RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 TUT1Q9H6E5 874 aaKnown RBP12.06□□□□□ -0.48
CCDC9-203ENST00000596938 JADE2Q9NQC1 790 aa12.06□□□□□ -0.48
CCDC9-203ENST00000596938 NAP1L2Q9ULW6 460 aaPredicted RBP12.06□□□□□ -0.48
CCDC9-203ENST00000596938 BAZ2BQ9UIF8 2168 aaKnown RBP12.06□□□□□ -0.48
CCDC9-203ENST00000596938 NID2Q14112 1375 aa12.05□□□□□ -0.48
CCDC9-203ENST00000596938 PRPF3O43395 683 aaKnown RBP12.05□□□□□ -0.48
CCDC9-203ENST00000596938 PARNO95453 639 aaKnown RBP12.05□□□□□ -0.48
CCDC9-203ENST00000596938 PDIA3P30101 505 aaKnown RBP12.05□□□□□ -0.48
CCDC9-203ENST00000596938 CLK2P49760 499 aaKnown RBP12.05□□□□□ -0.48
CCDC9-203ENST00000596938 ADCY7P51828 1080 aa12.05□□□□□ -0.48
CCDC9-203ENST00000596938 PTK7Q13308 1070 aa12.05□□□□□ -0.48
CCDC9-203ENST00000596938 MCTP2Q6DN12 878 aa12.05□□□□□ -0.48
CCDC9-203ENST00000596938 OTOP2Q7RTS6 562 aa12.05□□□□□ -0.48
CCDC9-203ENST00000596938 AFAP1L1Q8TED9 768 aa12.05□□□□□ -0.48
CCDC9-203ENST00000596938 GUCD1Q96NT3 240 aa12.05□□□□□ -0.48
CCDC9-203ENST00000596938 TTYH1Q9H313 450 aaPredicted RBP12.05□□□□□ -0.48
CCDC9-203ENST00000596938 CXXC1Q9P0U4 656 aaPredicted RBP12.05□□□□□ -0.48
CCDC9-203ENST00000596938 CYP46A1Q9Y6A2 500 aa12.05□□□□□ -0.48
CCDC9-203ENST00000596938 A0A0C4DFX4 3053 aa12.05□□□□□ -0.48
CCDC9-203ENST00000596938 ESYT2A0FGR8 921 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 ATP9AO75110 1047 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 LGALS2P05162 132 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 SCG2P13521 617 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 SELPP16109 830 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 KCNA2P16389 499 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 IFNAR1P17181 557 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 DNAJB2P25686 324 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 HOXC8P31273 242 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 AP3B2Q13367 1082 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 MTMR1Q13613 665 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 NTRK3Q16288 839 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 PKN1Q16512 942 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 SEPT1Q8WYJ6 367 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 DHX38Q92620 1227 aaKnown RBP12.04□□□□□ -0.48
CCDC9-203ENST00000596938 ZNF274Q96GC6 653 aaPredicted RBP12.04□□□□□ -0.48
CCDC9-203ENST00000596938 MXRA8Q9BRK3 442 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 ZMYND12Q9H0C1 365 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 SLC4A7Q9Y6M7 1214 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 SCN10AQ9Y5Y9 1956 aa12.04□□□□□ -0.48
CCDC9-203ENST00000596938 MEIS1O00470 390 aa12.03□□□□□ -0.48
CCDC9-203ENST00000596938 GNAT1P11488 350 aa12.03□□□□□ -0.48
CCDC9-203ENST00000596938 CKBP12277 381 aa12.03□□□□□ -0.48
CCDC9-203ENST00000596938 ACTN1P12814 892 aa12.03□□□□□ -0.48
CCDC9-203ENST00000596938 SREBF1P36956 1147 aa12.03□□□□□ -0.48
CCDC9-203ENST00000596938 ZNF200P98182 395 aaPredicted RBP12.03□□□□□ -0.48
CCDC9-203ENST00000596938 AKAP17AQ02040 695 aaKnown RBP12.03□□□□□ -0.48
CCDC9-203ENST00000596938 TOB2Q14106 344 aaPredicted RBP12.03□□□□□ -0.48
CCDC9-203ENST00000596938 HIC1Q14526 733 aa12.03□□□□□ -0.48
CCDC9-203ENST00000596938 GPNMBQ14956 572 aa12.03□□□□□ -0.48
CCDC9-203ENST00000596938 TRIM71Q2Q1W2 868 aaKnown RBP12.03□□□□□ -0.48
CCDC9-203ENST00000596938 DEFB128Q7Z7B8 93 aa12.03□□□□□ -0.48
CCDC9-203ENST00000596938 SERINC5Q86VE9 423 aa12.03□□□□□ -0.48
CCDC9-203ENST00000596938 CCDC12Q8WUD4 166 aaPredicted RBP12.03□□□□□ -0.48
CCDC9-203ENST00000596938 TIFAQ96CG3 184 aa12.03□□□□□ -0.48
CCDC9-203ENST00000596938 FAM161BQ96MY7 647 aa12.03□□□□□ -0.48
CCDC9-203ENST00000596938 CDX2Q99626 313 aaPredicted RBP12.03□□□□□ -0.48
CCDC9-203ENST00000596938 RNF26Q9BY78 433 aaPredicted RBP12.03□□□□□ -0.48
CCDC9-203ENST00000596938 PBX4Q9BYU1 374 aa12.03□□□□□ -0.48
CCDC9-203ENST00000596938 RNPEPQ9H4A4 650 aa12.03□□□□□ -0.48
CCDC9-203ENST00000596938 KCNH7Q9NS40 1196 aa12.03□□□□□ -0.48
CCDC9-203ENST00000596938 GSTTP1A0A1W2PQM5 241 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 C17orf102A2RUQ5 167 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 GRXCR1A8MXD5 290 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 EIF5BO60841 1220 aaKnown RBP12.02□□□□□ -0.49
CCDC9-203ENST00000596938 CXCL10P02778 98 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 SMIM10L2AP0DMW4 78 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 SMIM10L2BP0DMW5 78 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 GNA11P29992 359 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 RAB30Q15771 203 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 CEP55Q53EZ4 464 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 LRRC8DQ7L1W4 858 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 NIPA1Q7RTP0 329 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 CYP2W1Q8TAV3 490 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 PHOSPHO2Q8TCD6 241 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 CRYGNQ8WXF5 182 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 ATP6V0A1Q93050 837 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 PHKBQ93100 1093 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 ANO3Q9BYT9 981 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 FTOQ9C0B1 505 aaKnown RBP eCLIP12.02□□□□□ -0.49
CCDC9-203ENST00000596938 ZNF576Q9H609 170 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 C6orf50Q9HD87 102 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 MSRAQ9UJ68 235 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 ZNF215Q9UL58 517 aaPredicted RBP12.02□□□□□ -0.49
CCDC9-203ENST00000596938 TELO2Q9Y4R8 837 aa12.02□□□□□ -0.49
CCDC9-203ENST00000596938 MYH6P13533 1939 aa12.01□□□□□ -0.49
CCDC9-203ENST00000596938 BAIAP3O94812 1187 aa12.01□□□□□ -0.49
CCDC9-203ENST00000596938 CYP3A4P08684 503 aa12.01□□□□□ -0.49
CCDC9-203ENST00000596938 ATP2A2P16615 1042 aaKnown RBP12.01□□□□□ -0.49
CCDC9-203ENST00000596938 TCF7P36402 384 aaPredicted RBP12.01□□□□□ -0.49
CCDC9-203ENST00000596938 PBX2P40425 430 aa12.01□□□□□ -0.49
CCDC9-203ENST00000596938 ANAPC15P60006 121 aa12.01□□□□□ -0.49
CCDC9-203ENST00000596938 CCT2P78371 535 aaKnown RBP12.01□□□□□ -0.49
CCDC9-203ENST00000596938 ADAM17P78536 824 aa12.01□□□□□ -0.49
CCDC9-203ENST00000596938 UTP14CQ5TAP6 766 aaKnown RBP12.01□□□□□ -0.49
CCDC9-203ENST00000596938 TRAF7Q6Q0C0 670 aa12.01□□□□□ -0.49
CCDC9-203ENST00000596938 BICD2Q8TD16 824 aa12.01□□□□□ -0.49
CCDC9-203ENST00000596938 UPF3BQ9BZI7 483 aaKnown RBP12.01□□□□□ -0.49
CCDC9-203ENST00000596938 SMARCAD1Q9H4L7 1026 aa12.01□□□□□ -0.49
CCDC9-203ENST00000596938 SH3GLB2Q9NR46 395 aa12.01□□□□□ -0.49
CCDC9-203ENST00000596938 PDRG1Q9NUG6 133 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms