RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 FILIP1Q7Z7B0 1213 aa31.75■■■□□ 2.67
CTDNEP1-210ENST00000574322 DNAJC19Q96DA6 116 aa31.75■■■□□ 2.67
CTDNEP1-210ENST00000574322 TRERF1Q96PN7 1200 aa31.75■■■□□ 2.67
CTDNEP1-210ENST00000574322 UIMC1Q96RL1 719 aa31.75■■■□□ 2.67
CTDNEP1-210ENST00000574322 ELP3Q9H9T3 547 aa31.75■■■□□ 2.67
CTDNEP1-210ENST00000574322 COL11A1P12107 1806 aaPredicted RBP31.75■■■□□ 2.67
CTDNEP1-210ENST00000574322 SPAG1Q07617 926 aa31.75■■■□□ 2.67
CTDNEP1-210ENST00000574322 NR1I3Q14994 352 aa31.75■■■□□ 2.67
CTDNEP1-210ENST00000574322 PCNX4Q63HM2 1172 aa31.75■■■□□ 2.67
CTDNEP1-210ENST00000574322 WNK4Q96J92 1243 aa31.75■■■□□ 2.67
CTDNEP1-210ENST00000574322 CREBZFQ9NS37 354 aa31.75■■■□□ 2.67
CTDNEP1-210ENST00000574322 HOXC10Q9NYD6 342 aa31.75■■■□□ 2.67
CTDNEP1-210ENST00000574322 PTPRFP10586 1907 aa31.74■■■□□ 2.67
CTDNEP1-210ENST00000574322 PLA2G4BP0C869 781 aa31.74■■■□□ 2.67
CTDNEP1-210ENST00000574322 SLC10A4Q96EP9 437 aa31.74■■■□□ 2.67
CTDNEP1-210ENST00000574322 ZNF214Q9UL59 606 aaPredicted RBP31.74■■■□□ 2.67
CTDNEP1-210ENST00000574322 E9PMD0 336 aa31.73■■■□□ 2.67
CTDNEP1-210ENST00000574322 C1QTNF8P60827 252 aa31.73■■■□□ 2.67
CTDNEP1-210ENST00000574322 RPS6P62753 249 aaKnown RBP31.73■■■□□ 2.67
CTDNEP1-210ENST00000574322 UBXN2AP68543 259 aa31.73■■■□□ 2.67
CTDNEP1-210ENST00000574322 TPD52L1Q16890 204 aaPredicted RBP31.73■■■□□ 2.67
CTDNEP1-210ENST00000574322 LRCH2Q5VUJ6 765 aa31.73■■■□□ 2.67
CTDNEP1-210ENST00000574322 B3GNT9Q6UX72 402 aa31.73■■■□□ 2.67
CTDNEP1-210ENST00000574322 RIT2Q99578 217 aa31.73■■■□□ 2.67
CTDNEP1-210ENST00000574322 BMP2KQ9NSY1 1161 aaPredicted RBP31.73■■■□□ 2.67
CTDNEP1-210ENST00000574322 LIMA1Q9UHB6 759 aaKnown RBP31.73■■■□□ 2.67
CTDNEP1-210ENST00000574322 MAPK8IP1Q9UQF2 711 aa31.73■■■□□ 2.67
CTDNEP1-210ENST00000574322 MUTP22033 750 aa31.72■■■□□ 2.67
CTDNEP1-210ENST00000574322 LRMPQ12912 555 aa31.72■■■□□ 2.67
CTDNEP1-210ENST00000574322 TKFCQ3LXA3 575 aa31.72■■■□□ 2.67
CTDNEP1-210ENST00000574322 HSP90AA4PQ58FG1 418 aa31.72■■■□□ 2.67
CTDNEP1-210ENST00000574322 KIAA0895Q8NCT3 520 aa31.72■■■□□ 2.67
CTDNEP1-210ENST00000574322 CCDC150Q8NCX0 1101 aa31.72■■■□□ 2.67
CTDNEP1-210ENST00000574322 HSD17B14Q9BPX1 270 aa31.72■■■□□ 2.67
CTDNEP1-210ENST00000574322 WDR11Q9BZH6 1224 aa31.72■■■□□ 2.67
CTDNEP1-210ENST00000574322 TUFT1Q9NNX1 390 aa31.72■■■□□ 2.67
CTDNEP1-210ENST00000574322 PYCARDQ9ULZ3 195 aa31.72■■■□□ 2.67
CTDNEP1-210ENST00000574322 UBIAD1Q9Y5Z9 338 aa31.72■■■□□ 2.67
CTDNEP1-210ENST00000574322 CCNE1P24864 410 aa31.72■■■□□ 2.67
CTDNEP1-210ENST00000574322 SLC12A3P55017 1021 aa31.72■■■□□ 2.67
CTDNEP1-210ENST00000574322 TTI2Q6NXR4 508 aa31.72■■■□□ 2.67
CTDNEP1-210ENST00000574322 NOC3LQ8WTT2 800 aaKnown RBP31.72■■■□□ 2.67
CTDNEP1-210ENST00000574322 ADD3Q9UEY8 706 aaKnown RBP31.72■■■□□ 2.67
CTDNEP1-210ENST00000574322 BICDL2A1A5D9 508 aa31.71■■■□□ 2.67
CTDNEP1-210ENST00000574322 EML1O00423 815 aa31.71■■■□□ 2.67
CTDNEP1-210ENST00000574322 FCER1AP12319 257 aa31.71■■■□□ 2.67
CTDNEP1-210ENST00000574322 ITGB5P18084 799 aa31.71■■■□□ 2.67
CTDNEP1-210ENST00000574322 RNF207Q6ZRF8 634 aa31.71■■■□□ 2.67
CTDNEP1-210ENST00000574322 DYMQ7RTS9 669 aa31.71■■■□□ 2.67
CTDNEP1-210ENST00000574322 EIF2AK1Q9BQI3 630 aaKnown RBP31.71■■■□□ 2.67
CTDNEP1-210ENST00000574322 HOMER2Q9NSB8 354 aa31.71■■■□□ 2.67
CTDNEP1-210ENST00000574322 RNF146Q9NTX7 359 aa31.71■■■□□ 2.67
CTDNEP1-210ENST00000574322 SPTLC3Q9NUV7 552 aa31.71■■■□□ 2.67
CTDNEP1-210ENST00000574322 DNM3Q9UQ16 869 aa31.71■■■□□ 2.67
CTDNEP1-210ENST00000574322 RIPK3Q9Y572 518 aa31.71■■■□□ 2.67
CTDNEP1-210ENST00000574322 POTEFA5A3E0 1075 aa31.7■■■□□ 2.67
CTDNEP1-210ENST00000574322 ARP10275 920 aa31.7■■■□□ 2.67
CTDNEP1-210ENST00000574322 FOXR2Q6PJQ5 311 aa31.7■■■□□ 2.67
CTDNEP1-210ENST00000574322 POTEGQ6S5H5 508 aa31.7■■■□□ 2.67
CTDNEP1-210ENST00000574322 POTEEQ6S8J3 1075 aa31.7■■■□□ 2.67
CTDNEP1-210ENST00000574322 P2RX5Q93086 422 aa31.7■■■□□ 2.67
CTDNEP1-210ENST00000574322 ZNF577Q9BSK1 485 aa31.7■■■□□ 2.67
CTDNEP1-210ENST00000574322 THAP9Q9H5L6 903 aa31.7■■■□□ 2.67
CTDNEP1-210ENST00000574322 CYP11B2P19099 503 aa31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 ERO1BQ86YB8 467 aa31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 GUF1Q8N442 669 aaKnown RBP31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 SYT2Q8N9I0 419 aaPredicted RBP31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 TAAR1Q96RJ0 339 aa31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 SPDYE16A6NNV3 312 aaPredicted RBP31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 GAS7O60861 476 aa31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 ZNF157P51786 506 aaPredicted RBP31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 PMS1P54277 932 aaKnown RBP31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 PPATQ06203 517 aa31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 ARID5BQ14865 1188 aa31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 TMEM132BQ14DG7 1078 aa31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 RGMBQ6NW40 437 aa31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 XRRA1Q6P2D8 792 aa31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 IL31RAQ8NI17 732 aa31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 TEX13BQ9BXU2 312 aa31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 LOC285556D6RIA3 1793 aa31.69■■■□□ 2.66
CTDNEP1-210ENST00000574322 FRMD3A2A2Y4 597 aa31.68■■■□□ 2.66
CTDNEP1-210ENST00000574322 SPDYE5A6NIY4 337 aa31.68■■■□□ 2.66
CTDNEP1-210ENST00000574322 IPO5O00410 1097 aaKnown RBP31.68■■■□□ 2.66
CTDNEP1-210ENST00000574322 TBX2Q13207 712 aaPredicted RBP31.68■■■□□ 2.66
CTDNEP1-210ENST00000574322 SNRNP48Q6IEG0 339 aaKnown RBP31.68■■■□□ 2.66
CTDNEP1-210ENST00000574322 SLC30A10Q6XR72 485 aa31.68■■■□□ 2.66
CTDNEP1-210ENST00000574322 IRF2BP1Q8IU81 584 aa31.68■■■□□ 2.66
CTDNEP1-210ENST00000574322 CNKSR2Q8WXI2 1034 aa31.68■■■□□ 2.66
CTDNEP1-210ENST00000574322 OTUD5Q96G74 571 aa31.68■■■□□ 2.66
CTDNEP1-210ENST00000574322 JADE2Q9NQC1 790 aa31.68■■■□□ 2.66
CTDNEP1-210ENST00000574322 MRPS9P82933 396 aaKnown RBP31.67■■■□□ 2.66
CTDNEP1-210ENST00000574322 NOLC1Q14978 699 aaKnown RBP eCLIP31.67■■■□□ 2.66
CTDNEP1-210ENST00000574322 PGM5Q15124 567 aa31.67■■■□□ 2.66
CTDNEP1-210ENST00000574322 TCP11X2Q5H9J9 407 aa31.67■■■□□ 2.66
CTDNEP1-210ENST00000574322 CENPPQ6IPU0 288 aa31.67■■■□□ 2.66
CTDNEP1-210ENST00000574322 ARMCX5Q6P1M9 558 aa31.67■■■□□ 2.66
CTDNEP1-210ENST00000574322 GPBP1Q86WP2 473 aa31.67■■■□□ 2.66
CTDNEP1-210ENST00000574322 OPTNQ96CV9 577 aa31.67■■■□□ 2.66
CTDNEP1-210ENST00000574322 HHIPL1Q96JK4 782 aa31.67■■■□□ 2.66
CTDNEP1-210ENST00000574322 TEKT3Q9BXF9 490 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms