RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 SSPNQ14714 243 aa4.33□□□□□ -1.72
CHD9-207ENST00000562806 ARHGAP44Q17R89 818 aa4.33□□□□□ -1.72
CHD9-207ENST00000562806 FIGNQ5HY92 759 aa4.33□□□□□ -1.72
CHD9-207ENST00000562806 CD300LDQ6UXZ3 194 aa4.33□□□□□ -1.72
CHD9-207ENST00000562806 TTLL7Q6ZT98 887 aa4.33□□□□□ -1.72
CHD9-207ENST00000562806 KCTD1Q719H9 257 aa4.33□□□□□ -1.72
CHD9-207ENST00000562806 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.33□□□□□ -1.72
CHD9-207ENST00000562806 TMEFF1Q8IYR6 380 aa4.33□□□□□ -1.72
CHD9-207ENST00000562806 LINC00482Q8N8I6 264 aa4.33□□□□□ -1.72
CHD9-207ENST00000562806 KYQ8NBH2 561 aa4.33□□□□□ -1.72
CHD9-207ENST00000562806 SMARCC2Q8TAQ2 1214 aa4.33□□□□□ -1.72
CHD9-207ENST00000562806 DACT3Q96B18 629 aaPredicted RBP4.33□□□□□ -1.72
CHD9-207ENST00000562806 RNPC3Q96LT9 517 aaKnown RBP4.33□□□□□ -1.72
CHD9-207ENST00000562806 CELF4Q9BZC1 486 aaKnown RBP4.33□□□□□ -1.72
CHD9-207ENST00000562806 MAGEC2Q9UBF1 373 aaPredicted RBP4.33□□□□□ -1.72
CHD9-207ENST00000562806 PLAAQ9Y263 795 aa4.33□□□□□ -1.72
CHD9-207ENST00000562806 PCDHA9Q9Y5H5 950 aa4.33□□□□□ -1.72
CHD9-207ENST00000562806 HCFC2Q9Y5Z7 792 aa4.33□□□□□ -1.72
CHD9-207ENST00000562806 CCDC66A2RUB6 948 aa4.32□□□□□ -1.72
CHD9-207ENST00000562806 ENPP3O14638 875 aa4.32□□□□□ -1.72
CHD9-207ENST00000562806 CDC45O75419 566 aa4.32□□□□□ -1.72
CHD9-207ENST00000562806 ASMTLO95671 621 aa4.32□□□□□ -1.72
CHD9-207ENST00000562806 HTRA3P83110 453 aa4.32□□□□□ -1.72
CHD9-207ENST00000562806 TUSC3Q13454 348 aa4.32□□□□□ -1.72
CHD9-207ENST00000562806 FZD5Q13467 585 aa4.32□□□□□ -1.72
CHD9-207ENST00000562806 UBE2R2Q712K3 238 aaPredicted RBP4.32□□□□□ -1.72
CHD9-207ENST00000562806 BRAPQ7Z569 592 aa4.32□□□□□ -1.72
CHD9-207ENST00000562806 CILP2Q8IUL8 1156 aa4.32□□□□□ -1.72
CHD9-207ENST00000562806 SP8Q8IXZ3 490 aa4.32□□□□□ -1.72
CHD9-207ENST00000562806 LINC01356Q8N9X3 169 aa4.32□□□□□ -1.72
CHD9-207ENST00000562806 SLC7A14Q8TBB6 771 aa4.32□□□□□ -1.72
CHD9-207ENST00000562806 CLIC6Q96NY7 704 aa4.32□□□□□ -1.72
CHD9-207ENST00000562806 FEZ1Q99689 392 aa4.32□□□□□ -1.72
CHD9-207ENST00000562806 IRF2BPLQ9H1B7 796 aa4.32□□□□□ -1.72
CHD9-207ENST00000562806 PPARGC1AQ9UBK2 798 aaKnown RBP4.32□□□□□ -1.72
CHD9-207ENST00000562806 ATP23Q9Y6H3 246 aa4.32□□□□□ -1.72
CHD9-207ENST00000562806 TCRBV16S1A1N1A0A5B0 115 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 ESYT3A0FGR9 886 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 TLDC2A0PJX2 215 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 SH3D21A4FU49 640 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 SLC27A2O14975 620 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 CLASP2O75122 1294 aaKnown RBP4.31□□□□□ -1.72
CHD9-207ENST00000562806 CHGBP05060 677 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 ENO2P09104 434 aaPredicted RBP4.31□□□□□ -1.72
CHD9-207ENST00000562806 SRGAP2CP0DJJ0 459 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 ZSCAN22P10073 491 aaPredicted RBP4.31□□□□□ -1.72
CHD9-207ENST00000562806 PYGMP11217 842 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 FAHP16930 419 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 JAG1P78504 1218 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 PAN2Q504Q3 1202 aaKnown RBP4.31□□□□□ -1.72
CHD9-207ENST00000562806 TEPPQ6URK8 271 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 ARHGAP36Q6ZRI8 547 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 SAPCD2Q86UD0 394 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 ARRDC4Q8NCT1 418 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 FNIP1Q8TF40 1166 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 C11orf84Q9BUA3 381 aaPredicted RBP4.31□□□□□ -1.72
CHD9-207ENST00000562806 TRIM39Q9HCM9 518 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 FANCLQ9NW38 375 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 NTMQ9P121 344 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 SRPK3Q9UPE1 567 aa4.31□□□□□ -1.72
CHD9-207ENST00000562806 NKRFO15226 690 aaKnown RBP eCLIP4.3□□□□□ -1.72
CHD9-207ENST00000562806 OPA1O60313 960 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 HIP1RO75146 1068 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 SASH1O94885 1247 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 RAPGEF3O95398 923 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 LRG1P02750 347 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 C8BP07358 591 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 COL6A2P12110 1019 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 PDE6AP16499 860 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 MC3RP41968 323 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 LIMS1P48059 325 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 DNM2P50570 870 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 HERVK_113P62684 666 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 PABPC4Q13310 644 aaKnown RBP eCLIP4.3□□□□□ -1.72
CHD9-207ENST00000562806 CR1LQ2VPA4 569 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 BTBD8Q5XKL5 378 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 VASNQ6EMK4 673 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 HHIPL2Q6UWX4 724 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 C1QL4Q86Z23 238 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 AHI1Q8N157 1196 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 NINJ1Q92982 152 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 ZBTB8AQ96BR9 441 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 SLKQ9H2G2 1235 aaPredicted RBP4.3□□□□□ -1.72
CHD9-207ENST00000562806 BCAS3Q9H6U6 928 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 CABP5Q9NP86 173 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 LUC7LQ9NQ29 371 aaKnown RBP4.3□□□□□ -1.72
CHD9-207ENST00000562806 DLL4Q9NR61 685 aa4.3□□□□□ -1.72
CHD9-207ENST00000562806 SLC12A8A0AV02 714 aa4.29□□□□□ -1.72
CHD9-207ENST00000562806 ZNF561-AS1K7EIQ3 104 aa4.29□□□□□ -1.72
CHD9-207ENST00000562806 RASGRP1O95267 797 aa4.29□□□□□ -1.72
CHD9-207ENST00000562806 CKMP06732 381 aa4.29□□□□□ -1.72
CHD9-207ENST00000562806 RPL13P26373 211 aaKnown RBP4.29□□□□□ -1.72
CHD9-207ENST00000562806 HSD3B2P26439 372 aa4.29□□□□□ -1.72
CHD9-207ENST00000562806 STAT5AP42229 794 aa4.29□□□□□ -1.72
CHD9-207ENST00000562806 ITGA1P56199 1179 aa4.29□□□□□ -1.72
CHD9-207ENST00000562806 PLEKHG4Q58EX7 1191 aa4.29□□□□□ -1.72
CHD9-207ENST00000562806 ZCCHC8Q6NZY4 707 aaKnown RBP4.29□□□□□ -1.72
CHD9-207ENST00000562806 DPP8Q6V1X1 898 aaPredicted RBP4.29□□□□□ -1.72
CHD9-207ENST00000562806 OSTM1Q86WC4 334 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms