RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 LETM2Q2VYF4 491 aa24.38■■□□□ 1.49
RETREG3-204ENST00000586796 METTL7BQ6UX53 244 aa24.38■■□□□ 1.49
RETREG3-204ENST00000586796 NIPA1Q7RTP0 329 aa24.38■■□□□ 1.49
RETREG3-204ENST00000586796 GIMAP8Q8ND71 665 aaPredicted RBP24.38■■□□□ 1.49
RETREG3-204ENST00000586796 PPTC7Q8NI37 304 aa24.38■■□□□ 1.49
RETREG3-204ENST00000586796 TNFRSF25Q93038 417 aa24.38■■□□□ 1.49
RETREG3-204ENST00000586796 SENP7Q9BQF6 1050 aa24.38■■□□□ 1.49
RETREG3-204ENST00000586796 TELO2Q9Y4R8 837 aa24.38■■□□□ 1.49
RETREG3-204ENST00000586796 TDP2O95551 362 aa24.37■■□□□ 1.49
RETREG3-204ENST00000586796 CIITAP33076 1130 aa24.37■■□□□ 1.49
RETREG3-204ENST00000586796 PSMC6P62333 389 aa24.37■■□□□ 1.49
RETREG3-204ENST00000586796 PURAQ00577 322 aaKnown RBP24.37■■□□□ 1.49
RETREG3-204ENST00000586796 DGKDQ16760 1214 aa24.37■■□□□ 1.49
RETREG3-204ENST00000586796 NEK8Q86SG6 692 aa24.37■■□□□ 1.49
RETREG3-204ENST00000586796 SDF4Q9BRK5 362 aa24.37■■□□□ 1.49
RETREG3-204ENST00000586796 MYH7BA7E2Y1 1941 aa24.37■■□□□ 1.49
RETREG3-204ENST00000586796 DDX39AO00148 427 aaKnown RBP24.36■■□□□ 1.49
RETREG3-204ENST00000586796 SETQ01105 290 aaPredicted RBP24.36■■□□□ 1.49
RETREG3-204ENST00000586796 ZNF577Q9BSK1 485 aa24.36■■□□□ 1.49
RETREG3-204ENST00000586796 MTG1Q9BT17 334 aaPredicted RBP24.36■■□□□ 1.49
RETREG3-204ENST00000586796 ATP11BQ9Y2G3 1177 aa24.36■■□□□ 1.49
RETREG3-204ENST00000586796 H3BQV1 296 aa24.35■■□□□ 1.49
RETREG3-204ENST00000586796 EVI5O60447 810 aa24.35■■□□□ 1.49
RETREG3-204ENST00000586796 KPNA6O60684 536 aa24.35■■□□□ 1.49
RETREG3-204ENST00000586796 CABYRO75952 493 aa24.35■■□□□ 1.49
RETREG3-204ENST00000586796 ITGB3BPQ13352 177 aaPredicted RBP24.35■■□□□ 1.49
RETREG3-204ENST00000586796 PPP1R13LQ8WUF5 828 aa24.35■■□□□ 1.49
RETREG3-204ENST00000586796 ELP1O95163 1332 aa24.35■■□□□ 1.49
RETREG3-204ENST00000586796 IPO5O00410 1097 aaKnown RBP24.34■■□□□ 1.49
RETREG3-204ENST00000586796 CCNT1O60563 726 aaKnown RBP24.34■■□□□ 1.49
RETREG3-204ENST00000586796 ZNF286BP0CG31 522 aa24.34■■□□□ 1.49
RETREG3-204ENST00000586796 ATP2B1P20020 1258 aa24.34■■□□□ 1.49
RETREG3-204ENST00000586796 RTP1P59025 263 aa24.34■■□□□ 1.49
RETREG3-204ENST00000586796 TRIM60Q495X7 471 aa24.34■■□□□ 1.49
RETREG3-204ENST00000586796 LARP1BQ659C4 914 aaKnown RBP24.34■■□□□ 1.49
RETREG3-204ENST00000586796 MCTP1Q6DN14 999 aa24.34■■□□□ 1.49
RETREG3-204ENST00000586796 C7orf61Q8IZ16 206 aa24.34■■□□□ 1.49
RETREG3-204ENST00000586796 GPR20Q99678 358 aa24.34■■□□□ 1.49
RETREG3-204ENST00000586796 JPH1Q9HDC5 661 aaPredicted RBP24.34■■□□□ 1.49
RETREG3-204ENST00000586796 DDX25Q9UHL0 483 aaKnown RBP24.34■■□□□ 1.49
RETREG3-204ENST00000586796 A0A0U1RQG5 324 aaPredicted RBP24.33■■□□□ 1.49
RETREG3-204ENST00000586796 ITGA7Q13683 1181 aa24.33■■□□□ 1.49
RETREG3-204ENST00000586796 UTP14CQ5TAP6 766 aaKnown RBP24.33■■□□□ 1.49
RETREG3-204ENST00000586796 LENG9Q96B70 501 aa24.33■■□□□ 1.49
RETREG3-204ENST00000586796 FOXP1Q9H334 677 aaPredicted RBP24.33■■□□□ 1.49
RETREG3-204ENST00000586796 SLC9A2Q9UBY0 812 aa24.33■■□□□ 1.49
RETREG3-204ENST00000586796 CYP3A7-CYP3A51PA0A087WV96 503 aa24.32■■□□□ 1.48
RETREG3-204ENST00000586796 KIF28PB7ZC32 967 aa24.32■■□□□ 1.48
RETREG3-204ENST00000586796 MSH4O15457 936 aa24.32■■□□□ 1.48
RETREG3-204ENST00000586796 PQBP1O60828 265 aaKnown RBP24.32■■□□□ 1.48
RETREG3-204ENST00000586796 PPFIA4O75335 1185 aa24.32■■□□□ 1.48
RETREG3-204ENST00000586796 CYP3A7P24462 503 aa24.32■■□□□ 1.48
RETREG3-204ENST00000586796 Q4G0T1 1027 aa24.32■■□□□ 1.48
RETREG3-204ENST00000586796 GJA10Q969M2 543 aa24.32■■□□□ 1.48
RETREG3-204ENST00000586796 DOCK5Q9H7D0 1870 aa24.32■■□□□ 1.48
RETREG3-204ENST00000586796 MKI67P46013 3256 aaKnown RBP24.32■■□□□ 1.48
RETREG3-204ENST00000586796 NFASCO94856 1347 aa24.32■■□□□ 1.48
RETREG3-204ENST00000586796 ARVCFO00192 962 aa24.31■■□□□ 1.48
RETREG3-204ENST00000586796 SLC37A4O43826 429 aa24.31■■□□□ 1.48
RETREG3-204ENST00000586796 HSP90AA1P07900 732 aaKnown RBP24.31■■□□□ 1.48
RETREG3-204ENST00000586796 FAM47CQ5HY64 1035 aa24.31■■□□□ 1.48
RETREG3-204ENST00000586796 MOXD1Q6UVY6 613 aa24.31■■□□□ 1.48
RETREG3-204ENST00000586796 SEPT1Q8WYJ6 367 aa24.31■■□□□ 1.48
RETREG3-204ENST00000586796 INTS4Q96HW7 963 aaKnown RBP24.31■■□□□ 1.48
RETREG3-204ENST00000586796 GRIN2DO15399 1336 aa24.31■■□□□ 1.48
RETREG3-204ENST00000586796 LGALS2P05162 132 aa24.3■■□□□ 1.48
RETREG3-204ENST00000586796 TCF7P36402 384 aaPredicted RBP24.3■■□□□ 1.48
RETREG3-204ENST00000586796 SNX17Q15036 470 aa24.3■■□□□ 1.48
RETREG3-204ENST00000586796 NBPF20Q3BBV1 942 aa24.3■■□□□ 1.48
RETREG3-204ENST00000586796 NOSTRINQ8IVI9 506 aa24.3■■□□□ 1.48
RETREG3-204ENST00000586796 SPRYD3Q8NCJ5 442 aa24.3■■□□□ 1.48
RETREG3-204ENST00000586796 KAT2BQ92831 832 aa24.3■■□□□ 1.48
RETREG3-204ENST00000586796 NAP1L4Q99733 375 aaKnown RBP24.3■■□□□ 1.48
RETREG3-204ENST00000586796 GSTTP1A0A1W2PQM5 241 aa24.29■■□□□ 1.48
RETREG3-204ENST00000586796 DHX15O43143 795 aaKnown RBP24.29■■□□□ 1.48
RETREG3-204ENST00000586796 HOXD8P13378 290 aaPredicted RBP24.29■■□□□ 1.48
RETREG3-204ENST00000586796 GCFC2P16383 781 aaKnown RBP24.29■■□□□ 1.48
RETREG3-204ENST00000586796 PSEN2P49810 448 aa24.29■■□□□ 1.48
RETREG3-204ENST00000586796 ACTR2P61160 394 aa24.29■■□□□ 1.48
RETREG3-204ENST00000586796 TLE2Q04725 743 aa24.29■■□□□ 1.48
RETREG3-204ENST00000586796 C1orf53Q5VUE5 145 aa24.29■■□□□ 1.48
RETREG3-204ENST00000586796 PPP4R3AQ6IN85 833 aa24.29■■□□□ 1.48
RETREG3-204ENST00000586796 TRIM50Q86XT4 487 aa24.29■■□□□ 1.48
RETREG3-204ENST00000586796 MBOAT7Q96N66 472 aa24.29■■□□□ 1.48
RETREG3-204ENST00000586796 TBC1D22BQ9NU19 505 aa24.29■■□□□ 1.48
RETREG3-204ENST00000586796 TCEAL9Q9UHQ7 104 aa24.29■■□□□ 1.48
RETREG3-204ENST00000586796 VPS37CA5D8V6 355 aaPredicted RBP24.28■■□□□ 1.48
RETREG3-204ENST00000586796 WNT7AO00755 349 aa24.28■■□□□ 1.48
RETREG3-204ENST00000586796 MARCH6O60337 910 aa24.28■■□□□ 1.48
RETREG3-204ENST00000586796 CCNE2O96020 404 aa24.28■■□□□ 1.48
RETREG3-204ENST00000586796 CDK7P50613 346 aa24.28■■□□□ 1.48
RETREG3-204ENST00000586796 MFSD10Q14728 455 aa24.28■■□□□ 1.48
RETREG3-204ENST00000586796 LRCH2Q5VUJ6 765 aa24.28■■□□□ 1.48
RETREG3-204ENST00000586796 C16orf70Q9BSU1 422 aa24.28■■□□□ 1.48
RETREG3-204ENST00000586796 NR2E3Q9Y5X4 410 aa24.28■■□□□ 1.48
RETREG3-204ENST00000586796 GAS7O60861 476 aa24.27■■□□□ 1.48
RETREG3-204ENST00000586796 F2P00734 622 aa24.27■■□□□ 1.48
RETREG3-204ENST00000586796 KIAA0753Q2KHM9 967 aa24.27■■□□□ 1.48
RETREG3-204ENST00000586796 POTEDQ86YR6 584 aa24.27■■□□□ 1.48
RETREG3-204ENST00000586796 SLC5A5Q92911 643 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms