RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 TMC5Q6UXY8 1006 aa5.21□□□□□ -1.58
HDGFL3-202ENST00000562702 Q6ZUG5 572 aa5.21□□□□□ -1.58
HDGFL3-202ENST00000562702 TRIM48Q8IWZ4 208 aa5.21□□□□□ -1.58
HDGFL3-202ENST00000562702 ARRDC4Q8NCT1 418 aa5.21□□□□□ -1.58
HDGFL3-202ENST00000562702 KLHL6Q8WZ60 621 aa5.21□□□□□ -1.58
HDGFL3-202ENST00000562702 EDAQ92838 391 aa5.21□□□□□ -1.58
HDGFL3-202ENST00000562702 A0A087X1B8 175 aa5.2□□□□□ -1.58
HDGFL3-202ENST00000562702 UNCXA6NJT0 531 aa5.2□□□□□ -1.58
HDGFL3-202ENST00000562702 FOXS1O43638 330 aa5.2□□□□□ -1.58
HDGFL3-202ENST00000562702 SMAD2Q15796 467 aaKnown RBP5.2□□□□□ -1.58
HDGFL3-202ENST00000562702 GTF2IRD2BQ6EKJ0 949 aa5.2□□□□□ -1.58
HDGFL3-202ENST00000562702 VASNQ6EMK4 673 aa5.2□□□□□ -1.58
HDGFL3-202ENST00000562702 VHLLQ6RSH7 139 aa5.2□□□□□ -1.58
HDGFL3-202ENST00000562702 GTF2IRD2Q86UP8 949 aa5.2□□□□□ -1.58
HDGFL3-202ENST00000562702 TRIM59Q8IWR1 403 aa5.2□□□□□ -1.58
HDGFL3-202ENST00000562702 DNAJC10Q8IXB1 793 aa5.2□□□□□ -1.58
HDGFL3-202ENST00000562702 FRS2Q8WU20 508 aa5.2□□□□□ -1.58
HDGFL3-202ENST00000562702 IKZF4Q9H2S9 585 aa5.2□□□□□ -1.58
HDGFL3-202ENST00000562702 NKX2-4Q9H2Z4 354 aa5.2□□□□□ -1.58
HDGFL3-202ENST00000562702 EPB41L1Q9H4G0 881 aa5.2□□□□□ -1.58
HDGFL3-202ENST00000562702 WDR26Q9H7D7 661 aa5.2□□□□□ -1.58
HDGFL3-202ENST00000562702 MYOTQ9UBF9 498 aa5.2□□□□□ -1.58
HDGFL3-202ENST00000562702 KRIT1O00522 736 aa5.19□□□□□ -1.58
HDGFL3-202ENST00000562702 TADA3O75528 432 aa5.19□□□□□ -1.58
HDGFL3-202ENST00000562702 LRG1P02750 347 aa5.19□□□□□ -1.58
HDGFL3-202ENST00000562702 GIPRP48546 466 aa5.19□□□□□ -1.58
HDGFL3-202ENST00000562702 LSAMPQ13449 338 aa5.19□□□□□ -1.58
HDGFL3-202ENST00000562702 EMC4Q5J8M3 183 aa5.19□□□□□ -1.58
HDGFL3-202ENST00000562702 TAX1BP1Q86VP1 789 aa5.19□□□□□ -1.58
HDGFL3-202ENST00000562702 REXO1L1PQ8IX06 675 aa5.19□□□□□ -1.58
HDGFL3-202ENST00000562702 NUDT10Q8NFP7 164 aa5.19□□□□□ -1.58
HDGFL3-202ENST00000562702 NPLOC4Q8TAT6 608 aa5.19□□□□□ -1.58
HDGFL3-202ENST00000562702 NUDT11Q96G61 164 aa5.19□□□□□ -1.58
HDGFL3-202ENST00000562702 SMOC1Q9H4F8 434 aa5.19□□□□□ -1.58
HDGFL3-202ENST00000562702 DLL4Q9NR61 685 aa5.19□□□□□ -1.58
HDGFL3-202ENST00000562702 HSPBP1Q9NZL4 362 aa5.19□□□□□ -1.58
HDGFL3-202ENST00000562702 KIAA1522Q9P206 1035 aaPredicted RBP5.19□□□□□ -1.58
HDGFL3-202ENST00000562702 APEX2Q9UBZ4 518 aa5.19□□□□□ -1.58
HDGFL3-202ENST00000562702 NARSO43776 548 aaKnown RBP5.18□□□□□ -1.58
HDGFL3-202ENST00000562702 NANOS3P60323 173 aaKnown RBP5.18□□□□□ -1.58
HDGFL3-202ENST00000562702 RAC3P60763 192 aa5.18□□□□□ -1.58
HDGFL3-202ENST00000562702 NLRP10Q86W26 655 aa5.18□□□□□ -1.58
HDGFL3-202ENST00000562702 ZG16BQ96DA0 208 aa5.18□□□□□ -1.58
HDGFL3-202ENST00000562702 FAM89AQ96GI7 184 aa5.18□□□□□ -1.58
HDGFL3-202ENST00000562702 AJUBAQ96IF1 538 aa5.18□□□□□ -1.58
HDGFL3-202ENST00000562702 CRAMP1Q96RY5 1269 aa5.18□□□□□ -1.58
HDGFL3-202ENST00000562702 GINM1Q9NU53 330 aa5.18□□□□□ -1.58
HDGFL3-202ENST00000562702 TMEFF2Q9UIK5 374 aaPredicted RBP5.18□□□□□ -1.58
HDGFL3-202ENST00000562702 KLHL18O94889 574 aa5.17□□□□□ -1.58
HDGFL3-202ENST00000562702 CPP00450 1065 aa5.17□□□□□ -1.58
HDGFL3-202ENST00000562702 ADH4P08319 380 aa5.17□□□□□ -1.58
HDGFL3-202ENST00000562702 HOXC12P31275 282 aa5.17□□□□□ -1.58
HDGFL3-202ENST00000562702 ZNF394Q53GI3 561 aa5.17□□□□□ -1.58
HDGFL3-202ENST00000562702 CYP4F22Q6NT55 531 aa5.17□□□□□ -1.58
HDGFL3-202ENST00000562702 C1orf210Q8IVY1 113 aa5.17□□□□□ -1.58
HDGFL3-202ENST00000562702 ZNF513Q8N8E2 541 aaPredicted RBP5.17□□□□□ -1.58
HDGFL3-202ENST00000562702 NEU4Q8WWR8 484 aaPredicted RBP5.17□□□□□ -1.58
HDGFL3-202ENST00000562702 EXTL1Q92935 676 aa5.17□□□□□ -1.58
HDGFL3-202ENST00000562702 CCDC140Q96MF4 163 aa5.17□□□□□ -1.58
HDGFL3-202ENST00000562702 CLDND1Q9NY35 253 aa5.17□□□□□ -1.58
HDGFL3-202ENST00000562702 EFR3BQ9Y2G0 817 aa5.17□□□□□ -1.58
HDGFL3-202ENST00000562702 NUB1Q9Y5A7 615 aa5.17□□□□□ -1.58
HDGFL3-202ENST00000562702 PCDHGB7Q9Y5F8 929 aa5.17□□□□□ -1.58
HDGFL3-202ENST00000562702 SNRPB2P08579 225 aaKnown RBP5.16□□□□□ -1.58
HDGFL3-202ENST00000562702 LTBRP36941 435 aa5.16□□□□□ -1.58
HDGFL3-202ENST00000562702 ECI1P42126 302 aa5.16□□□□□ -1.58
HDGFL3-202ENST00000562702 SOX9P48436 509 aa5.16□□□□□ -1.58
HDGFL3-202ENST00000562702 RBM25P49756 843 aaKnown RBP5.16□□□□□ -1.58
HDGFL3-202ENST00000562702 USP10Q14694 798 aaKnown RBP5.16□□□□□ -1.58
HDGFL3-202ENST00000562702 NCAPHQ15003 741 aa5.16□□□□□ -1.58
HDGFL3-202ENST00000562702 ACBD5Q5T8D3 534 aaPredicted RBP5.16□□□□□ -1.58
HDGFL3-202ENST00000562702 AGBL4Q5VU57 503 aa5.16□□□□□ -1.58
HDGFL3-202ENST00000562702 POLNQ7Z5Q5 900 aa5.16□□□□□ -1.58
HDGFL3-202ENST00000562702 DTX3Q8N9I9 347 aa5.16□□□□□ -1.58
HDGFL3-202ENST00000562702 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.16□□□□□ -1.58
HDGFL3-202ENST00000562702 CPLX3Q8WVH0 158 aa5.16□□□□□ -1.58
HDGFL3-202ENST00000562702 NEIL1Q96FI4 390 aaPredicted RBP5.16□□□□□ -1.58
HDGFL3-202ENST00000562702 PLEKHG4BQ96PX9 1271 aa5.16□□□□□ -1.58
HDGFL3-202ENST00000562702 PCDHA2Q9Y5H9 948 aa5.16□□□□□ -1.58
HDGFL3-202ENST00000562702 RAD17O75943 681 aa5.15□□□□□ -1.59
HDGFL3-202ENST00000562702 COL6A1P12109 1028 aa5.15□□□□□ -1.59
HDGFL3-202ENST00000562702 ACO1P21399 889 aaKnown RBP5.15□□□□□ -1.59
HDGFL3-202ENST00000562702 CSF2RBP32927 897 aa5.15□□□□□ -1.59
HDGFL3-202ENST00000562702 CASP7P55210 303 aa5.15□□□□□ -1.59
HDGFL3-202ENST00000562702 HDLBPQ00341 1268 aaKnown RBP5.15□□□□□ -1.59
HDGFL3-202ENST00000562702 GPR155Q7Z3F1 870 aa5.15□□□□□ -1.59
HDGFL3-202ENST00000562702 METTL16Q86W50 562 aaKnown RBP5.15□□□□□ -1.59
HDGFL3-202ENST00000562702 ZNF654Q8IZM8 581 aa5.15□□□□□ -1.59
HDGFL3-202ENST00000562702 TTLL11Q8NHH1 800 aa5.15□□□□□ -1.59
HDGFL3-202ENST00000562702 MRGPRX3Q96LB0 322 aa5.15□□□□□ -1.59
HDGFL3-202ENST00000562702 LRP2BPQ9P2M1 347 aa5.15□□□□□ -1.59
HDGFL3-202ENST00000562702 DDX41Q9UJV9 622 aaKnown RBP5.15□□□□□ -1.59
HDGFL3-202ENST00000562702 H0Y858 1186 aa5.14□□□□□ -1.59
HDGFL3-202ENST00000562702 MAKP20794 623 aa5.14□□□□□ -1.59
HDGFL3-202ENST00000562702 KCNJ6P48051 423 aa5.14□□□□□ -1.59
HDGFL3-202ENST00000562702 IGFL4Q6B9Z1 124 aa5.14□□□□□ -1.59
HDGFL3-202ENST00000562702 NT5DC4Q86YG4 428 aa5.14□□□□□ -1.59
HDGFL3-202ENST00000562702 CCDC103Q8IW40 242 aa5.14□□□□□ -1.59
HDGFL3-202ENST00000562702 PPIL6Q8IXY8 311 aa5.14□□□□□ -1.59
HDGFL3-202ENST00000562702 FUKQ8N0W3 1084 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms