RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ANKRD40Q6AI12 368 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 NCAPH2Q6IBW4 605 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 DYMQ7RTS9 669 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 CCDC84Q86UT8 332 aaPredicted RBP11.55□□□□□ -0.56
VPS25-203ENST00000589520 GPBP1Q86WP2 473 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 IRF2BP1Q8IU81 584 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 KIAA0895Q8NCT3 520 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 NLGN2Q8NFZ4 835 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 ZNF507Q8TCN5 953 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 CEP63Q96MT8 703 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 NACC1Q96RE7 527 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 P2RX7Q99572 595 aaKnown RBP11.55□□□□□ -0.56
VPS25-203ENST00000589520 HSD17B14Q9BPX1 270 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 TUBGCP2Q9BSJ2 902 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 TEKT3Q9BXF9 490 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 GLIS2Q9BZE0 524 aaPredicted RBP11.55□□□□□ -0.56
VPS25-203ENST00000589520 VPS16Q9H269 839 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 SLC39A2Q9NP94 309 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 VAV3Q9UKW4 847 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 ZNF536O15090 1300 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 RPTORQ8N122 1335 aa11.55□□□□□ -0.56
VPS25-203ENST00000589520 UQCRHLA0A096LP55 91 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 SHTN1A0MZ66 631 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 E9PMD0 336 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 MFAP3LO75121 409 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 FLOT1O75955 427 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 UQCRHP07919 91 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 SPATA31C1P0DKV0 1188 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 PTPRAP18433 802 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 PMS1P54277 932 aaKnown RBP11.54□□□□□ -0.56
VPS25-203ENST00000589520 ECM1Q16610 540 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 HERC4Q5GLZ8 1057 aaPredicted RBP11.54□□□□□ -0.56
VPS25-203ENST00000589520 ANGEL2Q5VTE6 544 aaKnown RBP11.54□□□□□ -0.56
VPS25-203ENST00000589520 LRCH2Q5VUJ6 765 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 PCNX4Q63HM2 1172 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 KCNK18Q7Z418 384 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 TMEM139Q8IV31 216 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 RBM46Q8TBY0 533 aaKnown RBP11.54□□□□□ -0.56
VPS25-203ENST00000589520 PPP1R13BQ96KQ4 1090 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 C16orf45Q96MC5 204 aaPredicted RBP11.54□□□□□ -0.56
VPS25-203ENST00000589520 ERGIC2Q96RQ1 377 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 EIF2AK1Q9BQI3 630 aaKnown RBP11.54□□□□□ -0.56
VPS25-203ENST00000589520 ZNF577Q9BSK1 485 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 NOC4LQ9BVI4 516 aaKnown RBP11.54□□□□□ -0.56
VPS25-203ENST00000589520 EDEM3Q9BZQ6 932 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 EMILIN3Q9NT22 766 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 TBC1D22BQ9NU19 505 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 HOXC10Q9NYD6 342 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 TAB2Q9NYJ8 693 aa11.54□□□□□ -0.56
VPS25-203ENST00000589520 A0A1W2PQJ5 194 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 POTEB3A0JP26 581 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 TRIM49BA6NDI0 452 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 POTECB2RU33 542 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 ATP2A1O14983 1001 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 GAS7O60861 476 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 SSBP05455 408 aaKnown RBP eCLIP11.53□□□□□ -0.56
VPS25-203ENST00000589520 CCDC175P0C221 793 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 VCAM1P19320 739 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 MTIF2P46199 727 aaKnown RBP11.53□□□□□ -0.56
VPS25-203ENST00000589520 ADKP55263 362 aaKnown RBP11.53□□□□□ -0.56
VPS25-203ENST00000589520 PPP2R3AQ06190 1150 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 TBC1D8BQ0IIM8 1120 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 SPP2Q13103 211 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 SYCP1Q15431 976 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 MAN2A1Q16706 1144 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 EDRF1Q3B7T1 1238 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 POTEBQ6S5H4 581 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 CYP26C1Q6V0L0 522 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 STXBP4Q6ZWJ1 553 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 CREBRFQ8IUR6 639 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 ZNF397Q8NF99 534 aaPredicted RBP11.53□□□□□ -0.56
VPS25-203ENST00000589520 OR8K1Q8NGG5 319 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 CLEC4DQ8WXI8 215 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 TBC1D5Q92609 795 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 KLRG1Q96E93 195 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 CNOT6LQ96LI5 555 aaKnown RBP11.53□□□□□ -0.56
VPS25-203ENST00000589520 AGBL1Q96MI9 1066 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 TANGO6Q9C0B7 1094 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 SEMA6BQ9H3T3 888 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 RPAP3Q9H6T3 665 aaPredicted RBP11.53□□□□□ -0.56
VPS25-203ENST00000589520 FBXO28Q9NVF7 368 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 TMOD4Q9NZQ9 345 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 SEL1LQ9UBV2 794 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 CAPN11Q9UMQ6 739 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 ADAMTS5Q9UNA0 930 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 LUC7L2Q9Y383 392 aaKnown RBP11.53□□□□□ -0.56
VPS25-203ENST00000589520 COL4A3BPQ9Y5P4 624 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 FRMPD4Q14CM0 1322 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 ZNF541Q9H0D2 1346 aa11.53□□□□□ -0.56
VPS25-203ENST00000589520 MYH7BA7E2Y1 1941 aa11.52□□□□□ -0.56
VPS25-203ENST00000589520 KIF3CO14782 793 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 TBCAO75347 108 aaKnown RBP11.52□□□□□ -0.57
VPS25-203ENST00000589520 STAM2O75886 525 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 SLITRK3O94933 977 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 EGFRP00533 1210 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 CASP14P31944 242 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 DSG3P32926 999 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 STAT3P40763 770 aa11.52□□□□□ -0.57
VPS25-203ENST00000589520 MARSP56192 900 aaKnown RBP11.52□□□□□ -0.57
VPS25-203ENST00000589520 ETF1P62495 437 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms