RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 PDE6BP35913 854 aa18.77■□□□□ 0.6
PPP4R3A-208ENST00000555462 CENPPQ6IPU0 288 aa18.77■□□□□ 0.6
PPP4R3A-208ENST00000555462 TEX11Q8IYF3 940 aa18.77■□□□□ 0.6
PPP4R3A-208ENST00000555462 SPAG5Q96R06 1193 aa18.77■□□□□ 0.6
PPP4R3A-208ENST00000555462 NEUROG2Q9H2A3 272 aa18.77■□□□□ 0.6
PPP4R3A-208ENST00000555462 HGSNATQ68CP4 663 aa18.77■□□□□ 0.59
PPP4R3A-208ENST00000555462 MXD3Q9BW11 206 aa18.77■□□□□ 0.59
PPP4R3A-208ENST00000555462 PANK4Q9NVE7 773 aa18.77■□□□□ 0.59
PPP4R3A-208ENST00000555462 BTDP43251 543 aa18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 E2F5Q15329 346 aa18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 MMS22LQ6ZRQ5 1243 aa18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 C7orf25Q9BPX7 421 aa18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 MTA3Q9BTC8 594 aa18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 GOLGA8KD6RF30 607 aa18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 RIMBP2O15034 1052 aa18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 CASP5P51878 434 aa18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 DHX9Q08211 1270 aaKnown RBP18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 PLS1Q14651 629 aa18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 MYOCDQ8IZQ8 938 aa18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 LINC00116Q8NCU8 138 aa18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 TAF4BQ92750 862 aa18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 SETDB2Q96T68 719 aa18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 DAPK3O43293 454 aa18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 NOL4O94818 638 aa18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 CCT8L2Q96SF2 557 aa18.76■□□□□ 0.59
PPP4R3A-208ENST00000555462 PHF20L1A8MW92 1017 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 CTNNA1P35221 906 aaKnown RBP18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 ERVK-9P63128 1117 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 KCNA1Q09470 495 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 COASYQ13057 564 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 ZNF211Q13398 564 aaPredicted RBP18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 SF3B2Q13435 895 aaKnown RBP18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 LRRC55Q6ZSA7 311 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 DGKHQ86XP1 1220 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 RDH13Q8NBN7 331 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 RETREG2Q8NC44 543 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 SCLT1Q96NL6 688 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 CCDC113Q9H0I3 377 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 RTCBQ9Y3I0 505 aaKnown RBP18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 DUOX1Q9NRD9 1551 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 POTEFA5A3E0 1075 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 POTEIP0CG38 1075 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 PTK2Q05397 1052 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 PABPC4Q13310 644 aaKnown RBP eCLIP18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 ADAM9Q13443 819 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 QPCTQ16769 361 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 POTEGQ6S5H5 508 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 POTEEQ6S8J3 1075 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 PIK3R5Q8WYR1 880 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 TSG101Q99816 390 aa18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 NOVA2Q9UNW9 492 aaKnown RBP18.75■□□□□ 0.59
PPP4R3A-208ENST00000555462 PALM3A6NDB9 673 aaPredicted RBP18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 FGRP09769 529 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 FAM26FQ5R3K3 315 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 KRT25Q7Z3Z0 450 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 ELMO3Q96BJ8 720 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 TRIM51Q9BSJ1 452 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 ZNF652Q9Y2D9 606 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 NR2E1Q9Y466 385 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 PCDHB13Q9Y5F0 798 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 GNPATO15228 680 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 BUB1BO60566 1050 aaPredicted RBP18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 GUCY2CP25092 1073 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 CCDC84Q86UT8 332 aaPredicted RBP18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 ZSCAN29Q8IWY8 852 aaPredicted RBP18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 ZNF473Q8WTR7 871 aaKnown RBP18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 SH3GL2Q99962 352 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 ADAMTSL3P82987 1691 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 MYH3P11055 1940 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 GRID2IPA4D2P6 1211 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 TMEM110-MUSTN1A8MSY1 372 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 SHOX2O60902 331 aaPredicted RBP18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 GNA11P29992 359 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 TMEM266Q2M3C6 531 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 AADACL2Q6P093 401 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 GPBP1Q86WP2 473 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 ZMYND12Q9H0C1 365 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 COL4A3BPQ9Y5P4 624 aa18.74■□□□□ 0.59
PPP4R3A-208ENST00000555462 SLCO1A2P46721 670 aa18.73■□□□□ 0.59
PPP4R3A-208ENST00000555462 CACNB3P54284 484 aa18.73■□□□□ 0.59
PPP4R3A-208ENST00000555462 PSMC6P62333 389 aa18.73■□□□□ 0.59
PPP4R3A-208ENST00000555462 DPP8Q6V1X1 898 aaPredicted RBP18.73■□□□□ 0.59
PPP4R3A-208ENST00000555462 UNC13DQ70J99 1090 aa18.73■□□□□ 0.59
PPP4R3A-208ENST00000555462 TOGARAM1Q9Y4F4 1720 aa18.73■□□□□ 0.59
PPP4R3A-208ENST00000555462 PAK2Q13177 524 aa18.73■□□□□ 0.59
PPP4R3A-208ENST00000555462 RPS6KA1Q15418 735 aa18.73■□□□□ 0.59
PPP4R3A-208ENST00000555462 EMBQ6PCB8 327 aa18.73■□□□□ 0.59
PPP4R3A-208ENST00000555462 BCL9LQ86UU0 1499 aa18.73■□□□□ 0.59
PPP4R3A-208ENST00000555462 GOLGA6L10A6NI86 522 aa18.72■□□□□ 0.59
PPP4R3A-208ENST00000555462 TTI1O43156 1089 aa18.72■□□□□ 0.59
PPP4R3A-208ENST00000555462 GNAQP50148 359 aa18.72■□□□□ 0.59
PPP4R3A-208ENST00000555462 RAD54LQ92698 747 aa18.72■□□□□ 0.59
PPP4R3A-208ENST00000555462 ATP8A1Q9Y2Q0 1164 aa18.72■□□□□ 0.59
PPP4R3A-208ENST00000555462 RSPH10B2B2RC85 870 aa18.72■□□□□ 0.59
PPP4R3A-208ENST00000555462 RSPH10BP0C881 870 aa18.72■□□□□ 0.59
PPP4R3A-208ENST00000555462 ADCY1Q08828 1119 aa18.72■□□□□ 0.59
PPP4R3A-208ENST00000555462 UBAP2Q5T6F2 1119 aaKnown RBP18.72■□□□□ 0.59
PPP4R3A-208ENST00000555462 NLRP14Q86W24 1093 aa18.72■□□□□ 0.59
PPP4R3A-208ENST00000555462 FBXL5Q9UKA1 691 aa18.72■□□□□ 0.59
PPP4R3A-208ENST00000555462 PCDHA12Q9UN75 941 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms