RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 TCRBV5S4A2TA0A5A2 114 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 OR14I1A6ND48 311 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.75□□□□□ -1.65
SRP54-209ENST00000555746 M0R2C6 588 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 TRAF5O00463 557 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 KRIT1O00522 736 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 HGSO14964 777 aaPredicted RBP4.75□□□□□ -1.65
SRP54-209ENST00000555746 NKRFO15226 690 aaKnown RBP eCLIP4.75□□□□□ -1.65
SRP54-209ENST00000555746 MAFKO60675 156 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 KPNA6O60684 536 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 ZBTB7AO95365 584 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 AMY2AP04746 511 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 PDE6AP16499 860 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 AMY2BP19961 511 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 POU3F3P20264 500 aaPredicted RBP4.75□□□□□ -1.65
SRP54-209ENST00000555746 MAPKAPK2P49137 400 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 DNM2P50570 870 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 NEK4P51957 841 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 EPHA5P54756 1037 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 TMEM62Q0P6H9 643 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 DHCR24Q15392 516 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 SEPT7Q16181 437 aaKnown RBP4.75□□□□□ -1.65
SRP54-209ENST00000555746 ARHGAP44Q17R89 818 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 HHIPL2Q6UWX4 724 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 AFAP1L2Q8N4X5 818 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 CHST14Q8NCH0 376 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 PIP4K2CQ8TBX8 421 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 PHOSPHO1Q8TCT1 267 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 SH3RF2Q8TEC5 729 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 TSPAN17Q96FV3 270 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 PEX11GQ96HA9 241 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 AP5M1Q9H0R1 490 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 SMOC1Q9H4F8 434 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 SMURF1Q9HCE7 757 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 CATSPERZQ9NTU4 200 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 KLHL14Q9P2G3 628 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 B4GALT6Q9UBX8 382 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 IQSEC2Q5JU85 1478 aa4.75□□□□□ -1.65
SRP54-209ENST00000555746 ZCCHC6Q5VYS8 1495 aaKnown RBP4.75□□□□□ -1.65
SRP54-209ENST00000555746 ZC3H12DA2A288 527 aaKnown RBP4.74□□□□□ -1.65
SRP54-209ENST00000555746 ZNF503-AS2A6NEH8 195 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 ABLIM1O14639 778 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 F2P00734 622 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 COL6A2P12110 1019 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 IRAK1P51617 712 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 JAM2P57087 298 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 AMPD3Q01432 767 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 SLC9A5Q14940 896 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 FIGNQ5HY92 759 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 ADGRF1Q5T601 910 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 STEAP3Q658P3 488 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 RPTNQ6XPR3 784 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 OSTM1Q86WC4 334 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 FAM168AQ92567 244 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 ZNF552Q9H707 407 aaPredicted RBP4.74□□□□□ -1.65
SRP54-209ENST00000555746 CABP5Q9NP86 173 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 PCDH12Q9NPG4 1184 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 DSEQ9UL01 958 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 SRPK3Q9UPE1 567 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 NUB1Q9Y5A7 615 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 COL4A3BPQ9Y5P4 624 aa4.74□□□□□ -1.65
SRP54-209ENST00000555746 CARMIL2Q6F5E8 1435 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 TCRBV5S2A0A599 114 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 NUDT19A8MXV4 375 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 F8W031 263 aaPredicted RBP4.73□□□□□ -1.65
SRP54-209ENST00000555746 MAN2B1O00754 1011 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 CLASP2O75122 1294 aaKnown RBP4.73□□□□□ -1.65
SRP54-209ENST00000555746 EYA4O95677 639 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 YBX3P16989 372 aaKnown RBP eCLIP4.73□□□□□ -1.65
SRP54-209ENST00000555746 HSPA2P54652 639 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 DSG1Q02413 1049 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 RAB3GAP1Q15042 981 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 PLEKHN1Q494U1 663 aaPredicted RBP4.73□□□□□ -1.65
SRP54-209ENST00000555746 ARHGAP36Q6ZRI8 547 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 DDX46Q7L014 1031 aaKnown RBP4.73□□□□□ -1.65
SRP54-209ENST00000555746 NOSTRINQ8IVI9 506 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 NLGN4XQ8N0W4 816 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 CISD2Q8N5K1 135 aaKnown RBP4.73□□□□□ -1.65
SRP54-209ENST00000555746 C2orf69Q8N8R5 385 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 TTLL11Q8NHH1 800 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 MYOTQ9UBF9 498 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 ASH2LQ9UBL3 628 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 PALD1Q9ULE6 856 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 NOP58Q9Y2X3 529 aaKnown RBP4.73□□□□□ -1.65
SRP54-209ENST00000555746 SIT1Q9Y3P8 196 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 CFTRP13569 1480 aa4.73□□□□□ -1.65
SRP54-209ENST00000555746 PPRC1Q5VV67 1664 aaKnown RBP4.73□□□□□ -1.65
SRP54-209ENST00000555746 TARBP1Q13395 1621 aaKnown RBP4.72□□□□□ -1.65
SRP54-209ENST00000555746 SLC12A8A0AV02 714 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 ZBTB48P10074 688 aaPredicted RBP4.72□□□□□ -1.65
SRP54-209ENST00000555746 BPIP17213 487 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 IBSPP21815 317 aaPredicted RBP4.72□□□□□ -1.65
SRP54-209ENST00000555746 SDHBP21912 280 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 PDE6BP35913 854 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 OLFML2BQ68BL8 750 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 CREB3L3Q68CJ9 461 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 ZC3H14Q6PJT7 736 aaKnown RBP4.72□□□□□ -1.65
SRP54-209ENST00000555746 KCTD1Q719H9 257 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 STRA8Q7Z7C7 330 aa4.72□□□□□ -1.65
SRP54-209ENST00000555746 MIB1Q86YT6 1006 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms