RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 EEPD1Q7L9B9 569 aa8.49□□□□□ -1.05
CCDC7-209ENST00000539197 PIP4K2CQ8TBX8 421 aa8.49□□□□□ -1.05
CCDC7-209ENST00000539197 PHOSPHO1Q8TCT1 267 aa8.49□□□□□ -1.05
CCDC7-209ENST00000539197 IGDCC4Q8TDY8 1250 aa8.49□□□□□ -1.05
CCDC7-209ENST00000539197 SMOC1Q9H4F8 434 aa8.49□□□□□ -1.05
CCDC7-209ENST00000539197 NPEPPSL1A6NEC2 478 aa8.48□□□□□ -1.05
CCDC7-209ENST00000539197 AGRPO00253 132 aa8.48□□□□□ -1.05
CCDC7-209ENST00000539197 SLC27A2O14975 620 aa8.48□□□□□ -1.05
CCDC7-209ENST00000539197 DLX3O60479 287 aa8.48□□□□□ -1.05
CCDC7-209ENST00000539197 PROSER1Q86XN7 944 aa8.48□□□□□ -1.05
CCDC7-209ENST00000539197 MCF2L2Q86YR7 1114 aa8.48□□□□□ -1.05
CCDC7-209ENST00000539197 CLEC4DQ8WXI8 215 aa8.48□□□□□ -1.05
CCDC7-209ENST00000539197 KISS1RQ969F8 398 aaPredicted RBP8.48□□□□□ -1.05
CCDC7-209ENST00000539197 EPN3Q9H201 632 aa8.48□□□□□ -1.05
CCDC7-209ENST00000539197 ASH2LQ9UBL3 628 aa8.48□□□□□ -1.05
CCDC7-209ENST00000539197 FTSJ1Q9UET6 329 aa8.48□□□□□ -1.05
CCDC7-209ENST00000539197 KRIT1O00522 736 aa8.47□□□□□ -1.05
CCDC7-209ENST00000539197 AKAP8O43823 692 aaKnown RBP8.47□□□□□ -1.05
CCDC7-209ENST00000539197 GNL2Q13823 731 aaKnown RBP8.47□□□□□ -1.05
CCDC7-209ENST00000539197 PKN3Q6P5Z2 889 aa8.47□□□□□ -1.05
CCDC7-209ENST00000539197 USP53Q70EK8 1073 aa8.47□□□□□ -1.05
CCDC7-209ENST00000539197 KCTD13Q8WZ19 329 aa8.47□□□□□ -1.05
CCDC7-209ENST00000539197 TINF2Q9BSI4 451 aa8.47□□□□□ -1.05
CCDC7-209ENST00000539197 GPR42O15529 346 aa8.46□□□□□ -1.06
CCDC7-209ENST00000539197 LTFP02788 710 aa8.46□□□□□ -1.06
CCDC7-209ENST00000539197 COL6A1P12109 1028 aa8.46□□□□□ -1.06
CCDC7-209ENST00000539197 MAP4K2Q12851 820 aa8.46□□□□□ -1.06
CCDC7-209ENST00000539197 CDSNQ15517 529 aa8.46□□□□□ -1.06
CCDC7-209ENST00000539197 CYP4F22Q6NT55 531 aa8.46□□□□□ -1.06
CCDC7-209ENST00000539197 TRMT10BQ6PF06 316 aaKnown RBP8.46□□□□□ -1.06
CCDC7-209ENST00000539197 ARHGEF18Q6ZSZ5 1173 aa8.46□□□□□ -1.06
CCDC7-209ENST00000539197 SPRED1Q7Z699 444 aa8.46□□□□□ -1.06
CCDC7-209ENST00000539197 KBTBD2Q8IY47 623 aa8.46□□□□□ -1.06
CCDC7-209ENST00000539197 PHF20Q9BVI0 1012 aa8.46□□□□□ -1.06
CCDC7-209ENST00000539197 JADE2Q9NQC1 790 aa8.46□□□□□ -1.06
CCDC7-209ENST00000539197 COL6A2P12110 1019 aa8.45□□□□□ -1.06
CCDC7-209ENST00000539197 EPHB4P54760 987 aa8.45□□□□□ -1.06
CCDC7-209ENST00000539197 PPP2CBP62714 309 aa8.45□□□□□ -1.06
CCDC7-209ENST00000539197 PPP2CAP67775 309 aa8.45□□□□□ -1.06
CCDC7-209ENST00000539197 KCNT2Q6UVM3 1135 aa8.45□□□□□ -1.06
CCDC7-209ENST00000539197 CIR1Q86X95 450 aaPredicted RBP8.45□□□□□ -1.06
CCDC7-209ENST00000539197 TRIM48Q8IWZ4 208 aa8.45□□□□□ -1.06
CCDC7-209ENST00000539197 KLHL36Q8N4N3 616 aa8.45□□□□□ -1.06
CCDC7-209ENST00000539197 BARX1Q9HBU1 254 aaPredicted RBP8.45□□□□□ -1.06
CCDC7-209ENST00000539197 SLC6A20Q9NP91 592 aa8.45□□□□□ -1.06
CCDC7-209ENST00000539197 HSPBP1Q9NZL4 362 aa8.45□□□□□ -1.06
CCDC7-209ENST00000539197 ZDHHC9Q9Y397 364 aa8.45□□□□□ -1.06
CCDC7-209ENST00000539197 TSC22D4Q9Y3Q8 395 aa8.45□□□□□ -1.06
CCDC7-209ENST00000539197 BLACEA4D250 179 aa8.44□□□□□ -1.06
CCDC7-209ENST00000539197 B4GALT4O60513 344 aa8.44□□□□□ -1.06
CCDC7-209ENST00000539197 NUDT10Q8NFP7 164 aa8.44□□□□□ -1.06
CCDC7-209ENST00000539197 SH3RF3Q8TEJ3 882 aaPredicted RBP8.44□□□□□ -1.06
CCDC7-209ENST00000539197 ZNF428Q96B54 188 aa8.44□□□□□ -1.06
CCDC7-209ENST00000539197 NUDT11Q96G61 164 aa8.44□□□□□ -1.06
CCDC7-209ENST00000539197 GPR27Q9NS67 375 aa8.44□□□□□ -1.06
CCDC7-209ENST00000539197 SRRDQ9UH36 339 aa8.44□□□□□ -1.06
CCDC7-209ENST00000539197 TELO2Q9Y4R8 837 aa8.44□□□□□ -1.06
CCDC7-209ENST00000539197 FSHBP01225 129 aa8.43□□□□□ -1.06
CCDC7-209ENST00000539197 NFATC3Q12968 1075 aa8.43□□□□□ -1.06
CCDC7-209ENST00000539197 NTRK3Q16288 839 aa8.43□□□□□ -1.06
CCDC7-209ENST00000539197 TTLL11Q8NHH1 800 aa8.43□□□□□ -1.06
CCDC7-209ENST00000539197 CDK5RAP1Q96SZ6 601 aaKnown RBP8.43□□□□□ -1.06
CCDC7-209ENST00000539197 KCNJ15Q99712 375 aa8.43□□□□□ -1.06
CCDC7-209ENST00000539197 CD248Q9HCU0 757 aa8.43□□□□□ -1.06
CCDC7-209ENST00000539197 TCF3P15923 654 aa8.42□□□□□ -1.06
CCDC7-209ENST00000539197 DNAJA1P31689 397 aaKnown RBP8.42□□□□□ -1.06
CCDC7-209ENST00000539197 ARID5AQ03989 594 aa8.42□□□□□ -1.06
CCDC7-209ENST00000539197 ZNF585AQ6P3V2 769 aa8.42□□□□□ -1.06
CCDC7-209ENST00000539197 ANKS3Q6ZW76 656 aa8.42□□□□□ -1.06
CCDC7-209ENST00000539197 OTOP3Q7RTS5 596 aa8.42□□□□□ -1.06
CCDC7-209ENST00000539197 SLC16A11Q8NCK7 471 aa8.42□□□□□ -1.06
CCDC7-209ENST00000539197 KLC2Q9H0B6 622 aa8.42□□□□□ -1.06
CCDC7-209ENST00000539197 R3HCC1Q9Y3T6 440 aaKnown RBP8.42□□□□□ -1.06
CCDC7-209ENST00000539197 NKRFO15226 690 aaKnown RBP eCLIP8.41□□□□□ -1.06
CCDC7-209ENST00000539197 PRODHO43272 600 aa8.41□□□□□ -1.06
CCDC7-209ENST00000539197 TUSC3Q13454 348 aa8.41□□□□□ -1.06
CCDC7-209ENST00000539197 DDR2Q16832 855 aa8.41□□□□□ -1.06
CCDC7-209ENST00000539197 YOD1Q5VVQ6 348 aaPredicted RBP8.41□□□□□ -1.06
CCDC7-209ENST00000539197 SLFN13Q68D06 897 aa8.41□□□□□ -1.06
CCDC7-209ENST00000539197 VASNQ6EMK4 673 aa8.41□□□□□ -1.06
CCDC7-209ENST00000539197 HOMEZQ8IX15 550 aa8.41□□□□□ -1.06
CCDC7-209ENST00000539197 DTX3Q8N9I9 347 aa8.41□□□□□ -1.06
CCDC7-209ENST00000539197 DEF6Q9H4E7 631 aa8.41□□□□□ -1.06
CCDC7-209ENST00000539197 DLL4Q9NR61 685 aa8.41□□□□□ -1.06
CCDC7-209ENST00000539197 ARHGEF4Q9NR80 690 aa8.41□□□□□ -1.06
CCDC7-209ENST00000539197 KLHL18O94889 574 aa8.4□□□□□ -1.06
CCDC7-209ENST00000539197 CKMP06732 381 aa8.4□□□□□ -1.06
CCDC7-209ENST00000539197 C6P13671 934 aa8.4□□□□□ -1.06
CCDC7-209ENST00000539197 RSPO2Q6UXX9 243 aaPredicted RBP8.4□□□□□ -1.06
CCDC7-209ENST00000539197 DNERQ8NFT8 737 aa8.4□□□□□ -1.06
CCDC7-209ENST00000539197 WWC2-AS2Q96NR7 200 aa8.4□□□□□ -1.06
CCDC7-209ENST00000539197 KRTAP17-1Q9BYP8 105 aa8.4□□□□□ -1.06
CCDC7-209ENST00000539197 SCAND2PQ9GZW5 306 aaPredicted RBP8.4□□□□□ -1.06
CCDC7-209ENST00000539197 TACR2P21452 398 aa8.39□□□□□ -1.07
CCDC7-209ENST00000539197 GRK2P25098 689 aa8.39□□□□□ -1.07
CCDC7-209ENST00000539197 GRK3P35626 688 aa8.39□□□□□ -1.07
CCDC7-209ENST00000539197 GLRBP48167 497 aa8.39□□□□□ -1.07
CCDC7-209ENST00000539197 HSP90AA2PQ14568 343 aaPredicted RBP8.39□□□□□ -1.07
CCDC7-209ENST00000539197 LBX2Q6XYB7 198 aa8.39□□□□□ -1.07
CCDC7-209ENST00000539197 PALM2Q8IXS6 379 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms