RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ZNF572Q7Z3I7 529 aaPredicted RBP22.35■■□□□ 1.17
SHKBP1-225ENST00000600733 A0A0U1RQG5 324 aaPredicted RBP22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 MAPK8IP2Q13387 824 aaPredicted RBP22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 FAM83BQ5T0W9 1011 aa22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 GPATCH4Q5T3I0 446 aaKnown RBP22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 CCDC70Q6NSX1 233 aa22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 FOXR2Q6PJQ5 311 aa22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 AENQ8WTP8 325 aaKnown RBP22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 BMP2KQ9NSY1 1161 aaPredicted RBP22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 SWAP70Q9UH65 585 aa22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 ATF5Q9Y2D1 282 aaPredicted RBP22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 PCDHA2Q9Y5H9 948 aa22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 LTBP1Q14766 1721 aa22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 UBR3Q6ZT12 1888 aa22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 SSU72P8A0A1W2PR75 194 aa22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 AGPSO00116 658 aa22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 PLA2G4BP0C869 781 aa22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 TCP1P17987 556 aaKnown RBP22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 POLR2FP61218 127 aaKnown RBP22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 SEPT2Q15019 361 aa22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 FOXR1Q6PIV2 292 aa22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 LSM14BQ9BX40 385 aaKnown RBP22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 TLR10Q9BXR5 811 aa22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 CEP72Q9P209 647 aa22.34■■□□□ 1.17
SHKBP1-225ENST00000600733 TOM1O60784 492 aa22.33■■□□□ 1.17
SHKBP1-225ENST00000600733 GCFC2P16383 781 aaKnown RBP22.33■■□□□ 1.17
SHKBP1-225ENST00000600733 NAP1L1P55209 391 aaKnown RBP22.33■■□□□ 1.17
SHKBP1-225ENST00000600733 HYIQ5T013 277 aa22.33■■□□□ 1.17
SHKBP1-225ENST00000600733 CCDC181Q5TID7 509 aa22.33■■□□□ 1.17
SHKBP1-225ENST00000600733 GPBP1Q86WP2 473 aa22.33■■□□□ 1.17
SHKBP1-225ENST00000600733 CRAMP1Q96RY5 1269 aa22.33■■□□□ 1.17
SHKBP1-225ENST00000600733 EDEM3Q9BZQ6 932 aa22.33■■□□□ 1.17
SHKBP1-225ENST00000600733 NT5C3AQ9H0P0 336 aa22.33■■□□□ 1.17
SHKBP1-225ENST00000600733 CWC15Q9P013 229 aaKnown RBP22.33■■□□□ 1.17
SHKBP1-225ENST00000600733 FAM184BQ9ULE4 1060 aa22.33■■□□□ 1.17
SHKBP1-225ENST00000600733 PPEF1O14829 653 aaPredicted RBP22.33■■□□□ 1.16
SHKBP1-225ENST00000600733 STAT3P40763 770 aa22.33■■□□□ 1.16
SHKBP1-225ENST00000600733 ITIH3Q06033 890 aa22.33■■□□□ 1.16
SHKBP1-225ENST00000600733 NFIAQ12857 509 aa22.33■■□□□ 1.16
SHKBP1-225ENST00000600733 SHROOM1Q2M3G4 852 aaPredicted RBP22.33■■□□□ 1.16
SHKBP1-225ENST00000600733 HERC4Q5GLZ8 1057 aaPredicted RBP22.33■■□□□ 1.16
SHKBP1-225ENST00000600733 KLHDC7AQ5VTJ3 777 aa22.33■■□□□ 1.16
SHKBP1-225ENST00000600733 SFMBT2Q5VUG0 894 aa22.33■■□□□ 1.16
SHKBP1-225ENST00000600733 AFAP1L1Q8TED9 768 aa22.33■■□□□ 1.16
SHKBP1-225ENST00000600733 SCFD1Q8WVM8 642 aa22.33■■□□□ 1.16
SHKBP1-225ENST00000600733 NOX5Q96PH1 765 aa22.33■■□□□ 1.16
SHKBP1-225ENST00000600733 LCMT1Q9UIC8 334 aa22.33■■□□□ 1.16
SHKBP1-225ENST00000600733 KDM3AQ9Y4C1 1321 aa22.33■■□□□ 1.16
SHKBP1-225ENST00000600733 SLC9C1Q4G0N8 1177 aa22.32■■□□□ 1.16
SHKBP1-225ENST00000600733 CDC42EP5Q6NZY7 148 aa22.32■■□□□ 1.16
SHKBP1-225ENST00000600733 CCDC65Q8IXS2 484 aa22.32■■□□□ 1.16
SHKBP1-225ENST00000600733 ZFP91Q96JP5 570 aaPredicted RBP22.32■■□□□ 1.16
SHKBP1-225ENST00000600733 COA1Q9GZY4 146 aa22.32■■□□□ 1.16
SHKBP1-225ENST00000600733 GOLGB1Q14789 3259 aaKnown RBP22.32■■□□□ 1.16
SHKBP1-225ENST00000600733 HOXA7P31268 230 aaPredicted RBP22.32■■□□□ 1.16
SHKBP1-225ENST00000600733 ARID5AQ03989 594 aa22.32■■□□□ 1.16
SHKBP1-225ENST00000600733 DOK7Q18PE1 504 aa22.32■■□□□ 1.16
SHKBP1-225ENST00000600733 TRIM59Q8IWR1 403 aa22.32■■□□□ 1.16
SHKBP1-225ENST00000600733 GOLGA6L1Q8N7Z2 621 aa22.32■■□□□ 1.16
SHKBP1-225ENST00000600733 MS4A14Q96JA4 679 aa22.32■■□□□ 1.16
SHKBP1-225ENST00000600733 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.32■■□□□ 1.16
SHKBP1-225ENST00000600733 FAM196BA6NMK8 535 aa22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 RBAK-RBAKDNI3L0D1 243 aa22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 CYP11B2P19099 503 aa22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 QRICH1Q2TAL8 776 aa22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 SND1Q7KZF4 910 aaKnown RBP eCLIP22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 ZFPM1Q8IX07 1006 aa22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 CEP63Q96MT8 703 aa22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 KCTD10Q9H3F6 313 aa22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 ZHX3Q9H4I2 956 aa22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 MED24O75448 989 aa22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 SERPING1P05155 500 aa22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 ENOX2Q16206 610 aaKnown RBP22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 HAUS3Q68CZ6 603 aa22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 KCNMB3Q9NPA1 279 aa22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 RBM12Q9NTZ6 932 aaKnown RBP22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 PCDHA1Q9Y5I3 950 aa22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 MYO3BQ8WXR4 1341 aa22.31■■□□□ 1.16
SHKBP1-225ENST00000600733 LRRC37AA6NMS7 1700 aa22.3■■□□□ 1.16
SHKBP1-225ENST00000600733 POTEFA5A3E0 1075 aa22.3■■□□□ 1.16
SHKBP1-225ENST00000600733 GOLGA6BA6NDN3 693 aa22.3■■□□□ 1.16
SHKBP1-225ENST00000600733 POTEIP0CG38 1075 aa22.3■■□□□ 1.16
SHKBP1-225ENST00000600733 DNA2P51530 1060 aa22.3■■□□□ 1.16
SHKBP1-225ENST00000600733 POTEGQ6S5H5 508 aa22.3■■□□□ 1.16
SHKBP1-225ENST00000600733 POTEEQ6S8J3 1075 aa22.3■■□□□ 1.16
SHKBP1-225ENST00000600733 SP8Q8IXZ3 490 aa22.3■■□□□ 1.16
SHKBP1-225ENST00000600733 TRIM34Q9BYJ4 488 aa22.3■■□□□ 1.16
SHKBP1-225ENST00000600733 EMILIN3Q9NT22 766 aa22.3■■□□□ 1.16
SHKBP1-225ENST00000600733 SUGT1Q9Y2Z0 365 aa22.3■■□□□ 1.16
SHKBP1-225ENST00000600733 POLRMTO00411 1230 aaKnown RBP22.29■■□□□ 1.16
SHKBP1-225ENST00000600733 RPS6KA5O75582 802 aa22.29■■□□□ 1.16
SHKBP1-225ENST00000600733 RAPGEF1Q13905 1077 aa22.29■■□□□ 1.16
SHKBP1-225ENST00000600733 ARSHQ5FYA8 562 aa22.29■■□□□ 1.16
SHKBP1-225ENST00000600733 LRRC31Q6UY01 552 aa22.29■■□□□ 1.16
SHKBP1-225ENST00000600733 TBC1D5Q92609 795 aa22.29■■□□□ 1.16
SHKBP1-225ENST00000600733 ANO3Q9BYT9 981 aa22.29■■□□□ 1.16
SHKBP1-225ENST00000600733 GREB1LQ9C091 1923 aaPredicted RBP22.29■■□□□ 1.16
SHKBP1-225ENST00000600733 ZC3H12CQ9C0D7 883 aaKnown RBP22.29■■□□□ 1.16
SHKBP1-225ENST00000600733 DNAJC18Q9H819 358 aa22.29■■□□□ 1.16
SHKBP1-225ENST00000600733 ATP6V0A2Q9Y487 856 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms