RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 MSL3Q8N5Y2 521 aaKnown RBP20.1■□□□□ 0.81
EIF4A1-216ENST00000580888 ERCC4Q92889 916 aaPredicted RBP20.1■□□□□ 0.81
EIF4A1-216ENST00000580888 MTMR9Q96QG7 549 aa20.1■□□□□ 0.81
EIF4A1-216ENST00000580888 TINF2Q9BSI4 451 aa20.1■□□□□ 0.81
EIF4A1-216ENST00000580888 PSTPIP2Q9H939 334 aa20.1■□□□□ 0.81
EIF4A1-216ENST00000580888 SLC38A10Q9HBR0 1119 aa20.1■□□□□ 0.81
EIF4A1-216ENST00000580888 PRR12Q9ULL5 1215 aa20.1■□□□□ 0.81
EIF4A1-216ENST00000580888 PCDHA5Q9Y5H7 936 aa20.1■□□□□ 0.81
EIF4A1-216ENST00000580888 PCDHA1Q9Y5I3 950 aa20.1■□□□□ 0.81
EIF4A1-216ENST00000580888 LTBP2Q14767 1821 aa20.1■□□□□ 0.81
EIF4A1-216ENST00000580888 ZBED4O75132 1171 aa20.09■□□□□ 0.81
EIF4A1-216ENST00000580888 PGK2P07205 417 aa20.09■□□□□ 0.81
EIF4A1-216ENST00000580888 FDX1P10109 184 aa20.09■□□□□ 0.81
EIF4A1-216ENST00000580888 TRAF1Q13077 416 aa20.09■□□□□ 0.81
EIF4A1-216ENST00000580888 PNOCQ13519 176 aa20.09■□□□□ 0.81
EIF4A1-216ENST00000580888 POSTNQ15063 836 aa20.09■□□□□ 0.81
EIF4A1-216ENST00000580888 SNRNP48Q6IEG0 339 aaKnown RBP20.09■□□□□ 0.81
EIF4A1-216ENST00000580888 FAM160B2Q86V87 743 aa20.09■□□□□ 0.81
EIF4A1-216ENST00000580888 FBXO11Q86XK2 927 aa20.09■□□□□ 0.81
EIF4A1-216ENST00000580888 DHX40Q8IX18 779 aaKnown RBP20.09■□□□□ 0.81
EIF4A1-216ENST00000580888 CEP57L1Q8IYX8 460 aa20.09■□□□□ 0.81
EIF4A1-216ENST00000580888 CHURC1Q8WUH1 139 aa20.09■□□□□ 0.81
EIF4A1-216ENST00000580888 CRYGNQ8WXF5 182 aa20.09■□□□□ 0.81
EIF4A1-216ENST00000580888 AK8Q96MA6 479 aa20.09■□□□□ 0.81
EIF4A1-216ENST00000580888 SENP6Q9GZR1 1112 aaPredicted RBP20.09■□□□□ 0.81
EIF4A1-216ENST00000580888 RANBP17Q9H2T7 1088 aaKnown RBP20.09■□□□□ 0.81
EIF4A1-216ENST00000580888 DNAJC25-GNG10A0A024R161 153 aa20.08■□□□□ 0.81
EIF4A1-216ENST00000580888 MEIS2O14770 477 aa20.08■□□□□ 0.81
EIF4A1-216ENST00000580888 OR52Z1P0C646 297 aa20.08■□□□□ 0.81
EIF4A1-216ENST00000580888 SYN1P17600 705 aa20.08■□□□□ 0.81
EIF4A1-216ENST00000580888 MAGEA10P43363 369 aaPredicted RBP20.08■□□□□ 0.81
EIF4A1-216ENST00000580888 STAT2P52630 851 aa20.08■□□□□ 0.81
EIF4A1-216ENST00000580888 AP3B2Q13367 1082 aa20.08■□□□□ 0.81
EIF4A1-216ENST00000580888 LETM2Q2VYF4 491 aa20.08■□□□□ 0.81
EIF4A1-216ENST00000580888 DPCR1Q3MIW9 517 aa20.08■□□□□ 0.81
EIF4A1-216ENST00000580888 PRAMEF19Q5SWL8 479 aa20.08■□□□□ 0.81
EIF4A1-216ENST00000580888 TRIML1Q8N9V2 468 aa20.08■□□□□ 0.81
EIF4A1-216ENST00000580888 MBOAT7Q96N66 472 aa20.08■□□□□ 0.81
EIF4A1-216ENST00000580888 NAT10Q9H0A0 1025 aaKnown RBP20.08■□□□□ 0.81
EIF4A1-216ENST00000580888 RIPK3Q9Y572 518 aa20.08■□□□□ 0.81
EIF4A1-216ENST00000580888 CYP3A7-CYP3A51PA0A087WV96 503 aa20.07■□□□□ 0.8
EIF4A1-216ENST00000580888 NEMFO60524 1076 aa20.07■□□□□ 0.8
EIF4A1-216ENST00000580888 CCNT1O60563 726 aaKnown RBP20.07■□□□□ 0.8
EIF4A1-216ENST00000580888 ADCY5O95622 1261 aa20.07■□□□□ 0.8
EIF4A1-216ENST00000580888 CYP3A7P24462 503 aa20.07■□□□□ 0.8
EIF4A1-216ENST00000580888 GJC2Q5T442 439 aaPredicted RBP20.07■□□□□ 0.8
EIF4A1-216ENST00000580888 PDXDC2PQ6P474 469 aa20.07■□□□□ 0.8
EIF4A1-216ENST00000580888 SARM1Q6SZW1 724 aa20.07■□□□□ 0.8
EIF4A1-216ENST00000580888 MOXD1Q6UVY6 613 aa20.07■□□□□ 0.8
EIF4A1-216ENST00000580888 IQUBQ8NA54 791 aa20.07■□□□□ 0.8
EIF4A1-216ENST00000580888 KIFC2Q96AC6 838 aa20.07■□□□□ 0.8
EIF4A1-216ENST00000580888 PAGE5Q96GU1 130 aa20.07■□□□□ 0.8
EIF4A1-216ENST00000580888 CCDC34Q96HJ3 373 aa20.07■□□□□ 0.8
EIF4A1-216ENST00000580888 NAP1L4Q99733 375 aaKnown RBP20.07■□□□□ 0.8
EIF4A1-216ENST00000580888 SYNGAP1Q96PV0 1343 aa20.06■□□□□ 0.8
EIF4A1-216ENST00000580888 KBTBD13C9JR72 458 aa20.06■□□□□ 0.8
EIF4A1-216ENST00000580888 PIK3CDO00329 1044 aa20.06■□□□□ 0.8
EIF4A1-216ENST00000580888 OPLAHO14841 1288 aa20.06■□□□□ 0.8
EIF4A1-216ENST00000580888 ZNF865P0CJ78 1059 aaPredicted RBP20.06■□□□□ 0.8
EIF4A1-216ENST00000580888 GCFC2P16383 781 aaKnown RBP20.06■□□□□ 0.8
EIF4A1-216ENST00000580888 USP11P51784 963 aa20.06■□□□□ 0.8
EIF4A1-216ENST00000580888 MORC3Q14149 939 aa20.06■□□□□ 0.8
EIF4A1-216ENST00000580888 SNX17Q15036 470 aa20.06■□□□□ 0.8
EIF4A1-216ENST00000580888 UBE2SQ16763 222 aa20.06■□□□□ 0.8
EIF4A1-216ENST00000580888 MAMDC4Q6UXC1 1216 aa20.06■□□□□ 0.8
EIF4A1-216ENST00000580888 ZNF467Q7Z7K2 595 aaPredicted RBP20.06■□□□□ 0.8
EIF4A1-216ENST00000580888 IGSF22Q8N9C0 903 aa20.06■□□□□ 0.8
EIF4A1-216ENST00000580888 CHST13Q8NET6 341 aa20.06■□□□□ 0.8
EIF4A1-216ENST00000580888 FBXO40Q9UH90 709 aa20.06■□□□□ 0.8
EIF4A1-216ENST00000580888 MAN1B1Q9UKM7 699 aa20.06■□□□□ 0.8
EIF4A1-216ENST00000580888 A0A087WWV3 80 aa20.05■□□□□ 0.8
EIF4A1-216ENST00000580888 IKBKBO14920 756 aa20.05■□□□□ 0.8
EIF4A1-216ENST00000580888 FOSP01100 380 aaPredicted RBP20.05■□□□□ 0.8
EIF4A1-216ENST00000580888 PRR29P0C7W0 189 aa20.05■□□□□ 0.8
EIF4A1-216ENST00000580888 BMP6P22004 513 aa20.05■□□□□ 0.8
EIF4A1-216ENST00000580888 FXR2P51116 673 aaKnown RBP eCLIP20.05■□□□□ 0.83e-6■■■□□ 15.4
EIF4A1-216ENST00000580888 LRRC41Q15345 812 aa20.05■□□□□ 0.8
EIF4A1-216ENST00000580888 CT47A1Q5JQC4 288 aaPredicted RBP20.05■□□□□ 0.8
EIF4A1-216ENST00000580888 C1orf53Q5VUE5 145 aa20.05■□□□□ 0.8
EIF4A1-216ENST00000580888 PDILTQ8N807 584 aa20.05■□□□□ 0.8
EIF4A1-216ENST00000580888 DHX58Q96C10 678 aa20.05■□□□□ 0.8
EIF4A1-216ENST00000580888 RAVER2Q9HCJ3 691 aaKnown RBP20.05■□□□□ 0.8
EIF4A1-216ENST00000580888 SOX1O00570 391 aaPredicted RBP20.04■□□□□ 0.8
EIF4A1-216ENST00000580888 DPYDQ12882 1025 aa20.04■□□□□ 0.8
EIF4A1-216ENST00000580888 PDIA5Q14554 519 aa20.04■□□□□ 0.8
EIF4A1-216ENST00000580888 NCAPHQ15003 741 aa20.04■□□□□ 0.8
EIF4A1-216ENST00000580888 SLC39A5Q6ZMH5 540 aa20.04■□□□□ 0.8
EIF4A1-216ENST00000580888 CPXCR1Q8N123 301 aa20.04■□□□□ 0.8
EIF4A1-216ENST00000580888 CTDP1Q9Y5B0 961 aaPredicted RBP20.04■□□□□ 0.8
EIF4A1-216ENST00000580888 RARBP10826 455 aa20.03■□□□□ 0.8
EIF4A1-216ENST00000580888 AKR1A1P14550 325 aa20.03■□□□□ 0.8
EIF4A1-216ENST00000580888 TAL1P17542 331 aaPredicted RBP20.03■□□□□ 0.8
EIF4A1-216ENST00000580888 TXLNAP40222 546 aa20.03■□□□□ 0.8
EIF4A1-216ENST00000580888 RTP1P59025 263 aa20.03■□□□□ 0.8
EIF4A1-216ENST00000580888 ZRSR1Q15695 479 aaKnown RBP20.03■□□□□ 0.8
EIF4A1-216ENST00000580888 LRIT3Q3SXY7 679 aa20.03■□□□□ 0.8
EIF4A1-216ENST00000580888 NAALADL2Q58DX5 795 aa20.03■□□□□ 0.8
EIF4A1-216ENST00000580888 GPR153Q6NV75 609 aa20.03■□□□□ 0.8
EIF4A1-216ENST00000580888 USP17L6PQ6QN14 398 aa20.03■□□□□ 0.8
EIF4A1-216ENST00000580888 PLA2G4DQ86XP0 818 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms