RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 FBXO40Q9UH90 709 aa10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 NAP1L2Q9ULW6 460 aaPredicted RBP10.96□□□□□ -0.65
NPLOC4-219ENST00000576713 ZNFX1Q9P2E3 1918 aaKnown RBP10.96□□□□□ -0.66
NPLOC4-219ENST00000576713 PNMA6FA0A0J9YX94 578 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 CALM1P0DP23 149 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 CALM2P0DP24 149 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 CALM3P0DP25 149 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 CYBAP13498 195 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 EN2P19622 333 aaPredicted RBP10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 RFX1P22670 979 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 CALML3P27482 149 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 KIF5BP33176 963 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 RBM25P49756 843 aaKnown RBP10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 METAP2P50579 478 aaKnown RBP eCLIP10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 RAB15P59190 212 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 RPS6P62753 249 aaKnown RBP10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 FGD1P98174 961 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 STK3Q13188 491 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 NOL8Q76FK4 1167 aaKnown RBP10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 CYP4X1Q8N118 509 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 PHKBQ93100 1093 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 LENG1Q96BZ8 264 aaPredicted RBP10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 DDX11Q96FC9 970 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 TINF2Q9BSI4 451 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 AMNQ9BXJ7 453 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 BACH2Q9BYV9 841 aa10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.95□□□□□ -0.66
NPLOC4-219ENST00000576713 BAZ2BQ9UIF8 2168 aaKnown RBP10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 ABCB11O95342 1321 aa10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 PTPDC1A2A3K4 754 aa10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 TTC24A2A3L6 582 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 ERVH48-1M5A8F1 160 aa10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 ZNF865P0CJ78 1059 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 SMARCA1P28370 1054 aa10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 HOXA13P31271 388 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 NEK4P51957 841 aa10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 PKN1Q16512 942 aa10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 ANO1Q5XXA6 986 aa10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 WWC2Q6AWC2 1192 aa10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 MAMDC4Q6UXC1 1216 aa10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 RNF207Q6ZRF8 634 aa10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 SYTL5Q8TDW5 730 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 DEFB118Q96PH6 123 aa10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 TAAR1Q96RJ0 339 aa10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 RNF208Q9H0X6 261 aa10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 ALDH8A1Q9H2A2 487 aaPredicted RBP10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 DIS3Q9Y2L1 958 aaKnown RBP10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 PCDHA1Q9Y5I3 950 aa10.94□□□□□ -0.66
NPLOC4-219ENST00000576713 PFASO15067 1338 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 RPTORQ8N122 1335 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 J3QL48 77 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 CTDNEP1O95476 244 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 NR3C2P08235 984 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 HSD17B4P51659 736 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 RCAN1P53805 252 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 GHRHRQ02643 423 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 SCRN1Q12765 414 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 ME3Q16798 604 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 SYNE3Q6ZMZ3 975 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 ARMCX2Q7L311 632 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 DEPDC4Q8N2C3 294 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 NECAB1Q8N987 351 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 RRP36Q96EU6 259 aaKnown RBP10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 TBC1D32Q96NH3 1257 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 LZTS2Q9BRK4 669 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 RBM28Q9NW13 759 aaKnown RBP10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 DOLKQ9UPQ8 538 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 PCDHB11Q9Y5F2 797 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 FRMPD3Q5JV73 1810 aa10.93□□□□□ -0.66
NPLOC4-219ENST00000576713 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 STXBP3O00186 592 aa10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 LZTS3O60299 673 aaPredicted RBP10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 CFBP00751 764 aa10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 EDNRBP24530 442 aa10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 GNAQP50148 359 aa10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 ALDH5A1P51649 535 aaPredicted RBP10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 UBXN2AP68543 259 aa10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 UBE2SQ16763 222 aa10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 USP17L6PQ6QN14 398 aa10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 HEATR3Q7Z4Q2 680 aa10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 CCDC116Q8IYX3 515 aa10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 RGS22Q8NE09 1264 aa10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 IL31RAQ8NI17 732 aa10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 U2AF1L4Q8WU68 220 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 ZNF274Q96GC6 653 aaPredicted RBP10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 AIFM3Q96NN9 605 aa10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 PDGFCQ9NRA1 345 aa10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 MRPL11Q9Y3B7 192 aaKnown RBP10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 WASF2Q9Y6W5 498 aa10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 MYH6P13533 1939 aa10.92□□□□□ -0.66
NPLOC4-219ENST00000576713 SYNGAP1Q96PV0 1343 aa10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 RANBP2P49792 3224 aaKnown RBP10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 KIAA0100Q14667 2235 aaKnown RBP10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 MCM3APO60318 1980 aa10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 MEIS2O14770 477 aa10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 PFKFB2O60825 505 aa10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 GJB1P08034 283 aa10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 IFNAR1P17181 557 aa10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 GJA8P48165 433 aa10.91□□□□□ -0.66
NPLOC4-219ENST00000576713 DHX9Q08211 1270 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms