP1R18Q6NYC8 613 aa19.67■□□□□ 0.74
HMGN3-203ENST00000620514 USP26Q9BXU7 913 aa19.67■□□□□ 0.74
HMGN3-203ENST00000620514 RNPEPQ9H4A4 650 aa19.67■□□□□ 0.74
HMGN3-203ENST00000620514 PRDM12Q9H4Q4 367 aa19.67■□□□□ 0.74
HMGN3-203ENST00000620514 JADE2Q9NQC1 790 aa19.67■□□□□ 0.74
HMGN3-203ENST00000620514 TMEM260Q9NX78 707 aa19.67■□□□□ 0.74
HMGN3-203ENST00000620514 BARHL2Q9NY43 387 aa19.67■□□□□ 0.74
HMGN3-203ENST00000620514 SMCO2A6NFE2 343 aa19.66■□□□□ 0.74
HMGN3-203ENST00000620514 TREHO43280 583 aa19.66■□□□□ 0.74
HMGN3-203ENST00000620514 HOXC8P31273 242 aa19.66■□□□□ 0.74
HMGN3-203ENST00000620514 MTMR1Q13613 665 aa19.66■□□□□ 0.74
HMGN3-203ENST00000620514 MBTPS1Q14703 1052 aa19.66■□□□□ 0.74
HMGN3-203ENST00000620514 SERINC5Q86VE9 423 aa19.66■□□□□ 0.74
HMGN3-203ENST00000620514 ATP6V0A1Q93050 837 aa19.66■□□□□ 0.74
HMGN3-203ENST00000620514 SLC28A3Q9HAS3 691 aa19.66■□□□□ 0.74
HMGN3-203ENST00000620514 PCDHA11Q9Y5I1 949 aa19.66■□□□□ 0.74
HMGN3-203ENST00000620514 hCG_1984214I3L0E3 225 aa19.65■□□□□ 0.74
HMGN3-203ENST00000620514 CXCL10P02778 98 aa19.65■□□□□ 0.74
HMGN3-203ENST00000620514 PFKFB3Q16875 520 aaPredicted RBP19.65■□□□□ 0.74
HMGN3-203ENST00000620514 ZNF713Q8N859 430 aaPredicted RBP19.65■□□□□ 0.74
HMGN3-203ENST00000620514 GIMAP8Q8ND71 665 aaPredicted RBP19.65■□□□□ 0.74
HMGN3-203ENST00000620514 CYP2W1Q8TAV3 490 aa19.65■□□□□ 0.74
HMGN3-203ENST00000620514 CDHR1Q96JP9 859 aa19.65■□□□□ 0.74
HMGN3-203ENST00000620514 ANO3Q9BYT9 981 aa19.65■□□□□ 0.74
HMGN3-203ENST00000620514 AGXT2Q9BYV1 514 aa19.65■□□□□ 0.74
HMGN3-203ENST00000620514 EHMT1Q9H9B1 1298 aa19.65■□□□□ 0.74
HMGN3-203ENST00000620514 SETD4Q9NVD3 440 aa19.65■□□□□ 0.74
HMGN3-203ENST00000620514 GSTTP1A0A1W2PQM5 241 aa19.64■□□□□ 0.73
HMGN3-203ENST00000620514 ADAMTS3O15072 1205 aa19.64■□□□□ 0.73
HMGN3-203ENST00000620514 PPFIA3O75145 1194 aa19.64■□□□□ 0.73
HMGN3-203ENST00000620514 PSMA5P28066 241 aa19.64■□□□□ 0.73
HMGN3-203ENST00000620514 TCF7P36402 384 aaPredicted RBP19.64■□□□□ 0.73
HMGN3-203ENST00000620514 THPOP40225 353 aa19.64■□□□□ 0.73
HMGN3-203ENST00000620514 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.64■□□□□ 0.73
HMGN3-203ENST00000620514 FBXL16Q8N461 479 aa19.64■□□□□ 0.73
HMGN3-203ENST00000620514 SLC9A7Q96T83 725 aa19.64■□□□□ 0.73
HMGN3-203ENST00000620514 MXRA8Q9BRK3 442 aa19.64■□□□□ 0.73
HMGN3-203ENST00000620514 ZNF215Q9UL58 517 aaPredicted RBP19.64■□□□□ 0.73
HMGN3-203ENST00000620514 NID2Q14112 1375 aa19.64■□□□□ 0.73
HMGN3-203ENST00000620514 CCDC196A0A1B0GTZ2 297 aa19.63■□□□□ 0.73
HMGN3-203ENST00000620514 BAIAP3O94812 1187 aa19.63■□□□□ 0.73
HMGN3-203ENST00000620514 PARNO95453 639 aaKnown RBP19.63■□□□□ 0.73
HMGN3-203ENST00000620514 FOSP01100 380 aaPredicted RBP19.63■□□□□ 0.73
HMGN3-203ENST00000620514 SCG2P13521 617 aa19.63■□□□□ 0.73
HMGN3-203ENST00000620514 CLK2P49760 499 aaKnown RBP19.63■□□□□ 0.73
HMGN3-203ENST00000620514 PKN1Q16512 942 aa19.63■□□□□ 0.73
HMGN3-203ENST00000620514 PPP2R2DQ66LE6 453 aa19.63■□□□□ 0.73
HMGN3-203ENST00000620514 CNKSR3Q6P9H4 555 aa19.63■□□□□ 0.73
HMGN3-203ENST00000620514 TMCO2Q7Z6W1 182 aaPredicted RBP19.63■□□□□ 0.73
HMGN3-203ENST00000620514 PHOSPHO2Q8TCD6 241 aa19.63■□□□□ 0.73
HMGN3-203ENST00000620514 SEPT1Q8WYJ6 367 aa19.63■□□□□ 0.73
HMGN3-203ENST00000620514 PHKBQ93100 1093 aa19.63■□□□□ 0.73
HMGN3-203ENST00000620514 CHD9Q3L8U1 2897 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms