RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 SLC12A3P55017 1021 aa16.81■□□□□ 0.28
USP35-204ENST00000530267 CYP27A1Q02318 531 aa16.81■□□□□ 0.28
USP35-204ENST00000530267 CXCL9Q07325 125 aa16.81■□□□□ 0.28
USP35-204ENST00000530267 BCAS3Q9H6U6 928 aa16.81■□□□□ 0.28
USP35-204ENST00000530267 NHEJ1Q9H9Q4 299 aaPredicted RBP16.81■□□□□ 0.28
USP35-204ENST00000530267 RGL1Q9NZL6 768 aa16.81■□□□□ 0.28
USP35-204ENST00000530267 ZNRF3Q9ULT6 936 aa16.81■□□□□ 0.28
USP35-204ENST00000530267 EFCAB8A8MWE9 144 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 EML1O00423 815 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 ZBED6P86452 979 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 SF3B2Q13435 895 aaKnown RBP16.8■□□□□ 0.28
USP35-204ENST00000530267 MAN2A1Q16706 1144 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 CCDC40Q4G0X9 1142 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 MOXD1Q6UVY6 613 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 SMCR8Q8TEV9 937 aaPredicted RBP16.8■□□□□ 0.28
USP35-204ENST00000530267 ERGIC2Q96RQ1 377 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 NUP58Q9BVL2 599 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 DNM3Q9UQ16 869 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 CTAGE9A4FU28 777 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 FGFR1OPO95684 399 aaKnown RBP16.8■□□□□ 0.28
USP35-204ENST00000530267 CASP5P51878 434 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 HERVK_113P62684 666 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 ERMNQ8TAM6 284 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 SCFD1Q8WVM8 642 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 PRDM10Q9NQV6 1147 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 ZNF446Q9NWS9 450 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 PCDHA2Q9Y5H9 948 aa16.8■□□□□ 0.28
USP35-204ENST00000530267 WNT10BO00744 389 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 ZBTB7AO95365 584 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 MMP14P50281 582 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 CLCN6P51797 869 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 DGKZQ13574 1117 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 KIAA1328Q86T90 577 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 BHMT2Q9H2M3 363 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 EMILIN3Q9NT22 766 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 RGPD3A6NKT7 1758 aaPredicted RBP16.79■□□□□ 0.28
USP35-204ENST00000530267 RGPD4Q7Z3J3 1758 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 ENC1O14682 589 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 EGFRP00533 1210 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 RPA1P27694 616 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 CAP2P40123 477 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 FKBP3Q00688 224 aaKnown RBP16.79■□□□□ 0.28
USP35-204ENST00000530267 CTTNQ14247 550 aaKnown RBP16.79■□□□□ 0.28
USP35-204ENST00000530267 MEA1Q16626 185 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 CCDC122Q5T0U0 273 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 RETREG2Q8NC44 543 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 PIGOQ8TEQ8 1089 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 WDR18Q9BV38 432 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 VCPKMTQ9H867 229 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 VAV3Q9UKW4 847 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 SIK3Q9Y2K2 1263 aa16.79■□□□□ 0.28
USP35-204ENST00000530267 COL2A1P02458 1487 aaPredicted RBP16.78■□□□□ 0.28
USP35-204ENST00000530267 RCCD1A6NED2 376 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 RSPH10B2B2RC85 870 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 RSPH10BP0C881 870 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 H2AFXP16104 143 aaPredicted RBP16.78■□□□□ 0.28
USP35-204ENST00000530267 ZCWPW2Q504Y3 356 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 KRT26Q7Z3Y9 468 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 FAM20AQ96MK3 541 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 FEZ1Q99689 392 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 EIF2AK1Q9BQI3 630 aaKnown RBP16.78■□□□□ 0.28
USP35-204ENST00000530267 REEP2Q9BRK0 252 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 CRACR2AQ9BSW2 395 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 COL4A3BPQ9Y5P4 624 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 DUSP10Q9Y6W6 482 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 SFI1A8K8P3 1242 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 GCOM1H8Y6P7 765 aaPredicted RBP16.78■□□□□ 0.28
USP35-204ENST00000530267 ZBTB39O15060 712 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 TBX3O15119 743 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 POLR2MP0CAP2 368 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 APBA1Q02410 837 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 GIT2Q14161 759 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 RRAGAQ7L523 313 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 SFR1Q86XK3 245 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 CHURC1Q8WUH1 139 aa16.78■□□□□ 0.28
USP35-204ENST00000530267 IGLV3-22A0A075B6J6 115 aa16.77■□□□□ 0.28
USP35-204ENST00000530267 CIITAP33076 1130 aa16.77■□□□□ 0.28
USP35-204ENST00000530267 BAG6P46379 1132 aa16.77■□□□□ 0.28
USP35-204ENST00000530267 MCTP2Q6DN12 878 aa16.77■□□□□ 0.28
USP35-204ENST00000530267 TPH2Q8IWU9 490 aa16.77■□□□□ 0.28
USP35-204ENST00000530267 NAPGQ99747 312 aaPredicted RBP16.77■□□□□ 0.28
USP35-204ENST00000530267 ZNF341Q9BYN7 854 aa16.77■□□□□ 0.28
USP35-204ENST00000530267 LACRTQ9GZZ8 138 aa16.77■□□□□ 0.28
USP35-204ENST00000530267 DDX41Q9UJV9 622 aaKnown RBP16.77■□□□□ 0.28
USP35-204ENST00000530267 PSME4Q14997 1843 aa16.77■□□□□ 0.27
USP35-204ENST00000530267 PIK3CDO00329 1044 aa16.77■□□□□ 0.27
USP35-204ENST00000530267 CYLC1P35663 651 aaPredicted RBP16.77■□□□□ 0.27
USP35-204ENST00000530267 CCDC42Q96M95 316 aa16.77■□□□□ 0.27
USP35-204ENST00000530267 AGBL1Q96MI9 1066 aa16.77■□□□□ 0.27
USP35-204ENST00000530267 RUSC1Q9BVN2 902 aa16.77■□□□□ 0.27
USP35-204ENST00000530267 MYOZ2Q9NPC6 264 aa16.77■□□□□ 0.27
USP35-204ENST00000530267 LRRC53A6NM62 1247 aa16.76■□□□□ 0.27
USP35-204ENST00000530267 CHMP4BP1P59074 171 aa16.76■□□□□ 0.27
USP35-204ENST00000530267 ADAM9Q13443 819 aa16.76■□□□□ 0.27
USP35-204ENST00000530267 GRIPAP1Q4V328 841 aa16.76■□□□□ 0.27
USP35-204ENST00000530267 LRCH2Q5VUJ6 765 aa16.76■□□□□ 0.27
USP35-204ENST00000530267 LDHDQ86WU2 507 aa16.76■□□□□ 0.27
USP35-204ENST00000530267 SYT2Q8N9I0 419 aaPredicted RBP16.76■□□□□ 0.27
USP35-204ENST00000530267 RANBP17Q9H2T7 1088 aaKnown RBP16.76■□□□□ 0.27
USP35-204ENST00000530267 NLRC4Q9NPP4 1024 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms