RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 NOP56O00567 594 aaKnown RBP16.07■□□□□ 0.16
DDX54-210ENST00000552375 DTNBO60941 627 aa16.07■□□□□ 0.16
DDX54-210ENST00000552375 IQCF3P0C7M6 154 aa16.07■□□□□ 0.16
DDX54-210ENST00000552375 PBX2P40425 430 aa16.07■□□□□ 0.16
DDX54-210ENST00000552375 PPP1R18Q6NYC8 613 aa16.07■□□□□ 0.16
DDX54-210ENST00000552375 DEFB128Q7Z7B8 93 aa16.07■□□□□ 0.16
DDX54-210ENST00000552375 SLC17A8Q8NDX2 589 aa16.07■□□□□ 0.16
DDX54-210ENST00000552375 MYLIPQ8WY64 445 aa16.07■□□□□ 0.16
DDX54-210ENST00000552375 DHX38Q92620 1227 aaKnown RBP16.07■□□□□ 0.16
DDX54-210ENST00000552375 ALG1Q9BT22 464 aa16.07■□□□□ 0.16
DDX54-210ENST00000552375 ZNF576Q9H609 170 aa16.07■□□□□ 0.16
DDX54-210ENST00000552375 TANC1Q9C0D5 1861 aa16.07■□□□□ 0.16
DDX54-210ENST00000552375 CHD9Q3L8U1 2897 aa16.07■□□□□ 0.16
DDX54-210ENST00000552375 ZBBXA8MT70 800 aa16.06■□□□□ 0.16
DDX54-210ENST00000552375 LGALS2P05162 132 aa16.06■□□□□ 0.16
DDX54-210ENST00000552375 FOSL2P15408 326 aa16.06■□□□□ 0.16
DDX54-210ENST00000552375 PDIA3P30101 505 aaKnown RBP16.06■□□□□ 0.16
DDX54-210ENST00000552375 NAPAP54920 295 aa16.06■□□□□ 0.16
DDX54-210ENST00000552375 TYW1BQ6NUM6 668 aa16.06■□□□□ 0.16
DDX54-210ENST00000552375 NLRX1Q86UT6 975 aa16.06■□□□□ 0.16
DDX54-210ENST00000552375 TEX2Q8IWB9 1127 aa16.06■□□□□ 0.16
DDX54-210ENST00000552375 SENP7Q9BQF6 1050 aa16.06■□□□□ 0.16
DDX54-210ENST00000552375 C16orf70Q9BSU1 422 aa16.06■□□□□ 0.16
DDX54-210ENST00000552375 RTEL1Q9NZ71 1219 aa16.06■□□□□ 0.16
DDX54-210ENST00000552375 SLC4A7Q9Y6M7 1214 aa16.06■□□□□ 0.16
DDX54-210ENST00000552375 V9GY48 417 aaPredicted RBP16.06■□□□□ 0.16
DDX54-210ENST00000552375 SPDYE3A6NKU9 549 aa16.05■□□□□ 0.16
DDX54-210ENST00000552375 hCG_1984214I3L0E3 225 aa16.05■□□□□ 0.16
DDX54-210ENST00000552375 ACTN1P12814 892 aa16.05■□□□□ 0.16
DDX54-210ENST00000552375 SELPP16109 830 aa16.05■□□□□ 0.16
DDX54-210ENST00000552375 AK2P54819 239 aa16.05■□□□□ 0.16
DDX54-210ENST00000552375 ANAPC15P60006 121 aa16.05■□□□□ 0.16
DDX54-210ENST00000552375 PTK7Q13308 1070 aa16.05■□□□□ 0.16
DDX54-210ENST00000552375 GRIN2CQ14957 1233 aa16.05■□□□□ 0.16
DDX54-210ENST00000552375 LRRC8DQ7L1W4 858 aa16.05■□□□□ 0.16
DDX54-210ENST00000552375 CYFIP1Q7L576 1253 aa16.05■□□□□ 0.16
DDX54-210ENST00000552375 ZNF713Q8N859 430 aaPredicted RBP16.05■□□□□ 0.16
DDX54-210ENST00000552375 GPRASP2Q96D09 838 aa16.05■□□□□ 0.16
DDX54-210ENST00000552375 CDHR1Q96JP9 859 aa16.05■□□□□ 0.16
DDX54-210ENST00000552375 GPR20Q99678 358 aa16.05■□□□□ 0.16
DDX54-210ENST00000552375 SLC26A6Q9BXS9 759 aa16.05■□□□□ 0.16
DDX54-210ENST00000552375 MSRAQ9UJ68 235 aa16.05■□□□□ 0.16
DDX54-210ENST00000552375 STXBP3O00186 592 aa16.04■□□□□ 0.16
DDX54-210ENST00000552375 ATP2A2P16615 1042 aaKnown RBP16.04■□□□□ 0.16
DDX54-210ENST00000552375 HOXC8P31273 242 aa16.04■□□□□ 0.16
DDX54-210ENST00000552375 TRIM71Q2Q1W2 868 aaKnown RBP16.04■□□□□ 0.16
DDX54-210ENST00000552375 FBXL16Q8N461 479 aa16.04■□□□□ 0.16
DDX54-210ENST00000552375 MAFAQ8NHW3 353 aaPredicted RBP16.04■□□□□ 0.16
DDX54-210ENST00000552375 PGBD1Q96JS3 809 aa16.04■□□□□ 0.16
DDX54-210ENST00000552375 BCAS3Q9H6U6 928 aa16.04■□□□□ 0.16
DDX54-210ENST00000552375 EHMT1Q9H9B1 1298 aa16.04■□□□□ 0.16
DDX54-210ENST00000552375 YBX2Q9Y2T7 364 aaKnown RBP16.04■□□□□ 0.16
DDX54-210ENST00000552375 VCANP13611 3396 aa16.04■□□□□ 0.16
DDX54-210ENST00000552375 CHD7Q9P2D1 2997 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 CCDC196A0A1B0GTZ2 297 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 H3BRB1 525 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 EIF5BO60841 1220 aaKnown RBP16.03■□□□□ 0.16
DDX54-210ENST00000552375 BAIAP3O94812 1187 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 PARNO95453 639 aaKnown RBP16.03■□□□□ 0.16
DDX54-210ENST00000552375 LARGE1O95461 756 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 CKBP12277 381 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 KCNA2P16389 499 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 ITGB5P18084 799 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 HIC1Q14526 733 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 TRIM50Q86XT4 487 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 GIMAP8Q8ND71 665 aaPredicted RBP16.03■□□□□ 0.16
DDX54-210ENST00000552375 WNT8BQ93098 351 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 SLC9A7Q96T83 725 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 FTOQ9C0B1 505 aaKnown RBP eCLIP16.03■□□□□ 0.16
DDX54-210ENST00000552375 TUT1Q9H6E5 874 aaKnown RBP16.03■□□□□ 0.16
DDX54-210ENST00000552375 RIC8AQ9NPQ8 531 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 BARHL2Q9NY43 387 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 ZNF215Q9UL58 517 aaPredicted RBP16.03■□□□□ 0.16
DDX54-210ENST00000552375 TPCN1Q9ULQ1 816 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 PCDHA6Q9UN73 950 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 PCDHA8Q9Y5H6 950 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 UBIAD1Q9Y5Z9 338 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 PRUNE2Q8WUY3 3088 aa16.03■□□□□ 0.16
DDX54-210ENST00000552375 SPTBN5Q9NRC6 3674 aaKnown RBP16.02■□□□□ 0.16
DDX54-210ENST00000552375 C17orf102A2RUQ5 167 aa16.02■□□□□ 0.16
DDX54-210ENST00000552375 CXCL10P02778 98 aa16.02■□□□□ 0.16
DDX54-210ENST00000552375 SMIM10L2AP0DMW4 78 aa16.02■□□□□ 0.16
DDX54-210ENST00000552375 SMIM10L2BP0DMW5 78 aa16.02■□□□□ 0.16
DDX54-210ENST00000552375 SCG2P13521 617 aa16.02■□□□□ 0.16
DDX54-210ENST00000552375 ADCY7P51828 1080 aa16.02■□□□□ 0.16
DDX54-210ENST00000552375 NEK4P51957 841 aa16.02■□□□□ 0.16
DDX54-210ENST00000552375 ZNF200P98182 395 aaPredicted RBP16.02■□□□□ 0.16
DDX54-210ENST00000552375 AKAP17AQ02040 695 aaKnown RBP16.02■□□□□ 0.16
DDX54-210ENST00000552375 SP4Q02446 784 aa16.02■□□□□ 0.16
DDX54-210ENST00000552375 MTMR1Q13613 665 aa16.02■□□□□ 0.16
DDX54-210ENST00000552375 NTRK3Q16288 839 aa16.02■□□□□ 0.16
DDX54-210ENST00000552375 TRAF7Q6Q0C0 670 aa16.02■□□□□ 0.16
DDX54-210ENST00000552375 SERINC5Q86VE9 423 aa16.02■□□□□ 0.16
DDX54-210ENST00000552375 NKX2-4Q9H2Z4 354 aa16.02■□□□□ 0.16
DDX54-210ENST00000552375 TMEM260Q9NX78 707 aa16.02■□□□□ 0.16
DDX54-210ENST00000552375 PCDHA11Q9Y5I1 949 aa16.02■□□□□ 0.16
DDX54-210ENST00000552375 CPLX1O14810 134 aa16.01■□□□□ 0.15
DDX54-210ENST00000552375 NBNO60934 754 aa16.01■□□□□ 0.15
DDX54-210ENST00000552375 RABGGTBP53611 331 aa16.01■□□□□ 0.15
DDX54-210ENST00000552375 EVCP57679 992 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 200 ms