RNA–Protein interactions for RNA: ENST00000592052.1

TMEM259-208, Transcript of transmembrane protein 259, human

Gene TMEM259, Length 1,637 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-208	ENST00000592052	SORBS3	O60504	671 aa		28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	BAG4	O95429	457 aa	Known RBP	28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	GJA9	P57773	515 aa		28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	CALCRL	Q16602	461 aa		28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	FAM173B	Q6P4H8	233 aa		28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	TNS4	Q8IZW8	715 aa		28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	U2AF1L4	Q8WU68	220 aa	Known RBP	28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	SLC5A5	Q92911	643 aa		28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	UPF3A	Q9H1J1	476 aa	Known RBP	28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	CIZ1	Q9ULV3	898 aa	Predicted RBP	28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	SGPL1	O95470	568 aa		28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	PGK1	P00558	417 aa		28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	C6orf222	P0C671	652 aa	Predicted RBP	28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	SLFN12	Q8IYM2	578 aa		28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	ABHD8	Q96I13	439 aa		28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	SPATA33	Q96N06	139 aa		28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	RIT2	Q99578	217 aa		28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	BCAS3	Q9H6U6	928 aa		28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	JPH1	Q9HDC5	661 aa	Predicted RBP	28.03	■■■□□ 2.08
TMEM259-208	ENST00000592052	FARP2	O94887	1054 aa	Predicted RBP	28.02	■■■□□ 2.08
TMEM259-208	ENST00000592052	LRCH2	Q5VUJ6	765 aa		28.02	■■■□□ 2.08
TMEM259-208	ENST00000592052	DHX15	O43143	795 aa	Known RBP	28.01	■■■□□ 2.07
TMEM259-208	ENST00000592052	GAS7	O60861	476 aa		28.01	■■■□□ 2.07
TMEM259-208	ENST00000592052	GJA8	P48165	433 aa		28.01	■■■□□ 2.07
TMEM259-208	ENST00000592052	BRDT	Q58F21	947 aa	Predicted RBP	28.01	■■■□□ 2.07
TMEM259-208	ENST00000592052	RNF180	Q86T96	592 aa		28.01	■■■□□ 2.07
TMEM259-208	ENST00000592052	ARRDC4	Q8NCT1	418 aa		28.01	■■■□□ 2.07
TMEM259-208	ENST00000592052	PPTC7	Q8NI37	304 aa		28.01	■■■□□ 2.07
TMEM259-208	ENST00000592052	HAS1	Q92839	578 aa		28.01	■■■□□ 2.07
TMEM259-208	ENST00000592052	GJA10	Q969M2	543 aa		28.01	■■■□□ 2.07
TMEM259-208	ENST00000592052	SLC9A2	Q9UBY0	812 aa		28.01	■■■□□ 2.07
TMEM259-208	ENST00000592052	TCEAL9	Q9UHQ7	104 aa		28.01	■■■□□ 2.07
TMEM259-208	ENST00000592052	OGDHL	Q9ULD0	1010 aa		28.01	■■■□□ 2.07
TMEM259-208	ENST00000592052	ADAMTS4	O75173	837 aa		28	■■■□□ 2.07
TMEM259-208	ENST00000592052	TFRC	P02786	760 aa	Known RBP	28	■■■□□ 2.07
TMEM259-208	ENST00000592052	MYCN	P04198	464 aa	Predicted RBP	28	■■■□□ 2.07
TMEM259-208	ENST00000592052	CPT1A	P50416	773 aa		28	■■■□□ 2.07
TMEM259-208	ENST00000592052	NKX3-2	P78367	333 aa		28	■■■□□ 2.07
TMEM259-208	ENST00000592052	FSCN1	Q16658	493 aa	Known RBP	28	■■■□□ 2.07
TMEM259-208	ENST00000592052	ZNF396	Q96N95	335 aa	Predicted RBP	28	■■■□□ 2.07
TMEM259-208	ENST00000592052	MTMR9	Q96QG7	549 aa		28	■■■□□ 2.07
TMEM259-208	ENST00000592052	CRISPLD2	Q9H0B8	497 aa		28	■■■□□ 2.07
TMEM259-208	ENST00000592052	TMEM60	Q9H2L4	133 aa		28	■■■□□ 2.07
TMEM259-208	ENST00000592052	POTEF	A5A3E0	1075 aa		28	■■■□□ 2.07
TMEM259-208	ENST00000592052	NOP56	O00567	594 aa	Known RBP	28	■■■□□ 2.07
TMEM259-208	ENST00000592052	PTGDR	Q13258	359 aa		28	■■■□□ 2.07
TMEM259-208	ENST00000592052	AFG1L	Q8WV93	481 aa		28	■■■□□ 2.07
TMEM259-208	ENST00000592052	TEKT3	Q9BXF9	490 aa		28	■■■□□ 2.07
TMEM259-208	ENST00000592052	CEP131	Q9UPN4	1083 aa		28	■■■□□ 2.07
TMEM259-208	ENST00000592052	ATP6V1D	Q9Y5K8	247 aa		28	■■■□□ 2.07
TMEM259-208	ENST00000592052	BRCA2	P51587	3418 aa		27.99	■■■□□ 2.07
TMEM259-208	ENST00000592052		A6NJR5	290 aa		27.99	■■■□□ 2.07
TMEM259-208	ENST00000592052	DDX39A	O00148	427 aa	Known RBP	27.99	■■■□□ 2.07
TMEM259-208	ENST00000592052	LAD1	O00515	517 aa		27.99	■■■□□ 2.07
TMEM259-208	ENST00000592052	PSMD10	O75832	226 aa		27.99	■■■□□ 2.07
TMEM259-208	ENST00000592052	BMP15	O95972	392 aa		27.99	■■■□□ 2.07
TMEM259-208	ENST00000592052	OR52Z1	P0C646	297 aa		27.99	■■■□□ 2.07
TMEM259-208	ENST00000592052	CAPN2	P17655	700 aa		27.99	■■■□□ 2.07
TMEM259-208	ENST00000592052	SP4	Q02446	784 aa		27.99	■■■□□ 2.07
TMEM259-208	ENST00000592052	HSDL1	Q3SXM5	330 aa		27.99	■■■□□ 2.07
TMEM259-208	ENST00000592052	GNAS	Q5JWF2	1037 aa		27.99	■■■□□ 2.07
TMEM259-208	ENST00000592052	C4orf32	Q8N8J7	132 aa		27.99	■■■□□ 2.07
TMEM259-208	ENST00000592052	CTAGE5	O15320	804 aa		27.98	■■■□□ 2.07
TMEM259-208	ENST00000592052	CST5	P28325	142 aa	Predicted RBP	27.98	■■■□□ 2.07
TMEM259-208	ENST00000592052	KRT76	Q01546	638 aa		27.98	■■■□□ 2.07
TMEM259-208	ENST00000592052	LRRC41	Q15345	812 aa		27.98	■■■□□ 2.07
TMEM259-208	ENST00000592052	SF3A1	Q15459	793 aa	Known RBP	27.98	■■■□□ 2.07
TMEM259-208	ENST00000592052	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	27.98	■■■□□ 2.07
TMEM259-208	ENST00000592052	FOXD4L3	Q6VB84	417 aa	Predicted RBP	27.98	■■■□□ 2.07
TMEM259-208	ENST00000592052	MYADML2	A6NDP7	307 aa		27.97	■■■□□ 2.07
TMEM259-208	ENST00000592052	IRX5	P78411	483 aa	Predicted RBP	27.97	■■■□□ 2.07
TMEM259-208	ENST00000592052	BEX3	Q00994	111 aa		27.97	■■■□□ 2.07
TMEM259-208	ENST00000592052	KLHDC9	Q8NEP7	349 aa		27.97	■■■□□ 2.07
TMEM259-208	ENST00000592052	PCDHA12	Q9UN75	941 aa		27.97	■■■□□ 2.07
TMEM259-208	ENST00000592052	ZEB2	O60315	1214 aa		27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	TXK	P42681	527 aa		27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	ATL3	Q6DD88	541 aa		27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	ZNF746	Q6NUN9	644 aa	Predicted RBP	27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	PCSK9	Q8NBP7	692 aa	Known RBP	27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	GPR20	Q99678	358 aa		27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	FTO	Q9C0B1	505 aa	Known RBP eCLIP	27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	CHMP5	Q9NZZ3	219 aa		27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	CLIC4	Q9Y696	253 aa		27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	FRMPD3	Q5JV73	1810 aa		27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	CCNE2	O96020	404 aa		27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	MMP3	P08254	477 aa		27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	ACTR2	P61160	394 aa		27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	ATP2C1	P98194	919 aa	Predicted RBP	27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	DGKD	Q16760	1214 aa		27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	USP28	Q96RU2	1077 aa		27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	TTC12	Q9H892	705 aa	Predicted RBP	27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	POLR3E	Q9NVU0	708 aa		27.96	■■■□□ 2.07
TMEM259-208	ENST00000592052	ELP1	O95163	1332 aa		27.95	■■■□□ 2.06
TMEM259-208	ENST00000592052	KBTBD13	C9JR72	458 aa		27.95	■■■□□ 2.06
TMEM259-208	ENST00000592052	PPFIA4	O75335	1185 aa		27.95	■■■□□ 2.06
TMEM259-208	ENST00000592052	CEBPZ	Q03701	1054 aa	Known RBP	27.95	■■■□□ 2.06
TMEM259-208	ENST00000592052	SMAP1	Q8IYB5	467 aa	Predicted RBP	27.95	■■■□□ 2.06
TMEM259-208	ENST00000592052	SEPT1	Q8WYJ6	367 aa		27.95	■■■□□ 2.06
TMEM259-208	ENST00000592052	VAV3	Q9UKW4	847 aa		27.95	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms