RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 KCNA2P16389 499 aa22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 GJB2P29033 226 aa22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 CIITAP33076 1130 aa22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 SETQ01105 290 aaPredicted RBP22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 NR5A1Q13285 461 aa22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 DGKDQ16760 1214 aa22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 INF2Q27J81 1249 aa22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 LRRC26Q2I0M4 334 aa22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 METTL7BQ6UX53 244 aa22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 PIK3AP1Q6ZUJ8 805 aa22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 MTG1Q9BT17 334 aaPredicted RBP22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 TRIOBPQ9H2D6 2365 aa22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 BTBD18B2RXH4 712 aa22.34■■□□□ 1.17
SHKBP1-214ENST00000597396 EVI5O60447 810 aa22.34■■□□□ 1.17
SHKBP1-214ENST00000597396 RTP1P59025 263 aa22.34■■□□□ 1.17
SHKBP1-214ENST00000597396 PURAQ00577 322 aaKnown RBP22.34■■□□□ 1.17
SHKBP1-214ENST00000597396 SP4Q02446 784 aa22.34■■□□□ 1.17
SHKBP1-214ENST00000597396 CUL4AQ13619 759 aa22.34■■□□□ 1.17
SHKBP1-214ENST00000597396 PRR16Q569H4 304 aa22.34■■□□□ 1.17
SHKBP1-214ENST00000597396 HSCBQ8IWL3 235 aa22.34■■□□□ 1.17
SHKBP1-214ENST00000597396 FBXO18Q8NFZ0 1043 aa22.34■■□□□ 1.17
SHKBP1-214ENST00000597396 SNX21Q969T3 373 aa22.34■■□□□ 1.17
SHKBP1-214ENST00000597396 SDF4Q9BRK5 362 aa22.34■■□□□ 1.17
SHKBP1-214ENST00000597396 BCAS3Q9H6U6 928 aa22.34■■□□□ 1.17
SHKBP1-214ENST00000597396 KAT6AQ92794 2004 aa22.33■■□□□ 1.17
SHKBP1-214ENST00000597396 IGLV3-22A0A075B6J6 115 aa22.33■■□□□ 1.17
SHKBP1-214ENST00000597396 A0A0U1RQG5 324 aaPredicted RBP22.33■■□□□ 1.17
SHKBP1-214ENST00000597396 GNL2Q13823 731 aaKnown RBP22.33■■□□□ 1.17
SHKBP1-214ENST00000597396 HSDL1Q3SXM5 330 aa22.33■■□□□ 1.17
SHKBP1-214ENST00000597396 NEK8Q86SG6 692 aa22.33■■□□□ 1.17
SHKBP1-214ENST00000597396 AGO4Q9HCK5 861 aaKnown RBP22.33■■□□□ 1.17
SHKBP1-214ENST00000597396 ATP11BQ9Y2G3 1177 aa22.33■■□□□ 1.17
SHKBP1-214ENST00000597396 WDR81Q562E7 1941 aa22.32■■□□□ 1.16
SHKBP1-214ENST00000597396 LETM2Q2VYF4 491 aa22.32■■□□□ 1.16
SHKBP1-214ENST00000597396 TNFRSF25Q93038 417 aa22.32■■□□□ 1.16
SHKBP1-214ENST00000597396 MYH9P35579 1960 aaKnown RBP22.32■■□□□ 1.16
SHKBP1-214ENST00000597396 NFASCO94856 1347 aa22.31■■□□□ 1.16
SHKBP1-214ENST00000597396 EDIL3O43854 480 aa22.31■■□□□ 1.16
SHKBP1-214ENST00000597396 PPFIA4O75335 1185 aa22.31■■□□□ 1.16
SHKBP1-214ENST00000597396 TDP2O95551 362 aa22.31■■□□□ 1.16
SHKBP1-214ENST00000597396 CHMP4BP1P59074 171 aa22.31■■□□□ 1.16
SHKBP1-214ENST00000597396 PSMC6P62333 389 aa22.31■■□□□ 1.16
SHKBP1-214ENST00000597396 SNX17Q15036 470 aa22.31■■□□□ 1.16
SHKBP1-214ENST00000597396 TRIM60Q495X7 471 aa22.31■■□□□ 1.16
SHKBP1-214ENST00000597396 MOXD1Q6UVY6 613 aa22.31■■□□□ 1.16
SHKBP1-214ENST00000597396 C7orf61Q8IZ16 206 aa22.31■■□□□ 1.16
SHKBP1-214ENST00000597396 ZNF577Q9BSK1 485 aa22.31■■□□□ 1.16
SHKBP1-214ENST00000597396 JPH1Q9HDC5 661 aaPredicted RBP22.31■■□□□ 1.16
SHKBP1-214ENST00000597396 FAM205CA6NFA0 338 aa22.3■■□□□ 1.16
SHKBP1-214ENST00000597396 ARVCFO00192 962 aa22.3■■□□□ 1.16
SHKBP1-214ENST00000597396 ZNF286BP0CG31 522 aa22.3■■□□□ 1.16
SHKBP1-214ENST00000597396 ITGA7Q13683 1181 aa22.3■■□□□ 1.16
SHKBP1-214ENST00000597396 EARS2Q5JPH6 523 aaKnown RBP22.3■■□□□ 1.16
SHKBP1-214ENST00000597396 C1orf53Q5VUE5 145 aa22.3■■□□□ 1.16
SHKBP1-214ENST00000597396 UIMC1Q96RL1 719 aa22.3■■□□□ 1.16
SHKBP1-214ENST00000597396 GPR20Q99678 358 aa22.3■■□□□ 1.16
SHKBP1-214ENST00000597396 NAP1L4Q99733 375 aaKnown RBP22.3■■□□□ 1.16
SHKBP1-214ENST00000597396 SLC9A2Q9UBY0 812 aa22.3■■□□□ 1.16
SHKBP1-214ENST00000597396 TCEAL9Q9UHQ7 104 aa22.3■■□□□ 1.16
SHKBP1-214ENST00000597396 MROH7Q68CQ1 1323 aa22.3■■□□□ 1.16
SHKBP1-214ENST00000597396 CYP3A7-CYP3A51PA0A087WV96 503 aa22.29■■□□□ 1.16
SHKBP1-214ENST00000597396 H3BQV1 296 aa22.29■■□□□ 1.16
SHKBP1-214ENST00000597396 DDX39AO00148 427 aaKnown RBP22.29■■□□□ 1.16
SHKBP1-214ENST00000597396 IPO5O00410 1097 aaKnown RBP22.29■■□□□ 1.16
SHKBP1-214ENST00000597396 HOXD8P13378 290 aaPredicted RBP22.29■■□□□ 1.16
SHKBP1-214ENST00000597396 GCFC2P16383 781 aaKnown RBP22.29■■□□□ 1.16
SHKBP1-214ENST00000597396 CYP3A7P24462 503 aa22.29■■□□□ 1.16
SHKBP1-214ENST00000597396 ITGB3BPQ13352 177 aaPredicted RBP22.29■■□□□ 1.16
SHKBP1-214ENST00000597396 Q4G0T1 1027 aa22.29■■□□□ 1.16
SHKBP1-214ENST00000597396 LENG9Q96B70 501 aa22.29■■□□□ 1.16
SHKBP1-214ENST00000597396 KATNAL1Q9BW62 490 aa22.29■■□□□ 1.16
SHKBP1-214ENST00000597396 FOXP1Q9H334 677 aaPredicted RBP22.29■■□□□ 1.16
SHKBP1-214ENST00000597396 DDX25Q9UHL0 483 aaKnown RBP22.29■■□□□ 1.16
SHKBP1-214ENST00000597396 CCNT1O60563 726 aaKnown RBP22.28■■□□□ 1.16
SHKBP1-214ENST00000597396 PQBP1O60828 265 aaKnown RBP22.28■■□□□ 1.16
SHKBP1-214ENST00000597396 TLE2Q04725 743 aa22.28■■□□□ 1.16
SHKBP1-214ENST00000597396 UTP14CQ5TAP6 766 aaKnown RBP22.28■■□□□ 1.16
SHKBP1-214ENST00000597396 SEPT1Q8WYJ6 367 aa22.28■■□□□ 1.16
SHKBP1-214ENST00000597396 SEZ6LQ9BYH1 1024 aa22.28■■□□□ 1.16
SHKBP1-214ENST00000597396 TBC1D22BQ9NU19 505 aa22.28■■□□□ 1.16
SHKBP1-214ENST00000597396 TRIP12Q14669 1992 aaPredicted RBP22.28■■□□□ 1.16
SHKBP1-214ENST00000597396 MSH4O15457 936 aa22.27■■□□□ 1.16
SHKBP1-214ENST00000597396 LGALS2P05162 132 aa22.27■■□□□ 1.16
SHKBP1-214ENST00000597396 TCF7P36402 384 aaPredicted RBP22.27■■□□□ 1.16
SHKBP1-214ENST00000597396 PSEN2P49810 448 aa22.27■■□□□ 1.16
SHKBP1-214ENST00000597396 NBPF20Q3BBV1 942 aa22.27■■□□□ 1.16
SHKBP1-214ENST00000597396 FAM47CQ5HY64 1035 aa22.27■■□□□ 1.16
SHKBP1-214ENST00000597396 LARP1BQ659C4 914 aaKnown RBP22.27■■□□□ 1.16
SHKBP1-214ENST00000597396 INTS4Q96HW7 963 aaKnown RBP22.27■■□□□ 1.16
SHKBP1-214ENST00000597396 MBOAT7Q96N66 472 aa22.27■■□□□ 1.16
SHKBP1-214ENST00000597396 FOXD4L1Q9NU39 408 aa22.27■■□□□ 1.16
SHKBP1-214ENST00000597396 TELO2Q9Y4R8 837 aa22.27■■□□□ 1.16
SHKBP1-214ENST00000597396 GRIN2DO15399 1336 aa22.27■■□□□ 1.16
SHKBP1-214ENST00000597396 DCDC2CA8MYV0 355 aa22.26■■□□□ 1.15
SHKBP1-214ENST00000597396 TLR3O15455 904 aaKnown RBP22.26■■□□□ 1.15
SHKBP1-214ENST00000597396 F2P00734 622 aa22.26■■□□□ 1.15
SHKBP1-214ENST00000597396 CDK7P50613 346 aa22.26■■□□□ 1.15
SHKBP1-214ENST00000597396 MFSD10Q14728 455 aa22.26■■□□□ 1.15
SHKBP1-214ENST00000597396 MCTP1Q6DN14 999 aa22.26■■□□□ 1.15
SHKBP1-214ENST00000597396 PPP4R3AQ6IN85 833 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms