RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ZBTB42B2RXF5 422 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 H3BML4 177 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 TGM5O43548 720 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 NCK2O43639 380 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 CLEC3AO75596 197 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 MTA2O94776 668 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 SNRPB2P08579 225 aaKnown RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 FAM157BP0CG42 384 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 CD247P20963 164 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 OAS2P29728 719 aaKnown RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 GPLD1P80108 840 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 ROR1Q01973 937 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 ICA1Q05084 483 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 BLMHQ13867 455 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 SEPT2Q15019 361 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 DBN1Q16643 649 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 TMEM177Q53S58 311 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 C4orf50Q6ZRC1 276 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 RAB44Q7Z6P3 723 aaPredicted RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 ZC3H7AQ8IWR0 971 aaKnown RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 ARHGEF39Q8N4T4 335 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 CRACR2BQ8N4Y2 399 aaPredicted RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 DDX54Q8TDD1 881 aaKnown RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 GOLGA1Q92805 767 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 USP13Q92995 863 aaPredicted RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 BHMTQ93088 406 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 TSPAN18Q96SJ8 248 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 BARD1Q99728 777 aaKnown RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 TTLL2Q9BWV7 592 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 ITM2CQ9NQX7 267 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 ANKEF1Q9NU02 776 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 IFT80Q9P2H3 777 aaPredicted RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 ARHGAP28Q9P2N2 729 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 CGGBP1Q9UFW8 167 aaPredicted RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 ACAD8Q9UKU7 415 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 MAGED1Q9Y5V3 778 aaPredicted RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 FAM170AA1A519 330 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 PTPDC1A2A3K4 754 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 GOLGA8AA7E2F4 631 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 GOLGA8BA8MQT2 603 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 ARVCFO00192 962 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 EIF3FO00303 357 aaPredicted RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 TOR1BO14657 336 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 KPNA5O15131 536 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 SHOXO15266 292 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 B3GALT2O43825 422 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 PLOD3O60568 738 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 MAFKO60675 156 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 SMNDC1O75940 238 aaKnown RBP eCLIP4.73□□□□□ -1.65
SKP1-209ENST00000522552 ECEL1O95672 775 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 CKMP06732 381 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 DHRS4L1P0CG22 281 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 YBX3P16989 372 aaKnown RBP eCLIP4.73□□□□□ -1.651e-12■■□□□ 13.5
SKP1-209ENST00000522552 NAT1P18440 290 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 HOXC12P31275 282 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 HOXD12P35452 270 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 CLK1P49759 484 aaKnown RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 YARSP54577 528 aaKnown RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 ADKP55263 362 aaKnown RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 PFKPQ01813 784 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 SPEM2Q0P670 501 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 ANKRD39Q53RE8 183 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 SLC45A4Q5BKX6 768 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 RNF220Q5VTB9 566 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 DENND5AQ6IQ26 1287 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 BRINP3Q76B58 766 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 SV2AQ7L0J3 742 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 SNX32Q86XE0 403 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 DENND1CQ8IV53 801 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 MCATQ8IVS2 390 aaKnown RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 EFHBQ8N7U6 833 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 LSMEM1Q8N8F7 131 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 DCAF4Q8WV16 495 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 GTPBP3Q969Y2 492 aaKnown RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 ZNF837Q96EG3 531 aaPredicted RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 CCDC140Q96MF4 163 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 CELF4Q9BZC1 486 aaKnown RBP4.73□□□□□ -1.65
SKP1-209ENST00000522552 NUP62CLQ9H1M0 184 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 NKX2-4Q9H2Z4 354 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 OXSMQ9NWU1 459 aa4.73□□□□□ -1.65
SKP1-209ENST00000522552 DCDC2BA2VCK2 349 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 TIPRLO75663 272 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 UBXN7O94888 489 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 INMTO95050 263 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 F11P03951 625 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 SCG5P05408 212 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 FAM200BP0CF97 657 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 VSIG8P0DPA2 414 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 C5AR1P21730 350 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 RPS6KB1P23443 525 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 KRT20P35900 424 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 UBA7P41226 1012 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 ECI1P42126 302 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 CASP5P51878 434 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 CACNB3P54284 484 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 ETF1P62495 437 aaKnown RBP4.72□□□□□ -1.65
SKP1-209ENST00000522552 KRT76Q01546 638 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 CYP4F3Q08477 520 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 IKBKEQ14164 716 aa4.72□□□□□ -1.65
SKP1-209ENST00000522552 CLEC16AQ2KHT3 1053 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms