RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 Q6ZUG5 572 aa20.64■□□□□ 0.89
TNFAIP2-206ENST00000560428 SLC17A8Q8NDX2 589 aa20.64■□□□□ 0.89
TNFAIP2-206ENST00000560428 GPR20Q99678 358 aa20.64■□□□□ 0.89
TNFAIP2-206ENST00000560428 AGXT2Q9BYV1 514 aa20.64■□□□□ 0.89
TNFAIP2-206ENST00000560428 ZNF576Q9H609 170 aa20.64■□□□□ 0.89
TNFAIP2-206ENST00000560428 TUT1Q9H6E5 874 aaKnown RBP20.64■□□□□ 0.89
TNFAIP2-206ENST00000560428 BCAS3Q9H6U6 928 aa20.64■□□□□ 0.89
TNFAIP2-206ENST00000560428 RIC8AQ9NPQ8 531 aa20.64■□□□□ 0.89
TNFAIP2-206ENST00000560428 MSRAQ9UJ68 235 aa20.64■□□□□ 0.89
TNFAIP2-206ENST00000560428 PCDHA6Q9UN73 950 aa20.64■□□□□ 0.89
TNFAIP2-206ENST00000560428 PCDHA8Q9Y5H6 950 aa20.64■□□□□ 0.89
TNFAIP2-206ENST00000560428 V9GY48 417 aaPredicted RBP20.64■□□□□ 0.89
TNFAIP2-206ENST00000560428 TRIP12Q14669 1992 aaPredicted RBP20.64■□□□□ 0.89
TNFAIP2-206ENST00000560428 GBF1Q92538 1859 aa20.63■□□□□ 0.89
TNFAIP2-206ENST00000560428 ZBBXA8MT70 800 aa20.63■□□□□ 0.89
TNFAIP2-206ENST00000560428 MAFGO15525 162 aa20.63■□□□□ 0.89
TNFAIP2-206ENST00000560428 CPA1P15085 419 aa20.63■□□□□ 0.89
TNFAIP2-206ENST00000560428 ITGB5P18084 799 aa20.63■□□□□ 0.89
TNFAIP2-206ENST00000560428 RPS6KB1P23443 525 aa20.63■□□□□ 0.89
TNFAIP2-206ENST00000560428 HOXC8P31273 242 aa20.63■□□□□ 0.89
TNFAIP2-206ENST00000560428 PBX2P40425 430 aa20.63■□□□□ 0.89
TNFAIP2-206ENST00000560428 ERICH6BQ5W0A0 696 aa20.63■□□□□ 0.89
TNFAIP2-206ENST00000560428 TYW1BQ6NUM6 668 aa20.63■□□□□ 0.89
TNFAIP2-206ENST00000560428 LRRC8DQ7L1W4 858 aa20.63■□□□□ 0.89
TNFAIP2-206ENST00000560428 BRF1Q92994 677 aa20.63■□□□□ 0.89
TNFAIP2-206ENST00000560428 GLT8D2Q9H1C3 349 aa20.63■□□□□ 0.89
TNFAIP2-206ENST00000560428 BARHL2Q9NY43 387 aa20.63■□□□□ 0.89
TNFAIP2-206ENST00000560428 UBIAD1Q9Y5Z9 338 aa20.63■□□□□ 0.89
TNFAIP2-206ENST00000560428 STXBP3O00186 592 aa20.62■□□□□ 0.89
TNFAIP2-206ENST00000560428 FOSP01100 380 aaPredicted RBP20.62■□□□□ 0.89
TNFAIP2-206ENST00000560428 CKBP12277 381 aa20.62■□□□□ 0.89
TNFAIP2-206ENST00000560428 ADCY7P51828 1080 aa20.62■□□□□ 0.89
TNFAIP2-206ENST00000560428 APOBRQ0VD83 1088 aa20.62■□□□□ 0.89
TNFAIP2-206ENST00000560428 MYLIPQ8WY64 445 aa20.62■□□□□ 0.89
TNFAIP2-206ENST00000560428 NAP1L2Q9ULW6 460 aaPredicted RBP20.62■□□□□ 0.89
TNFAIP2-206ENST00000560428 C17orf102A2RUQ5 167 aa20.61■□□□□ 0.89
TNFAIP2-206ENST00000560428 BAIAP3O94812 1187 aa20.61■□□□□ 0.89
TNFAIP2-206ENST00000560428 KCNA2P16389 499 aa20.61■□□□□ 0.89
TNFAIP2-206ENST00000560428 ATP2A2P16615 1042 aaKnown RBP20.61■□□□□ 0.89
TNFAIP2-206ENST00000560428 MTMR1Q13613 665 aa20.61■□□□□ 0.89
TNFAIP2-206ENST00000560428 GRIN2CQ14957 1233 aa20.61■□□□□ 0.89
TNFAIP2-206ENST00000560428 TRIM71Q2Q1W2 868 aaKnown RBP20.61■□□□□ 0.89
TNFAIP2-206ENST00000560428 SERINC5Q86VE9 423 aa20.61■□□□□ 0.89
TNFAIP2-206ENST00000560428 FTOQ9C0B1 505 aaKnown RBP eCLIP20.61■□□□□ 0.89
TNFAIP2-206ENST00000560428 JADE2Q9NQC1 790 aa20.61■□□□□ 0.89
TNFAIP2-206ENST00000560428 ZNF215Q9UL58 517 aaPredicted RBP20.61■□□□□ 0.89
TNFAIP2-206ENST00000560428 PCDHA11Q9Y5I1 949 aa20.61■□□□□ 0.89
TNFAIP2-206ENST00000560428 CHD9Q3L8U1 2897 aa20.61■□□□□ 0.89
TNFAIP2-206ENST00000560428 CXCL10P02778 98 aa20.6■□□□□ 0.89
TNFAIP2-206ENST00000560428 SMIM10L2AP0DMW4 78 aa20.6■□□□□ 0.89
TNFAIP2-206ENST00000560428 SMIM10L2BP0DMW5 78 aa20.6■□□□□ 0.89
TNFAIP2-206ENST00000560428 FOSL2P15408 326 aa20.6■□□□□ 0.89
TNFAIP2-206ENST00000560428 ADD1P35611 737 aaKnown RBP20.6■□□□□ 0.89
TNFAIP2-206ENST00000560428 AP3B2Q13367 1082 aa20.6■□□□□ 0.89
TNFAIP2-206ENST00000560428 HIC1Q14526 733 aa20.6■□□□□ 0.89
TNFAIP2-206ENST00000560428 PFKFB3Q16875 520 aaPredicted RBP20.6■□□□□ 0.89
TNFAIP2-206ENST00000560428 PHOSPHO2Q8TCD6 241 aa20.6■□□□□ 0.89
TNFAIP2-206ENST00000560428 SLC9A7Q96T83 725 aa20.6■□□□□ 0.89
TNFAIP2-206ENST00000560428 PPP4R2Q9NY27 417 aa20.6■□□□□ 0.89
TNFAIP2-206ENST00000560428 SMCO2A6NFE2 343 aa20.59■□□□□ 0.89
TNFAIP2-206ENST00000560428 ATP9AO75110 1047 aa20.59■□□□□ 0.89
TNFAIP2-206ENST00000560428 CLK2P49760 499 aaKnown RBP20.59■□□□□ 0.89
TNFAIP2-206ENST00000560428 EVCP57679 992 aa20.59■□□□□ 0.89
TNFAIP2-206ENST00000560428 ZNF200P98182 395 aaPredicted RBP20.59■□□□□ 0.89
TNFAIP2-206ENST00000560428 GPNMBQ14956 572 aa20.59■□□□□ 0.89
TNFAIP2-206ENST00000560428 SLC28A3Q9HAS3 691 aa20.59■□□□□ 0.89
TNFAIP2-206ENST00000560428 YBX2Q9Y2T7 364 aaKnown RBP20.59■□□□□ 0.89
TNFAIP2-206ENST00000560428 TET1Q8NFU7 2136 aa20.59■□□□□ 0.89
TNFAIP2-206ENST00000560428 EYSQ5T1H1 3165 aa20.58■□□□□ 0.89
TNFAIP2-206ENST00000560428 ESYT2A0FGR8 921 aa20.58■□□□□ 0.89
TNFAIP2-206ENST00000560428 GNAT1P11488 350 aa20.58■□□□□ 0.89
TNFAIP2-206ENST00000560428 SCG2P13521 617 aa20.58■□□□□ 0.89
TNFAIP2-206ENST00000560428 CNKSR3Q6P9H4 555 aa20.58■□□□□ 0.89
TNFAIP2-206ENST00000560428 TRAF7Q6Q0C0 670 aa20.58■□□□□ 0.89
TNFAIP2-206ENST00000560428 MAFAQ8NHW3 353 aaPredicted RBP20.58■□□□□ 0.89
TNFAIP2-206ENST00000560428 ATP6V0A1Q93050 837 aa20.58■□□□□ 0.89
TNFAIP2-206ENST00000560428 WNT8BQ93098 351 aa20.58■□□□□ 0.89
TNFAIP2-206ENST00000560428 MXRA8Q9BRK3 442 aa20.58■□□□□ 0.89
TNFAIP2-206ENST00000560428 ANO3Q9BYT9 981 aa20.58■□□□□ 0.89
TNFAIP2-206ENST00000560428 NKX2-4Q9H2Z4 354 aa20.58■□□□□ 0.89
TNFAIP2-206ENST00000560428 RNPEPQ9H4A4 650 aa20.58■□□□□ 0.89
TNFAIP2-206ENST00000560428 EMSYQ7Z589 1322 aa20.57■□□□□ 0.88
TNFAIP2-206ENST00000560428 PRPF3O43395 683 aaKnown RBP20.57■□□□□ 0.88
TNFAIP2-206ENST00000560428 NBNO60934 754 aa20.57■□□□□ 0.88
TNFAIP2-206ENST00000560428 CAND2O75155 1236 aa20.57■□□□□ 0.88
TNFAIP2-206ENST00000560428 TCF7P36402 384 aaPredicted RBP20.57■□□□□ 0.88
TNFAIP2-206ENST00000560428 SREBF1P36956 1147 aa20.57■□□□□ 0.88
TNFAIP2-206ENST00000560428 SP4Q02446 784 aa20.57■□□□□ 0.88
TNFAIP2-206ENST00000560428 ZNF618Q5T7W0 954 aa20.57■□□□□ 0.88
TNFAIP2-206ENST00000560428 UTP14CQ5TAP6 766 aaKnown RBP20.57■□□□□ 0.88
TNFAIP2-206ENST00000560428 MCTP2Q6DN12 878 aa20.57■□□□□ 0.88
TNFAIP2-206ENST00000560428 RUFY3Q7L099 469 aa20.57■□□□□ 0.88
TNFAIP2-206ENST00000560428 TRIM50Q86XT4 487 aa20.57■□□□□ 0.88
TNFAIP2-206ENST00000560428 CCDC12Q8WUD4 166 aaPredicted RBP20.57■□□□□ 0.88
TNFAIP2-206ENST00000560428 SEPT1Q8WYJ6 367 aa20.57■□□□□ 0.88
TNFAIP2-206ENST00000560428 ZSWIM6Q9HCJ5 1215 aa20.57■□□□□ 0.88
TNFAIP2-206ENST00000560428 TELO2Q9Y4R8 837 aa20.57■□□□□ 0.88
TNFAIP2-206ENST00000560428 RABGGTBP53611 331 aa20.56■□□□□ 0.88
TNFAIP2-206ENST00000560428 CEP55Q53EZ4 464 aa20.56■□□□□ 0.88
TNFAIP2-206ENST00000560428 TM6SF1Q9BZW5 370 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms