RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 KAT2BQ92831 832 aa21.77■■□□□ 1.08
DDX55-211ENST00000544429 MBOAT7Q96N66 472 aa21.77■■□□□ 1.08
DDX55-211ENST00000544429 TOX2Q96NM4 488 aa21.77■■□□□ 1.08
DDX55-211ENST00000544429 GPR20Q99678 358 aa21.77■■□□□ 1.08
DDX55-211ENST00000544429 SEZ6LQ9BYH1 1024 aa21.77■■□□□ 1.08
DDX55-211ENST00000544429 MLXIPQ9HAP2 919 aa21.77■■□□□ 1.08
DDX55-211ENST00000544429 TELO2Q9Y4R8 837 aa21.77■■□□□ 1.08
DDX55-211ENST00000544429 ARVCFO00192 962 aa21.76■■□□□ 1.07
DDX55-211ENST00000544429 F2P00734 622 aa21.76■■□□□ 1.07
DDX55-211ENST00000544429 SETQ01105 290 aaPredicted RBP21.76■■□□□ 1.07
DDX55-211ENST00000544429 NR5A1Q13285 461 aa21.76■■□□□ 1.07
DDX55-211ENST00000544429 ITGB3BPQ13352 177 aaPredicted RBP21.76■■□□□ 1.07
DDX55-211ENST00000544429 NONOQ15233 471 aaKnown RBP eCLIP21.76■■□□□ 1.07
DDX55-211ENST00000544429 EARS2Q5JPH6 523 aaKnown RBP21.76■■□□□ 1.07
DDX55-211ENST00000544429 FBXO18Q8NFZ0 1043 aa21.76■■□□□ 1.07
DDX55-211ENST00000544429 HAS3O00219 553 aa21.75■■□□□ 1.07
DDX55-211ENST00000544429 DHX15O43143 795 aaKnown RBP21.75■■□□□ 1.07
DDX55-211ENST00000544429 MYL3P08590 195 aa21.75■■□□□ 1.07
DDX55-211ENST00000544429 KRT2P35908 639 aa21.75■■□□□ 1.07
DDX55-211ENST00000544429 ZNF76P36508 570 aa21.75■■□□□ 1.07
DDX55-211ENST00000544429 ITGA7Q13683 1181 aa21.75■■□□□ 1.07
DDX55-211ENST00000544429 PLA2G4DQ86XP0 818 aa21.75■■□□□ 1.07
DDX55-211ENST00000544429 C16orf70Q9BSU1 422 aa21.75■■□□□ 1.07
DDX55-211ENST00000544429 LTBP2Q14767 1821 aa21.75■■□□□ 1.07
DDX55-211ENST00000544429 BTBD18B2RXH4 712 aa21.74■■□□□ 1.07
DDX55-211ENST00000544429 SORBS3O60504 671 aa21.74■■□□□ 1.07
DDX55-211ENST00000544429 PSMC6P62333 389 aa21.74■■□□□ 1.07
DDX55-211ENST00000544429 TLE2Q04725 743 aa21.74■■□□□ 1.07
DDX55-211ENST00000544429 TRIM29Q14134 588 aa21.74■■□□□ 1.07
DDX55-211ENST00000544429 Q4G0T1 1027 aa21.74■■□□□ 1.07
DDX55-211ENST00000544429 FAM126BQ8IXS8 530 aa21.74■■□□□ 1.07
DDX55-211ENST00000544429 DIS3L2Q8IYB7 885 aaKnown RBP21.74■■□□□ 1.07
DDX55-211ENST00000544429 C7orf61Q8IZ16 206 aa21.74■■□□□ 1.07
DDX55-211ENST00000544429 SNX21Q969T3 373 aa21.74■■□□□ 1.07
DDX55-211ENST00000544429 C8orf76Q96K31 380 aa21.74■■□□□ 1.07
DDX55-211ENST00000544429 NR2E3Q9Y5X4 410 aa21.74■■□□□ 1.07
DDX55-211ENST00000544429 WDR81Q562E7 1941 aa21.74■■□□□ 1.07
DDX55-211ENST00000544429 MROH7Q68CQ1 1323 aa21.74■■□□□ 1.07
DDX55-211ENST00000544429 CCDC194A0A1B0GVG4 234 aa21.73■■□□□ 1.07
DDX55-211ENST00000544429 IPO5O00410 1097 aaKnown RBP21.73■■□□□ 1.07
DDX55-211ENST00000544429 CD4P01730 458 aa21.73■■□□□ 1.07
DDX55-211ENST00000544429 INF2Q27J81 1249 aa21.73■■□□□ 1.07
DDX55-211ENST00000544429 PRR16Q569H4 304 aa21.73■■□□□ 1.07
DDX55-211ENST00000544429 NFRKBQ6P4R8 1299 aa21.73■■□□□ 1.07
DDX55-211ENST00000544429 PIK3AP1Q6ZUJ8 805 aa21.73■■□□□ 1.07
DDX55-211ENST00000544429 SESTD1Q86VW0 696 aa21.73■■□□□ 1.07
DDX55-211ENST00000544429 BRMS1Q9HCU9 246 aa21.73■■□□□ 1.07
DDX55-211ENST00000544429 ATP11BQ9Y2G3 1177 aa21.73■■□□□ 1.07
DDX55-211ENST00000544429 GSTTP1A0A1W2PQM5 241 aa21.72■■□□□ 1.07
DDX55-211ENST00000544429 FAM205CA6NFA0 338 aa21.72■■□□□ 1.07
DDX55-211ENST00000544429 TDP2O95551 362 aa21.72■■□□□ 1.07
DDX55-211ENST00000544429 FAAP100Q0VG06 881 aa21.72■■□□□ 1.07
DDX55-211ENST00000544429 NBPF20Q3BBV1 942 aa21.72■■□□□ 1.07
DDX55-211ENST00000544429 PPP4R3AQ6IN85 833 aa21.72■■□□□ 1.07
DDX55-211ENST00000544429 NEK8Q86SG6 692 aa21.72■■□□□ 1.07
DDX55-211ENST00000544429 FAM184AQ8NB25 1140 aa21.72■■□□□ 1.07
DDX55-211ENST00000544429 JPH1Q9HDC5 661 aaPredicted RBP21.72■■□□□ 1.07
DDX55-211ENST00000544429 PDLIM7Q9NR12 457 aa21.72■■□□□ 1.07
DDX55-211ENST00000544429 SLC9A2Q9UBY0 812 aa21.72■■□□□ 1.07
DDX55-211ENST00000544429 H0YGN5 161 aa21.71■■□□□ 1.07
DDX55-211ENST00000544429 NOP56O00567 594 aaKnown RBP21.71■■□□□ 1.07
DDX55-211ENST00000544429 ATG7O95352 703 aa21.71■■□□□ 1.07
DDX55-211ENST00000544429 LGALS2P05162 132 aa21.71■■□□□ 1.07
DDX55-211ENST00000544429 ZNF286BP0CG31 522 aa21.71■■□□□ 1.07
DDX55-211ENST00000544429 FOSBP53539 338 aa21.71■■□□□ 1.07
DDX55-211ENST00000544429 GUCY1B3Q02153 619 aa21.71■■□□□ 1.07
DDX55-211ENST00000544429 PTPN11Q06124 597 aaPredicted RBP21.71■■□□□ 1.07
DDX55-211ENST00000544429 VTI1AQ96AJ9 217 aa21.71■■□□□ 1.07
DDX55-211ENST00000544429 FOXP1Q9H334 677 aaPredicted RBP21.71■■□□□ 1.07
DDX55-211ENST00000544429 PKD2L1Q9P0L9 805 aa21.71■■□□□ 1.07
DDX55-211ENST00000544429 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.71■■□□□ 1.07
DDX55-211ENST00000544429 RANBP2P49792 3224 aaKnown RBP21.7■■□□□ 1.06
DDX55-211ENST00000544429 MSH4O15457 936 aa21.7■■□□□ 1.06
DDX55-211ENST00000544429 PQBP1O60828 265 aaKnown RBP21.7■■□□□ 1.06
DDX55-211ENST00000544429 CCNE2O96020 404 aa21.7■■□□□ 1.06
DDX55-211ENST00000544429 GCFC2P16383 781 aaKnown RBP21.7■■□□□ 1.06
DDX55-211ENST00000544429 GJB2P29033 226 aa21.7■■□□□ 1.06
DDX55-211ENST00000544429 PRPF38BQ5VTL8 546 aaKnown RBP21.7■■□□□ 1.06
DDX55-211ENST00000544429 ETNPPLQ8TBG4 499 aa21.7■■□□□ 1.06
DDX55-211ENST00000544429 SEPT1Q8WYJ6 367 aa21.7■■□□□ 1.06
DDX55-211ENST00000544429 SLC5A5Q92911 643 aa21.7■■□□□ 1.06
DDX55-211ENST00000544429 SDF4Q9BRK5 362 aa21.7■■□□□ 1.06
DDX55-211ENST00000544429 ZNF577Q9BSK1 485 aa21.7■■□□□ 1.06
DDX55-211ENST00000544429 KATNAL1Q9BW62 490 aa21.7■■□□□ 1.06
DDX55-211ENST00000544429 TBC1D22BQ9NU19 505 aa21.7■■□□□ 1.06
DDX55-211ENST00000544429 TBX21Q9UL17 535 aa21.7■■□□□ 1.06
DDX55-211ENST00000544429 TRIP12Q14669 1992 aaPredicted RBP21.69■■□□□ 1.06
DDX55-211ENST00000544429 IGKV6D-21A0A0A0MT36 114 aa21.69■■□□□ 1.06
DDX55-211ENST00000544429 K7ELQ4 463 aaPredicted RBP21.69■■□□□ 1.06
DDX55-211ENST00000544429 KIAA0355O15063 1070 aa21.69■■□□□ 1.06
DDX55-211ENST00000544429 LGR5O75473 907 aa21.69■■□□□ 1.06
DDX55-211ENST00000544429 CLTBP09497 229 aa21.69■■□□□ 1.06
DDX55-211ENST00000544429 U2AF2P26368 475 aaKnown RBP eCLIP21.69■■□□□ 1.06
DDX55-211ENST00000544429 HOXC8P31273 242 aa21.69■■□□□ 1.06
DDX55-211ENST00000544429 TCF7P36402 384 aaPredicted RBP21.69■■□□□ 1.06
DDX55-211ENST00000544429 PSEN2P49810 448 aa21.69■■□□□ 1.06
DDX55-211ENST00000544429 ACTR2P61160 394 aa21.69■■□□□ 1.06
DDX55-211ENST00000544429 B3GNT9Q6UX72 402 aa21.69■■□□□ 1.06
DDX55-211ENST00000544429 INTS4Q96HW7 963 aaKnown RBP21.69■■□□□ 1.06
DDX55-211ENST00000544429 PCYT2Q99447 389 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms