RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 ZNF577Q9BSK1 485 aa24.58■■□□□ 1.53
SNX1-206ENST00000559389 BCAS3Q9H6U6 928 aa24.58■■□□□ 1.53
SNX1-206ENST00000559389 MSH4O15457 936 aa24.57■■□□□ 1.52
SNX1-206ENST00000559389 SORBS3O60504 671 aa24.57■■□□□ 1.52
SNX1-206ENST00000559389 CPT1AP50416 773 aa24.57■■□□□ 1.52
SNX1-206ENST00000559389 BEX3Q00994 111 aa24.57■■□□□ 1.52
SNX1-206ENST00000559389 ORC2Q13416 577 aaPredicted RBP24.57■■□□□ 1.52
SNX1-206ENST00000559389 TTC38Q5R3I4 469 aa24.57■■□□□ 1.52
SNX1-206ENST00000559389 CYFIP1Q7L576 1253 aa24.57■■□□□ 1.52
SNX1-206ENST00000559389 FERMT3Q86UX7 667 aa24.57■■□□□ 1.52
SNX1-206ENST00000559389 POTEDQ86YR6 584 aa24.57■■□□□ 1.52
SNX1-206ENST00000559389 AFG1LQ8WV93 481 aa24.57■■□□□ 1.52
SNX1-206ENST00000559389 SPATA33Q96N06 139 aa24.57■■□□□ 1.52
SNX1-206ENST00000559389 SDF4Q9BRK5 362 aa24.57■■□□□ 1.52
SNX1-206ENST00000559389 MLXIPQ9HAP2 919 aa24.57■■□□□ 1.52
SNX1-206ENST00000559389 JPH1Q9HDC5 661 aaPredicted RBP24.57■■□□□ 1.52
SNX1-206ENST00000559389 KCNMB3Q9NPA1 279 aa24.57■■□□□ 1.52
SNX1-206ENST00000559389 A6NJR5 290 aa24.56■■□□□ 1.52
SNX1-206ENST00000559389 KBTBD13C9JR72 458 aa24.56■■□□□ 1.52
SNX1-206ENST00000559389 MYCNP04198 464 aaPredicted RBP24.56■■□□□ 1.52
SNX1-206ENST00000559389 MMP3P08254 477 aa24.56■■□□□ 1.52
SNX1-206ENST00000559389 TOB1P50616 345 aaPredicted RBP24.56■■□□□ 1.52
SNX1-206ENST00000559389 HSDL1Q3SXM5 330 aa24.56■■□□□ 1.52
SNX1-206ENST00000559389 RILPL1Q5EBL4 403 aa24.56■■□□□ 1.52
SNX1-206ENST00000559389 SLC5A5Q92911 643 aa24.56■■□□□ 1.52
SNX1-206ENST00000559389 DHX15O43143 795 aaKnown RBP24.55■■□□□ 1.52
SNX1-206ENST00000559389 NEMFO60524 1076 aa24.55■■□□□ 1.52
SNX1-206ENST00000559389 HOXD8P13378 290 aaPredicted RBP24.55■■□□□ 1.52
SNX1-206ENST00000559389 ATP2B1P20020 1258 aa24.55■■□□□ 1.52
SNX1-206ENST00000559389 NBR1Q14596 966 aa24.55■■□□□ 1.52
SNX1-206ENST00000559389 GNASQ5JWF2 1037 aa24.55■■□□□ 1.52
SNX1-206ENST00000559389 PCSK9Q8NBP7 692 aaKnown RBP24.55■■□□□ 1.52
SNX1-206ENST00000559389 TSEN34Q9BSV6 310 aaKnown RBP24.55■■□□□ 1.52
SNX1-206ENST00000559389 PHF24Q9UPV7 400 aa24.55■■□□□ 1.52
SNX1-206ENST00000559389 KIAA0100Q14667 2235 aaKnown RBP24.55■■□□□ 1.52
SNX1-206ENST00000559389 MYH15Q9Y2K3 1946 aa24.55■■□□□ 1.52
SNX1-206ENST00000559389 TBX3O15119 743 aa24.54■■□□□ 1.52
SNX1-206ENST00000559389 MCM7P33993 719 aa24.54■■□□□ 1.52
SNX1-206ENST00000559389 PKP1Q13835 747 aa24.54■■□□□ 1.52
SNX1-206ENST00000559389 KCNA10Q16322 511 aa24.54■■□□□ 1.52
SNX1-206ENST00000559389 BRDTQ58F21 947 aaPredicted RBP24.54■■□□□ 1.52
SNX1-206ENST00000559389 DIS3LQ8TF46 1054 aaKnown RBP24.54■■□□□ 1.52
SNX1-206ENST00000559389 UIMC1Q96RL1 719 aa24.54■■□□□ 1.52
SNX1-206ENST00000559389 RIT2Q99578 217 aa24.54■■□□□ 1.52
SNX1-206ENST00000559389 GPR20Q99678 358 aa24.54■■□□□ 1.52
SNX1-206ENST00000559389 TBC1D22BQ9NU19 505 aa24.54■■□□□ 1.52
SNX1-206ENST00000559389 SLC9A2Q9UBY0 812 aa24.54■■□□□ 1.52
SNX1-206ENST00000559389 MOXD2PA6NHM9 499 aa24.53■■□□□ 1.52
SNX1-206ENST00000559389 ACLYP53396 1101 aa24.53■■□□□ 1.52
SNX1-206ENST00000559389 SP4Q02446 784 aa24.53■■□□□ 1.52
SNX1-206ENST00000559389 LRCH2Q5VUJ6 765 aa24.53■■□□□ 1.52
SNX1-206ENST00000559389 UBE2Q1Q7Z7E8 422 aa24.53■■□□□ 1.52
SNX1-206ENST00000559389 FAM20AQ96MK3 541 aa24.53■■□□□ 1.52
SNX1-206ENST00000559389 RBM19Q9Y4C8 960 aaKnown RBP24.53■■□□□ 1.52
SNX1-206ENST00000559389 TELO2Q9Y4R8 837 aa24.53■■□□□ 1.52
SNX1-206ENST00000559389 DDX39AO00148 427 aaKnown RBP24.52■■□□□ 1.52
SNX1-206ENST00000559389 NOP56O00567 594 aaKnown RBP24.52■■□□□ 1.52
SNX1-206ENST00000559389 ZEB2O60315 1214 aa24.52■■□□□ 1.52
SNX1-206ENST00000559389 GAS7O60861 476 aa24.52■■□□□ 1.52
SNX1-206ENST00000559389 PSMD10O75832 226 aa24.52■■□□□ 1.52
SNX1-206ENST00000559389 ASGR1P07306 291 aa24.52■■□□□ 1.52
SNX1-206ENST00000559389 ZSCAN22P10073 491 aaPredicted RBP24.52■■□□□ 1.52
SNX1-206ENST00000559389 COL6A1P12109 1028 aa24.52■■□□□ 1.52
SNX1-206ENST00000559389 CALCRLQ16602 461 aa24.52■■□□□ 1.52
SNX1-206ENST00000559389 HAS1Q92839 578 aa24.52■■□□□ 1.52
SNX1-206ENST00000559389 GJA10Q969M2 543 aa24.52■■□□□ 1.52
SNX1-206ENST00000559389 TEKT3Q9BXF9 490 aa24.52■■□□□ 1.52
SNX1-206ENST00000559389 ZSCAN16Q9H4T2 348 aaPredicted RBP24.52■■□□□ 1.52
SNX1-206ENST00000559389 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.52■■□□□ 1.52
SNX1-206ENST00000559389 POLR3EQ9NVU0 708 aa24.52■■□□□ 1.52
SNX1-206ENST00000559389 PCDHB6Q9Y5E3 794 aa24.52■■□□□ 1.52
SNX1-206ENST00000559389 CCNE2O96020 404 aa24.51■■□□□ 1.51
SNX1-206ENST00000559389 PURAQ00577 322 aaKnown RBP24.51■■□□□ 1.51
SNX1-206ENST00000559389 KRT76Q01546 638 aa24.51■■□□□ 1.51
SNX1-206ENST00000559389 ZNF174Q15697 407 aa24.51■■□□□ 1.51
SNX1-206ENST00000559389 DGKDQ16760 1214 aa24.51■■□□□ 1.51
SNX1-206ENST00000559389 TMEM60Q9H2L4 133 aa24.51■■□□□ 1.51
SNX1-206ENST00000559389 TCEAL9Q9UHQ7 104 aa24.51■■□□□ 1.51
SNX1-206ENST00000559389 ELP1O95163 1332 aa24.51■■□□□ 1.51
SNX1-206ENST00000559389 A0A1W2PQ45 241 aaPredicted RBP24.5■■□□□ 1.51
SNX1-206ENST00000559389 A0A1W2PQY0 241 aa24.5■■□□□ 1.51
SNX1-206ENST00000559389 KPNA6O60684 536 aa24.5■■□□□ 1.51
SNX1-206ENST00000559389 F13A1P00488 732 aa24.5■■□□□ 1.51
SNX1-206ENST00000559389 DDIT3P35638 169 aa24.5■■□□□ 1.51
SNX1-206ENST00000559389 ACTR2P61160 394 aa24.5■■□□□ 1.51
SNX1-206ENST00000559389 ZNF746Q6NUN9 644 aaPredicted RBP24.5■■□□□ 1.51
SNX1-206ENST00000559389 CXCL17Q6UXB2 119 aa24.5■■□□□ 1.51
SNX1-206ENST00000559389 SLFN12Q8IYM2 578 aa24.5■■□□□ 1.51
SNX1-206ENST00000559389 MTMR9Q96QG7 549 aa24.5■■□□□ 1.51
SNX1-206ENST00000559389 C11orf49Q9H6J7 331 aa24.5■■□□□ 1.51
SNX1-206ENST00000559389 VAV3Q9UKW4 847 aa24.5■■□□□ 1.51
SNX1-206ENST00000559389 GSTTP1A0A1W2PQM5 241 aa24.49■■□□□ 1.51
SNX1-206ENST00000559389 PPFIA4O75335 1185 aa24.49■■□□□ 1.51
SNX1-206ENST00000559389 MYL3P08590 195 aa24.49■■□□□ 1.51
SNX1-206ENST00000559389 OR52Z1P0C646 297 aa24.49■■□□□ 1.51
SNX1-206ENST00000559389 B3GNT9Q6UX72 402 aa24.49■■□□□ 1.51
SNX1-206ENST00000559389 SEPT1Q8WYJ6 367 aa24.49■■□□□ 1.51
SNX1-206ENST00000559389 PAWRQ96IZ0 340 aaKnown RBP24.49■■□□□ 1.51
SNX1-206ENST00000559389 CABYRO75952 493 aa24.48■■□□□ 1.51
SNX1-206ENST00000559389 BAG4O95429 457 aaKnown RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms