RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 SLC7A14Q8TBB6 771 aa7.55□□□□□ -1.2
SCAMP1-205ENST00000614488 FBXW5Q969U6 566 aa7.55□□□□□ -1.2
SCAMP1-205ENST00000614488 GORASP1Q9BQQ3 440 aa7.55□□□□□ -1.2
SCAMP1-205ENST00000614488 TMEM260Q9NX78 707 aa7.55□□□□□ -1.2
SCAMP1-205ENST00000614488 DSEQ9UL01 958 aa7.55□□□□□ -1.2
SCAMP1-205ENST00000614488 PCDHA9Q9Y5H5 950 aa7.55□□□□□ -1.2
SCAMP1-205ENST00000614488 SH3D21A4FU49 640 aa7.54□□□□□ -1.2
SCAMP1-205ENST00000614488 SLC27A2O14975 620 aa7.54□□□□□ -1.2
SCAMP1-205ENST00000614488 GSTA4O15217 222 aa7.54□□□□□ -1.2
SCAMP1-205ENST00000614488 STAT5AP42229 794 aa7.54□□□□□ -1.2
SCAMP1-205ENST00000614488 EPHA5P54756 1037 aa7.54□□□□□ -1.2
SCAMP1-205ENST00000614488 FAM47CQ5HY64 1035 aa7.54□□□□□ -1.2
SCAMP1-205ENST00000614488 C16orf59Q7L2K0 433 aa7.54□□□□□ -1.2
SCAMP1-205ENST00000614488 FAM26EQ8N5C1 309 aa7.54□□□□□ -1.2
SCAMP1-205ENST00000614488 MAGEB10Q96LZ2 347 aaPredicted RBP7.54□□□□□ -1.2
SCAMP1-205ENST00000614488 NOX5Q96PH1 765 aa7.54□□□□□ -1.2
SCAMP1-205ENST00000614488 FFAR3O14843 346 aa7.53□□□□□ -1.2
SCAMP1-205ENST00000614488 NKRFO15226 690 aaKnown RBP eCLIP7.53□□□□□ -1.2
SCAMP1-205ENST00000614488 ITGA1P56199 1179 aa7.53□□□□□ -1.2
SCAMP1-205ENST00000614488 DLX2Q07687 328 aaPredicted RBP7.53□□□□□ -1.2
SCAMP1-205ENST00000614488 TUSC3Q13454 348 aa7.53□□□□□ -1.2
SCAMP1-205ENST00000614488 GPR19Q15760 415 aa7.53□□□□□ -1.2
SCAMP1-205ENST00000614488 FNDC3BQ53EP0 1204 aaKnown RBP7.53□□□□□ -1.2
SCAMP1-205ENST00000614488 TEPPQ6URK8 271 aa7.53□□□□□ -1.2
SCAMP1-205ENST00000614488 BRAPQ7Z569 592 aa7.53□□□□□ -1.2
SCAMP1-205ENST00000614488 ZC3H7AQ8IWR0 971 aaKnown RBP7.53□□□□□ -1.2
SCAMP1-205ENST00000614488 KYQ8NBH2 561 aa7.53□□□□□ -1.2
SCAMP1-205ENST00000614488 C11orf84Q9BUA3 381 aaPredicted RBP7.53□□□□□ -1.2
SCAMP1-205ENST00000614488 TRIM39Q9HCM9 518 aa7.53□□□□□ -1.2
SCAMP1-205ENST00000614488 LRG1P02750 347 aa7.52□□□□□ -1.21
SCAMP1-205ENST00000614488 ST5P78524 1137 aa7.52□□□□□ -1.21
SCAMP1-205ENST00000614488 KCTD1Q719H9 257 aa7.52□□□□□ -1.21
SCAMP1-205ENST00000614488 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.52□□□□□ -1.21
SCAMP1-205ENST00000614488 SYNPOQ8N3V7 929 aa7.52□□□□□ -1.21
SCAMP1-205ENST00000614488 TTLL6Q8N841 843 aa7.52□□□□□ -1.21
SCAMP1-205ENST00000614488 TP53I13Q8NBR0 393 aaPredicted RBP7.52□□□□□ -1.21
SCAMP1-205ENST00000614488 ZBTB8AQ96BR9 441 aa7.52□□□□□ -1.21
SCAMP1-205ENST00000614488 SCLYQ96I15 445 aa7.52□□□□□ -1.21
SCAMP1-205ENST00000614488 RNPC3Q96LT9 517 aaKnown RBP7.52□□□□□ -1.21
SCAMP1-205ENST00000614488 KANSL2Q9H9L4 492 aa7.52□□□□□ -1.21
SCAMP1-205ENST00000614488 RASGRP1O95267 797 aa7.51□□□□□ -1.21
SCAMP1-205ENST00000614488 PYGMP11217 842 aa7.51□□□□□ -1.21
SCAMP1-205ENST00000614488 FIGNQ5HY92 759 aa7.51□□□□□ -1.21
SCAMP1-205ENST00000614488 LIPIQ6XZB0 460 aa7.51□□□□□ -1.21
SCAMP1-205ENST00000614488 SP8Q8IXZ3 490 aa7.51□□□□□ -1.21
SCAMP1-205ENST00000614488 NLGN4XQ8N0W4 816 aa7.51□□□□□ -1.21
SCAMP1-205ENST00000614488 SH3RF2Q8TEC5 729 aa7.51□□□□□ -1.21
SCAMP1-205ENST00000614488 CLEC4DQ8WXI8 215 aa7.51□□□□□ -1.21
SCAMP1-205ENST00000614488 CELF4Q9BZC1 486 aaKnown RBP7.51□□□□□ -1.21
SCAMP1-205ENST00000614488 LUC7LQ9NQ29 371 aaKnown RBP7.51□□□□□ -1.21
SCAMP1-205ENST00000614488 CATSPERZQ9NTU4 200 aa7.51□□□□□ -1.21
SCAMP1-205ENST00000614488 USP35Q9P2H5 1018 aa7.51□□□□□ -1.21
SCAMP1-205ENST00000614488 SRPK3Q9UPE1 567 aa7.51□□□□□ -1.21
SCAMP1-205ENST00000614488 ADAMTS20P59510 1910 aa7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 TCRBV5S4A2TA0A5A2 114 aa7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 TCRBV16S1A1N1A0A5B0 115 aa7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 CCDC66A2RUB6 948 aa7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 SMARCA5O60264 1052 aaPredicted RBP7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 TRIM13O60858 407 aa7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 NPTXRO95502 500 aa7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 SRGAP2CP0DJJ0 459 aa7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 THBS2P35442 1172 aa7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 CRY1Q16526 586 aa7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 PAN2Q504Q3 1202 aaKnown RBP7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 FBLN7Q53RD9 439 aa7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 MARCH10Q8NA82 808 aaPredicted RBP7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 KCNC2Q96PR1 638 aa7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 WRNIP1Q96S55 665 aa7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 TMEM209Q96SK2 561 aa7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 SPATA6Q9NWH7 488 aaPredicted RBP7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 NTMQ9P121 344 aa7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 CBLCQ9ULV8 474 aa7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 TELO2Q9Y4R8 837 aa7.5□□□□□ -1.21
SCAMP1-205ENST00000614488 ZNF561-AS1K7EIQ3 104 aa7.49□□□□□ -1.21
SCAMP1-205ENST00000614488 LTFP02788 710 aa7.49□□□□□ -1.21
SCAMP1-205ENST00000614488 CKMP06732 381 aa7.49□□□□□ -1.21
SCAMP1-205ENST00000614488 PDE6AP16499 860 aa7.49□□□□□ -1.21
SCAMP1-205ENST00000614488 FAHP16930 419 aa7.49□□□□□ -1.21
SCAMP1-205ENST00000614488 LACTBP83111 547 aaPredicted RBP7.49□□□□□ -1.21
SCAMP1-205ENST00000614488 GRIN1Q05586 938 aa7.49□□□□□ -1.21
SCAMP1-205ENST00000614488 ADAM9Q13443 819 aa7.49□□□□□ -1.21
SCAMP1-205ENST00000614488 VMACQ2NL98 169 aa7.49□□□□□ -1.21
SCAMP1-205ENST00000614488 ARHGAP36Q6ZRI8 547 aa7.49□□□□□ -1.21
SCAMP1-205ENST00000614488 TTLL7Q6ZT98 887 aa7.49□□□□□ -1.21
SCAMP1-205ENST00000614488 HOMER1Q86YM7 354 aa7.49□□□□□ -1.21
SCAMP1-205ENST00000614488 ZNF526Q8TF50 670 aaPredicted RBP7.49□□□□□ -1.21
SCAMP1-205ENST00000614488 ESYT3A0FGR9 886 aa7.48□□□□□ -1.21
SCAMP1-205ENST00000614488 MAN2B1O00754 1011 aa7.48□□□□□ -1.21
SCAMP1-205ENST00000614488 RFPL3O75679 317 aa7.48□□□□□ -1.21
SCAMP1-205ENST00000614488 RAPGEF3O95398 923 aa7.48□□□□□ -1.21
SCAMP1-205ENST00000614488 AMY2AP04746 511 aa7.48□□□□□ -1.21
SCAMP1-205ENST00000614488 AMY2BP19961 511 aa7.48□□□□□ -1.21
SCAMP1-205ENST00000614488 GJA4P35212 333 aa7.48□□□□□ -1.21
SCAMP1-205ENST00000614488 DNM2P50570 870 aa7.48□□□□□ -1.21
SCAMP1-205ENST00000614488 SMAD4Q13485 552 aaKnown RBP7.48□□□□□ -1.21
SCAMP1-205ENST00000614488 LCE1DQ5T752 114 aa7.48□□□□□ -1.21
SCAMP1-205ENST00000614488 FGD2Q7Z6J4 655 aa7.48□□□□□ -1.21
SCAMP1-205ENST00000614488 RBM12BQ8IXT5 1001 aaKnown RBP7.48□□□□□ -1.21
SCAMP1-205ENST00000614488 CARFQ8N187 725 aa7.48□□□□□ -1.21
SCAMP1-205ENST00000614488 SYT3Q9BQG1 590 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms